Local Habitat Research Articles

Bees in the city: Findings from a scoping review and recommendations for urban planning.

Over the last decades, bee biodiversity has dropped sharply due to land use change, including urbanization. To contrast this, recent research has pointed to cities as a hotspot for bees. Because of this ambiguity, a scoping review has been conducted to examine the urban characteristics that impact bees and how bees are impacted. A total of 276 articles were analyzed against landscape and local habitat characteristics. The key findings include first that natural areas are more valuable for bees since biodiversity levels are higher. Second, urban areas generally score better than agricultural and rural areas. Third, plant biodiversity positively influences bee biodiversity. Fourth, the urban environment strongly affects some bee traits and the proportion of native bees. For making cities bee friendly and bee inclusive, we recommend to maintain natural areas, connect natural areas to urban ecosystems, encourage floral abundance and diversity and increasing the size of urban green areas overall.

The effect of local habitat and spatial connectivity on urban seed predation.

During the last centuries, the area covered by urban landscapes is increasing all over the world. Urbanization can change local habitats and decrease connectivity among these habitats, with important consequences for species interactions. While several studies have found a major imprint of urbanization on plant-insect interactions, the effects of urbanization on seed predation remain largely unexplored. We investigated the relative impact of sunlight exposure, leaf litter, and spatial connectivity on predation by moth and weevil larvae on acorns of the pedunculate oak across an urban landscape during 2018 and 2020. We also examined whether infestations by moths and weevils were independent of each other. While seed predation varied strongly among trees, seed predation was not related to differences in sunlight exposure, leaf litter, or spatial connectivity. Seed predation by moths and weevils was negatively correlated at the level of individual acorns in 2018, but positively correlated at the acorn and the tree level in 2020. Our study sets the baseline expectation that urban seed predators are unaffected by differences in sunlight exposure, leaf litter, and spatial connectivity. Overall, our findings suggest that the impact of local and spatial factors on insects within an urban context may depend on the species guild. Understanding the impact of local and spatial factors on biodiversity, food web structure, and ecosystem functioning can provide valuable insights for urban planning and management strategies aimed at promoting urban insect diversity.

Hydric environment and chemical composition shape non-avian reptile eggshell absorption.

The amniotic egg fulfils a critical role in reproduction by serving as an interface between the external environment and the embryo. Because non-avian reptiles are rarely incubated, they must be heated by, and absorb water from, the oviposition site for the developing embryo. The mechanisms by which they absorb sufficient, but not excess, water and how these mechanisms vary with local habitat is largely unknown, despite its significance to their evolution. Here, we first performed histology, Fourier transform infra-red spectroscopy and dynamic vapor sorption experiments to elucidate the mechanisms of eggshell absorption for 56 reptile species. Then, we used phylogenetic comparative analyse to test the hypothesis that absorptive capacity of reptile eggshells increases with aridity of the environment. We found that water absorption increases in the presence of a superficial mucopolysaccharide layer and decreases with increased calcium content. We found that eggs from arid environments have highly absorbent eggshells, but only in species with weakly calcified shells. Our results suggest that reptile eggshells have over evolutionary time tuned absorptive capacity to environmental moisture level. Since these eggs often must sustain conflicting constraints, they may serve as inspirations for new biomimetic materials, such as water filtering membranes or humidity sensors.

The State of Knowledge of CCA Diversity in the Caribbean Coral Reefs

Crustose coralline algae (CCA) are a diverse and ecologically important species found in most of the world’s oceans. The current lack of taxonomic knowledge and relative abundance compromises our ability to predict species diversity numbers and, thus, their ecological roles and impacts on coral reefs. To gather a better understanding of the state of knowledge of crustose coralline algae taxonomy in the Caribbean, 107 different research papers, and other primary and secondary literature were studied; any source with taxonomical information, species identification, or genetic markers for identification was recorded. All Genebank codes were collected and sorted by supposed species marker and then ran through the National Center of Biotechnology Information. The location these genetic markers were gathered from was compared to the natural habitat range of the species, based on the Algaebank habitat description. Of the supposed 83 described species of crustose algae in the Caribbean, based on morphological characteristics, only 24 total were confirmed by DNA markers. This leaves at least 59 species of CCA to be confirmed in the Caribbean Sea with molecular markers. This indicates the importance of DNA barcode survey studies to assess the accurate diversity of this group in the region. With this limited knowledge apparent, it should be seen that a CCAs phylogenetic and taxonomical review must be done. An in-depth assessment should be conducted on CCA collections to identify the Caribbean species correctly and thus know their biodiversity in local habitats.

Winter-ground microhabitat use by differently coloured phenotypes affects return rate in a long-distance migratory bird.

