Long-distance Movement Research Articles

Comparison of the rookery connectivity and migratory connectivity: insight into movement and colonization of the green turtle (Chelonia mydas) in Pacific–Southeast Asia

Integration of the rookery connectivity, which includes historical connections among rookeries, and migratory connectivity assessing dispersal or migratory routes of marine animals are important for understanding dispersal and/or migration and its effect on the formation of genetic population structure. The migratory nature and long-distance movement of sea turtles have been reported, while natal philopatry has been suggested by genetic differentiation among rookeries within a relatively narrow geographic scale. Therefore, we hypothesize that contemporary long-distance movement has a limited effect on colonization in new rookeries. This study compared the genetic relationships among rookeries and between the rookeries and foraging grounds of green turtles (Chelonia mydas) in Southeast Asia. Mitochondrial control region sequences of 333 turtles from 11 rookeries were newly determined, and combination with previously reported Indo-Pacific rookeries indicated the presence of a genetic barrier in the Torres Strait and Celebes Sea (i.e. Philippines–Sulawesi). On the other hand, an analysis of newly collected 107 turtles from seven foraging sites and mixed stock analyses indicated contemporary movement across this historical genetic barrier, from Micronesian rookeries to foraging grounds in the Celebes Sea (i.e. Sipadan Island and Tun Sakaran Marine Park). Isolation by distance was generally supported for relationships among rookeries, and the high migratory connectivity did not result in a lower genetic distance between rookeries than predicted from geographic distance. Differences between rookery connectivity and migratory connectivity in green turtles in Southeast Asia are likely due to migration to natal regions after long-distance movement.

Oxygen-vacancy-related dielectric relaxation behaviours and impedance spectroscopy of Bi(Mg1/2Ti1/2)O3 modified BaTiO3 ferroelectric ceramics

Lead-free ferroelectric ceramics (1-x) BaTiO3–xBi(Mg1/2Ti1/2)O3 (x = 0.0–0.07) were synthesized by conventional solid state reaction method and the correlation of structure, dielectric, ferroelectric and impedance properties were investigated. It was found that Tm and εm showed decreasing trend with the increase of BMT content. The high-temperature dielectric relaxation behaviour was observed in all the samples. The activation energy calculated from impedance (Ea) and conductivity (Econd), which revealed that the relaxation behaviours were linked with the migration of OVs. The values of Ea were almost equivalent to Econd. It was concluded that the short-range hopping of oxygen vacancy contributed to the dielectric relaxation and long-distance movement of doubly ionized oxygen vacancies contributed to the conduction. On the other hand, with increasing BMT contents, it was found that P-E loops became slimmer and slimmer, which indicated the increase of relaxor behaviour. The temperature dependence of P-E loops for 0.98BT–0.02BMT ceramic clearly showed the transition process from ferroelectric to relaxed ferroelectrics.

Migratory behaviour predicts greater parasite diversity in ungulates.

Long-distance animal movements can increase exposure to diverse parasites, but can also reduce infection risk through escape from contaminated habitats or culling of infected individuals. These mechanisms have been demonstrated within and between populations in single-host/single-parasite interactions, but how long-distance movement behaviours shape parasite diversity and prevalence across host taxa is largely unknown. Using a comparative approach, we analyse the parasite communities of 93 migratory, nomadic and resident ungulate species. We find that migrants have higher parasite species richness than residents or nomads, even after considering other factors known to influence parasite diversity, such as body size and host geographical range area. Further analyses support a novel 'environmental tracking' hypothesis, whereby migration allows parasites to experience environments favourable to transmission year-round. In addition, the social aggregation and large group sizes that facilitate migration might increase infection risk for migrants. By contrast, we find little support for previously proposed hypotheses, including migratory escape and culling, in explaining the relationship between host movement and parasitism in mammals at this cross-species scale. Our findings, which support mechanistic links between long-distance movement and increased parasite richness at the species level, could help predict the effects of future environmental change on parasitism in migratory animals.

Beet Necrotic Yellow Vein Virus Noncoding RNA Production Depends on a 5'→3' Xrn Exoribonuclease Activity.