Migratory bird populations are declining globally at alarming rates. Non-breeding site conditions affect breeding populations, but generalising non-breeding habitat conditions over large spatial regions cannot address potential fine-scale differences across landscapes or local populations. Plumage characteristics can mediate the effects of environmental conditions on individual fitness. However, whether different phenotypes use distinctive non-breeding sites, and whether they respond to non-breeding site conditions differently remains largely unknown. Stable isotopes (δ13C, δ15N, δ2H) of inert tissues are useful to infer habitat characteristics and geographic origins where those tissues were grown. We collected winter-grown feathers from pied flycatchers (Ficedula hypoleuca) on their breeding grounds over several years from males whose dorsal plumage colouration ranged continuously from brown to black and assessed their stable isotope values as proxies of local habitat conditions. Based on feather δ2H profiles we found that browner males spent their non-breeding season in drier habitats than black males. Assignment to origin analysis shows potential regional non-breeding ground separation between differently coloured males. High within-individual repeatability of both δ13C and δ15N indicate the pied flycatcher males return yearly to similar areas. Blacker males were more likely to return to the breeding grounds after dry years compared with brown males. The opposite was found in wet years. Our study demonstrates that different phenotypes are exposed to different non-breeding site conditions which can differentially affect individual survivorship. This has important ramifications for population dynamics under predicted climate change scenarios where especially brown phenotype pied flycatcher males may be under a risk of decreasing.

Parasite load, rather than parasite presence, decreases upstream movement in Trinidadian guppies Poecilia reticulata.

Several factors influence whether an organism remains in its local habitat. Parasites can, for example, influence host movement by impacting their behavior, physiology, and morphology. In rivers, fish that swim efficiently against the current are able to maintain their position without being displaced downstream, a behavior referred to as positive rheotaxis. We hypothesized that both the presence and number of ectoparasites on a host would affect the ability of fish to avoid downstream displacement and thus prevent them from remaining in their habitat. We used the guppy-Gyrodactylus host-ectoparasite model to test whether parasite presence and parasite load had an effect on fish rheotaxis. We quantified rheotaxis of sham-infected and parasite-infected fish in a circular flow tank in the laboratory prior to infection and 5-6 days postinfection. Both parasite-infected and sham-infected individuals expressed similar levels of positive rheotaxis prior to infection and after infection. However, with increasing parasite numbers, guppies covered less distance in the upstream direction and spent more time in slower flow zones. These results suggest that higher numbers of Gyrodactylus ectoparasites negatively influence rheotactic movements. Further research is needed to understand the ecological and evolutionary implications of this ectoparasite on fish movement.

Developing spatially explicit and stochastic measures of ecological departure

Background Ecological departure is a metric applied to mapped ecological systems measuring dissimilarity between the distributions of observed and expected proportions of non-stochastic reference vegetation classes within an area. Aims We created spatially explicit measures of ecological departure incorporating stochasticity for each ecological system and all ecological systems from a central Nevada, USA, landscape. Methods Spatially explicit ecological departures were estimated from a radius from each pixel governed by a distance-decay function within a moving window. Variability was introduced by simulating replicate climate time series for each spatial reference condition and calculating departure per replicate. Key results Single-system spatial ecological departure was high and extensive, except for one area of low-elevation groundwater-dependent systems. Variance of spatial ecological departure was extensively low, except in areas of lower ecological departure, despite vegetation differences among replicates. The multiple-system ecological departure exhibited lower values. Conclusions Spatial ecological departure is warranted for efficient land management as results were concordant between non-spatial and spatial metrics; however, rapid coding languages will be required. Implications Spatially explicit ecological departure of both single and multiple systems facilitate localised vegetation and wildlife habitat management and land protection decisions.

Identifying Important Areas for the Release of Five Endemic Species in a Mountainous Landscape: Inference from Spatial Modeling Techniques

Efforts to release animals resulting from evacuation and rehabilitation into their natural habitats are important practices in wildlife conservation. Before releasing the animals, it is important to assess the habitat suitability of the areas to support the existence of the animals in the long run. Yet, there is limited study of habitat suitability assessment on national parks as release locations for wild animals. This study aimed to assess the suitable habitat of five charismatic animal species, i.e., Panthera pardus melas, Hylobates moloch, Prinonailurus bengalensis, Nycticebus javanicus, and Nisaetus bartelsi, in Gunung Halimun Salak National Park using Maxent, and to determine potential locations for releasing animal’s species. Models for the P. p. melas show 47,619 ha and 21,391 ha, respectively, suitable as habitat and potential release location, for H. moloch, each is 57,537 ha and 33,471 ha, for P. bengalensis, each is 25,460 ha and 17.189 ha, for N. javanicus, each is 29,848 ha and 15,578 ha, and for N. bartelsi, each is 44,426 ha and 25,660 ha. Our study shows that a suitable habitat can be critical in choosing a wildlife release site. Further consideration of conflict mitigation and practicalities is required to achieve the long-term existence of released species.