The RNA3 species of the beet necrotic yellow vein virus (BNYVV), a multipartite positive-stranded RNA phytovirus, contains the ‘core’ nucleotide sequence required for its systemic movement in Beta macrocarpa. Within this ‘core’ sequence resides a conserved “coremin” motif of 20 nucleotides that is absolutely essential for long-distance movement. RNA3 undergoes processing steps to yield a noncoding RNA3 (ncRNA3) possessing “coremin” at its 5′ end, a mandatory element for ncRNA3 accumulation. Expression of wild-type (wt) or mutated RNA3 in Saccharomyces cerevisiae allows for the accumulation of ncRNA3 species. Screening of S. cerevisiae ribonuclease mutants identified the 5′-to-3′ exoribonuclease Xrn1 as a key enzyme in RNA3 processing that was recapitulated both in vitro and in insect cell extracts. Xrn1 stalled on ncRNA3-containing RNA substrates in these decay assays in a similar fashion as the flavivirus Xrn1-resistant structure (sfRNA). Substitution of the BNYVV-RNA3 ‘core’ sequence by the sfRNA sequence led to the accumulation of an ncRNA species in yeast in vitro but not in planta and no viral long distance occurred. Interestingly, XRN4 knockdown reduced BNYVV RNA accumulation suggesting a dual role for the ribonuclease in the viral cycle.

Evidence of a configurational structure in Meskwaki

Meskwaki, like many polysynthetic Algonquian languages, is often analyzed as having a non-configurational structure because it exhibits the three core characteristics of non-configurationality: free word order, discontinuous expressions, and null anaphora (Hale 1983). While free surface form word order is attributed to a preverbal discourse-based hierarchy, non-topic/focus NPs are in a post-verbal, non-hierarchical XP structure (Dahlstrom in progress). This paper posits that Meskwaki has an underlying configurational syntactic structure based on novel and prior data showing (1) discontinuous NP ordering restrictions with locality constraints, (2) superiority effects in multiple wh-phrases, and (3) long-distance movement and island effects.

Octapartite negative-sense RNA genome of High Plains wheat mosaic virus encodes two suppressors of RNA silencing

High Plains wheat mosaic virus (HPWMoV, genus Emaravirus; family Fimoviridae), transmitted by the wheat curl mite (Aceria tosichella Keifer), harbors a monocistronic octapartite single-stranded negative-sense RNA genome. In this study, putative proteins encoded by HPWMoV genomic RNAs 2–8 were screened for potential RNA silencing suppression activity by using a green fluorescent protein-based reporter agroinfiltration assay. We found that proteins encoded by RNAs 7 (P7) and 8 (P8) suppressed silencing induced by single- or double-stranded RNAs and efficiently suppressed the transitive pathway of RNA silencing. Additionally, a Wheat streak mosaic virus (WSMV, genus Tritimovirus; family Potyviridae) mutant lacking the suppressor of RNA silencing (ΔP1) but having either P7 or P8 from HPWMoV restored cell-to-cell and long-distance movement in wheat, thus indicating that P7 or P8 rescued silencing suppressor-deficient WSMV. Furthermore, HPWMoV P7 and P8 substantially enhanced the pathogenicity of Potato virus X in Nicotiana benthamiana. Collectively, these data demonstrate that the octapartite genome of HPWMoV encodes two suppressors of RNA silencing.

Evidence of repeated long-distance movements by lake charr Salvelinus namaycush in Lake Huron

Movements and dispersal distances of acoustically-tagged adult lake charr Salvelinus namaycush were estimated based on detections at acoustic receivers in Lake Huron during 2010–2014. Most lake charr were detected only at receivers proximate to their release location or were not detected at all, but 3–9% of tagged lake charr were detected at receivers located over 100 km from their release location. Several fish made extensive repeated migrations within the lake, some at the scale of the entire main basin. Our observations show that some lake charr individuals repeat a similar pattern each year of moving long distances, and some fish were observed to show annual fidelity to presumed foraging sites in the spring at a spatial scale of approximately 200 km. Our telemetry-based estimates were minimum estimates of dispersal, as the placement of receivers within Lake Huron was not optimal for detection of lake charr and did not cover the majority of the lake. Further study of long-distance movement in lake charr is necessary to fully understand the implications of this behavior to lake charr ecology, population dynamics, and management in the Great Lakes.

Potato Mop-Top Virus Co-Opts the Stress Sensor HIPP26 for Long-Distance Movement.

Virus movement proteins facilitate virus entry into the vascular system to initiate systemic infection. The potato mop-top virus (PMTV) movement protein, TGB1, is involved in long-distance movement of both viral ribonucleoprotein complexes and virions. Here, our analysis of TGB1 interactions with host Nicotiana benthamiana proteins revealed an interaction with a member of the heavy metal-associated isoprenylated plant protein family, HIPP26, which acts as a plasma membrane-to-nucleus signal during abiotic stress. We found that knockdown of NbHIPP26 expression inhibited virus long-distance movement but did not affect cell-to-cell movement. Drought and PMTV infection up-regulated NbHIPP26 gene expression, and PMTV infection protected plants from drought. In addition, NbHIPP26 promoter-reporter fusions revealed vascular tissue-specific expression. Mutational and biochemical analyses indicated that NbHIPP26 subcellular localization at the plasma membrane and plasmodesmata was mediated by lipidation (S-acylation and prenylation), as nonlipidated NbHIPP26 was predominantly in the nucleus. Notably, coexpression of NbHIPP26 with TGB1 resulted in a similar nuclear accumulation of NbHIPP26. TGB1 interacted with the carboxyl-terminal CVVM (prenyl) domain of NbHIPP26, and bimolecular fluorescence complementation revealed that the TGB1-HIPP26 complex localized to microtubules and accumulated in the nucleolus, with little signal at the plasma membrane or plasmodesmata. These data support a mechanism where interaction with TGB1 negates or reverses NbHIPP26 lipidation, thus releasing membrane-associated NbHIPP26 and redirecting it via microtubules to the nucleus, thereby activating the drought stress response and facilitating virus long-distance movement.

Fine-scale landscape genomics helps explain the slow spatial spread of Wolbachia through the Aedes aegypti population in Cairns, Australia.

The endosymbiotic bacterium Wolbachia suppresses the capacity for arbovirus transmission in the mosquito Aedes aegypti, and can spread spatially through wild mosquito populations following local introductions. Recent introductions in Cairns, Australia have demonstrated slower than expected spatial spread. Potential reasons for this include: (i) barriers to Ae. aegypti dispersal; (ii) higher incidence of long-range dispersal; and (iii) intergenerational loss of Wolbachia. We investigated these three potential factors using genome-wide single-nucleotide polymorphisms (SNPs) and an assay for the Wolbachia infection wMel in 161 Ae. aegypti collected from Cairns in 2015. We detected a small but significant barrier effect of Cairns highways on Ae. aegypti dispersal using distance-based redundancy analysis and patch-based simulation analysis. We detected a pair of putative full-siblings in ovitraps 1312 m apart, indicating long-distance female movement likely mediated by human transport. We also found a pair of full-siblings of different infection status, indicating intergenerational loss of Wolbachia in the field. These three factors are all expected to contribute to the slow spread of Wolbachia through Ae. aegypti populations, though from our results it is unclear whether Wolbachia loss and long-distance movement are sufficiently common to reduce the speed of spatial spread appreciably. Our findings inform the strategic deployment of Wolbachia-infected mosquitoes during releases, and show how parameter estimates from laboratory studies may differ from those estimated using field data. Our landscape genomics approach can be extended to other host/symbiont systems that are being considered for biocontrol.

The 96th Amino Acid of the Coat Protein of Cucumber Green Mottle Mosaic Virus Affects Virus Infectivity.

Cucumber green mottle mosaic virus (CGMMV) is one of the most devastating viruses infecting members of the family Cucurbitaceae. The assembly initiation site of CGMMV is located in the coding region of the coat protein, which is not only involved in virion assembly but is also a key factor determining the long-distance movement of the virus. To understand the effect of assembly initiation site and the adjacent region on CGMMV infectivity, we created a GTT deletion mutation in the GAGGTTG assembly initiation site of the infectious clone of CGMMV, which we termed V97 (deletion mutation at residue 97 of coat protein), followed by the construction of the V94A and T104A mutants. We observed that these three mutations caused mosaic after Agrobacterium-mediated transformation in Nicotiana benthamiana, albeit with a significant delay compared to the wild type clone. The mutants also had a common spontaneous E96K mutation in the coat protein. These results indicated that the initial assembly site and the sequence of the adjacent region affected the infectivity of the virus and that E96 might play an essential role in this process. We constructed two single point mutants—E96A and E96K—and three double mutants—V94A-E96K, V97-E96K and T104A-E96K—to further understand the role of E96 in CGMMV pathogenesis. After inoculation in N. benthamiana, E96A showed delayed systemic symptoms, but the E96K and three double mutants exhibited typical symptoms of mosaic at seven days post-infection. Then, sap from CGMMV-infected N. benthamiana leaves was mechanically inoculated on watermelon plants. We confirmed that E96 affected CGMMV infection using double antibody sandwich-enzyme-linked immunosorbent assay (DAS-ELISA), reverse transcription-polymerase chain reaction (RT-PCR), and sequencing, which further confirmed the successful infection of the related mutants, and that E96K can compensate the effect of the V94, V97, and T104 mutations on virus infectivity. In addition, Northern blotting showed that the accumulation of viral RNA corroborated the severity of the symptoms.

Phylogenetics of a Fungal Invasion: Origins and Widespread Dispersal of White-Nose Syndrome.

ABSTRACTGlobalization has facilitated the worldwide movement and introduction of pathogens, but epizoological reconstructions of these invasions are often hindered by limited sampling and insufficient genetic resolution among isolates. Pseudogymnoascus destructans, a fungal pathogen causing the epizootic of white-nose syndrome in North American bats, has exhibited few genetic polymorphisms in previous studies, presenting challenges for both epizoological tracking of the spread of this fungus and for determining its evolutionary history. We used single nucleotide polymorphisms (SNPs) from whole-genome sequencing and microsatellites to construct high-resolution phylogenies of P. destructans. Shallow genetic diversity and the lack of geographic structuring among North American isolates support a recent introduction followed by expansion via clonal reproduction across the epizootic zone. Moreover, the genetic relationships of isolates within North America suggest widespread mixing and long-distance movement of the fungus. Genetic diversity among isolates of P. destructans from Europe was substantially higher than in those from North America. However, genetic distance between the North American isolates and any given European isolate was similar to the distance between the individual European isolates. In contrast, the isolates we examined from Asia were highly divergent from both European and North American isolates. Although the definitive source for introduction of the North American population has not been conclusively identified, our data support the origin of the North American invasion by P. destructans from Europe rather than Asia.

New splicing variants of mitochondrial Rho GTPase-1 (Miro1) transport peroxisomes.

Microtubule-dependent long-distance movement of peroxisomes occurs in mammalian cells. However, its molecular mechanisms remain undefined. In this study, we identified three distinct splicing variants of human mitochondrial Rho GTPase-1 (Miro1), each containing amino acid sequence insertions 1 (named Miro1-var2), 2 (Miro1-var3), and both 1 and 2 (Miro1-var4), respectively, at upstream of the transmembrane domain. Miro1-var4 and Miro1-var2 are localized to peroxisomes in a manner dependent on the insertion 1 that is recognized by the cytosolic receptor Pex19p. Exogenous expression of Miro1-var4 induces accumulation of peroxisomes at the cell periphery and augments long-range movement of peroxisomes along microtubules. Depletion of all Miro1 variants by knocking down MIRO1 suppresses the long-distance movement of peroxisomes. Such abrogated movement is restored by reexpression of peroxisomal Miro1 variants. Collectively, our findings identify for the first time peroxisome-localized Miro1 variants as adapter proteins that link peroxisomes to the microtubule-dependent transport complexes including TRAK2 in the intracellular translocation of peroxisomes in mammalian cells.

The role of plant hormones during grafting

For millennia, people have cut and joined different plant tissues together through a process known as grafting. By creating a chimeric organism, desirable properties from two plants combine to enhance disease resistance, abiotic stress tolerance, vigour or facilitate the asexual propagation of plants. In addition, grafting has been extremely informative in science for studying and identifying the long-distance movement of molecules. Despite its increasing use in horticulture and science, how plants undertake the process of grafting remains elusive. Here, we discuss specifically the role of eight major plant hormones during the wound healing and vascular formation process, two phenomena involved in grafting. We furthermore present the roles of these hormones during graft formation and highlight knowledge gaps and future areas of interest for the field of grafting biology.

Emergence phenology, uncertainty, and the evolution of migratory behavior in Anax junius (Odonata: Aeshnidae).

Mass migrations by Odonata, although less studied than those of Monarch butterflies and plague locusts, have provoked comment and study for many years. Relatively recently, increasing interest in dragonflies, supported by new technologies, has resulted in more detailed knowledge of the species involved, behavioral mechanisms, and geographic extent. In this paper we examine, in four independent but complementary studies, how larval habitat and emergence phenology interact with climate to shape the evolution of migratory strategy in Anax junius, a common species throughout much of the eastern United States and southern Canada. In brief, we argue that fish predation on larvae, coupled with the need for ample emergent vegetation for oviposition and adult eclosion, dictates that larval development and survival is optimal in ponds that are neither permanent nor extremely ephemeral. Coupled with annual variation in regional weather and winters in much of their range too cold for adult survival, conditions facing newly emerged A. junius may unpredictably favor either local reproduction or long-distance movement to more favorable areas. Both temperature and hydroperiod tend to favor local reproduction early in the adult activity period and migration later, so late emerging adults are more likely to migrate. No single pond is always predictably suitable or unsuitable, however, so ovipositing females also may spread the risk to their offspring by ovipositing at multiple sites that, for migrants, may be distributed over very long distances.

Wintering ecology and nomadic movement patterns of Short-eared Owls Asio flammeus on a subtropical island

ABSTRACTCapsule: Short-eared Owls Asio flammeus showed a female-biased sex ratio in their southernmost wintering grounds in Oriental Asia. This is the first description of a nomadic movement pattern in this area.Aims: To investigate the sex ratio, movement patterns, home range size and habitat preference of non-breeding Short-eared Owls in subtropical Taiwan.Methods: Eleven Short-eared Owls were radio tracked following trapping and transportation away from an airport as part of the management of bird-strike risk for aeroplanes.Results: Our results indicated a female-skewed (75%) sex ratio for Short-eared Owls wintering in Taiwan. The owls demonstrated a nomadic behaviour by showing a repetitive pattern of high roosting site fidelity in the short term, followed by a long-distance movement to a different discrete area. Grasslands were commonly used as day-roosting sites but agricultural habitats were favoured at night.Conclusion: Compared to on the breeding ground, the wintering owls exhibited a much larger home range size and exploit more dispersed patches of suitable habitats. These results revealed a notable conservation issue for the wintering owls, especially in the degraded and partially developed landscapes in subtropical countries.

Remotely sensed wind speed predicts soaring behaviour in a wide-ranging pelagic seabird.

Global wind patterns affect flight strategies in many birds, including pelagic seabirds, many of which use wind-powered soaring to reduce energy costs during at-sea foraging trips and migration. Such long-distance movement patterns are underpinned by local interactions between wind conditions and flight behaviour, but these fine-scale relationships are far less well understood. Here we show that remotely sensed ocean wind speed and direction are highly significant predictors of soaring behaviour in a migratory pelagic seabird, the Manx shearwater (Puffinus puffinus). We used high-frequency GPS tracking data (10 Hz) and statistical behaviour state classification to identify two energetic modes in at-sea flight, corresponding to flap-like and soar-like flight. We show that soaring is significantly more likely to occur in tailwinds and crosswinds above a wind speed threshold of around 8 m s-1, suggesting that these conditions enable birds to reduce metabolic costs by preferentially soaring over flapping. Our results suggest a behavioural mechanism by which wind conditions may shape foraging and migration ecology in pelagic seabirds, and thus indicate that shifts in wind patterns driven by climate change could impact this and other species. They also emphasize the emerging potential of high-frequency GPS biologgers to provide detailed quantitative insights into fine-scale flight behaviour in free-living animals.

Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated

SummaryCytoplasmic dynein-1 binds dynactin and cargo adaptor proteins to form a transport machine capable of long-distance processive movement along microtubules. However, it is unclear why dynein-1 moves poorly on its own or how it is activated by dynactin. Here, we present a cryoelectron microscopy structure of the complete 1.4-megadalton human dynein-1 complex in an inhibited state known as the phi-particle. We reveal the 3D structure of the cargo binding dynein tail and show how self-dimerization of the motor domains locks them in a conformation with low microtubule affinity. Disrupting motor dimerization with structure-based mutagenesis drives dynein-1 into an open form with higher affinity for both microtubules and dynactin. We find the open form is also inhibited for movement and that dynactin relieves this by reorienting the motor domains to interact correctly with microtubules. Our model explains how dynactin binding to the dynein-1 tail directly stimulates its motor activity.

Long-Distance Movement of a Female Polar Bear from Canada to Russia

Polar bears (Ursus maritimus) display fidelity to large geographic regions, and their movements are influenced by sea ice distribution. Polar bear subpopulations are moderately distinct from one another, and long-distance movements between subpopulations are rare. We describe and analyze the movements of a female polar bear tracked by satellite telemetry from spring 2009 for 798 days. This female traveled an exceptionally long distance (totaling 11 686 km) from the sea ice off the Yukon Territory, Canada (Southern Beaufort Sea subpopulation) to Wrangel Island, Russia (Chukchi Sea subpopulation). In comparison to other polar bears in this study, this bear traveled farther, moved faster, and had a much larger home range in the first year. Furthermore, the calculation of the home range size by two different methods demonstrated that the commonly used minimum convex polygon method overestimated the home range compared to the less biased Brownian bridge movement model. This female’s long-distance movement was unusual and provides additional evidence for gene flow between subpopulations. Monitoring polar bear movements is useful to track such events, which is especially important at present because sea ice loss due to climate change can affect subpopulation boundaries and influence management.

Characterizing and quantifying human movement patterns using GPS data loggers in an area approaching malaria elimination in rural southern Zambia.

In areas approaching malaria elimination, human mobility patterns are important in determining the proportion of malaria cases that are imported or the result of low-level, endemic transmission. A convenience sample of participants enrolled in a longitudinal cohort study in the catchment area of Macha Hospital in Choma District, Southern Province, Zambia, was selected to carry a GPS data logger for one month from October 2013 to August 2014. Density maps and activity space plots were created to evaluate seasonal movement patterns. Time spent outside the household compound during anopheline biting times, and time spent in malaria high- and low-risk areas, were calculated. There was evidence of seasonal movement patterns, with increased long-distance movement during the dry season. A median of 10.6% (interquartile range (IQR): 5.8–23.8) of time was spent away from the household, which decreased during anopheline biting times to 5.6% (IQR: 1.7–14.9). The per cent of time spent in malaria high-risk areas for participants residing in high-risk areas ranged from 83.2% to 100%, but ranged from only 0.0% to 36.7% for participants residing in low-risk areas. Interventions targeted at the household may be more effective because of restricted movement during the rainy season, with limited movement between high- and low-risk areas.

Inferring stratified parasitoid dispersal mechanisms and parameters from coarse data using mathematical and Bayesian methods.

Biological invasions have movement at the core of their success. However, due to difficulties in collecting data, medium- and long-distance dispersal of small insects has long been poorly understood and likely to be underestimated. The agricultural release of parasitic hymenoptera, a group of wasps that are critical for biological pest control, represents a rare opportunity to study the spread of insects on multiple spatial scales. As these insects are typically less than 1 mm in size and are challenging to track individually, a first-time biocontrol release will provide a known spatial position and time of initial release for all individuals that are subsequently collected. In this paper, we develop and validate a new mathematical model for parasitoid wasp dispersal from point release, as in the case of biocontrol. The model is derived from underlying stochastic processes but is fully deterministic and admits an analytical solution. Using a Bayesian framework, we then fit the model to an Australian dataset describing the multi-scale wind-borne dispersal pattern of Eretmocerus hayati Zolnerowich & Rose (Hymenoptera: Aphelinidae). Our results confirm that both local movements and long-distance wind dispersal are significant to the movement of parasitoids. The model results also suggest that low velocity winds are the primary indicator of dispersal direction on the field scale shortly after release, and that average wind data may be insufficient to resolve long-distance movement given inherent nonlinearities and heterogeneities in atmospheric flows. The results highlight the importance of collecting wind data when developing models to predict the spread of parasitoids and other tiny organisms.