Climate and habitat type interact to influence contemporary dispersal potential in Prairie Smoke (Geum triflorum).

Understanding dispersal potential, or the probability a species will move a given distance, under different environmental conditions is essential to predicting species' ability to move across the landscape and track shifting ecological niches. Two important drivers of dispersal ability are climatic differences and variations in local habitat type. Despite the likelihood these global drivers act simultaneously on plant populations, and thus dispersal potential is likely to change as a result, their combined effects on dispersal are rarely examined. To understand the effect of climate and varying habitat types on dispersal potential, we studied Geum triflorum-a perennial grassland species that spans a wide range of environments, including both prairie and alvar habitats. We explored how the climate of the growing season and habitat type (prairie vs. alvar) interact to alter dispersal potential. We found a consistent interactive effect of climate and habitat type on dispersal potential. Across prairie populations, an increased number of growing degree days favored traits that increase dispersal potential or the probability of dispersing farther distances. However, for alvar populations, dispersal potential tended to decrease as the number of growing degree days increased. Our findings suggest that under continued warming, populations in prairie habitats will benefit from increased gene flow, while alvar populations will become increasingly segregated, with reduced potential to track shifting fitness optima.

Phylogeny, biogeography and ecological diversification of New Caledonian palms (Arecaceae).

The geographic origin and evolutionary mechanisms underpinning the rich and distinctive New Caledonian flora remain poorly understood. This is due to the complex geological past of the island and to the scarcity of well-resolved species-level phylogenies. Here, we infer phylogenetic relationships and divergence times of New Caledonian palms, which comprise 40 species. We use this framework to elucidate the biogeography of New Caledonian palm lineages, and to explore how extant species may have formed. A phylogenetic tree including 37 New Caledonian palm species and 77 relatives from tribe Areceae was inferred from 151 nuclear genes obtained by targeted sequencing. Fossil-calibrated divergence times were estimated, and ancestral ranges were inferred. Ancestral and extant ecological preferences in terms of elevation, precipitation and substrate were compared between New Caledonian sister species to explore their possible roles as drivers of speciation. New Caledonian palms form four well-supported clades, inside which relationships are well resolved. Our results support the current classification, but suggest that Veillonia and Campecarpus should be resurrected, and fail to clarify whether Rhopalostylidinae is sister to or nested in Basseliniinae. New Caledonian palm lineages derive from New Guinean and Australian ancestors, which reached the island through at least three independent dispersal events between the Eocene and Miocene. Palms then dispersed out of New Caledonia at least five times, mainly towards Pacific islands. Geographic and ecological transitions associated with speciation events differed across time and genera. Substrate transitions were more frequently associated with older than younger events. Neighbouring areas and a mosaic of local habitats shaped New Caledonia's palm flora, and the island played a significant role in generating palm diversity across the Pacific region. This new spatio-temporal framework will enable population-level ecological and genetic studies to further unpick the mechanisms underpinning New Caledonian palm endemism.

Species distribution and habitat attributes guide translocation planning of a threatened short-range endemic plant

The success of plant translocations depends on defining habitat attributes critical for establishment and survival, and on locating this habitat in the landscape. We used species distribution modelling, coupled with fine-scale characterisation of local habitat attributes to characterise and identify potential sites for translocation of Tetratheca erubescens J.P.Bull (Elaeocarpaceae), a threatened shrub restricted to cliff faces on one banded ironstone range in semi-arid south-west Western Australia. Here, we 1) constructed a maximum entropy species distribution model (SDM) from known occurrence locations and environmental data, and projected this onto a broader surrounding landscape to seek suitable unoccupied habitat; 2) characterised the local habitat attributes (LHA) of both occupied and predicted but unoccupied habitat (locality types), determining potential characteristics of habitat suitability at the scale of individual plants (microsites) not captured by the landscape-scale models and; 3) assessed unoccupied areas of modelled high habitat suitability to identify ‘potential translocation sites’ that may have the characteristics to support T. erubescens. The SDM resolved two management considerations by identifying suitable habitat outside the known extent of threatened species to locate areas to search for additional natural populations (none found) or to verify as ‘potential translocation sites’ (24 sites identified). Using field surveys to assess LHA at a finer-scale, we detected differences between plant microsites and other random points in occupied habitat. As such, T. erubescens was more likely to grow in wider rock cracks, located in relatively water gaining points in the cliff profile, in soils with organic (rather than mineral) content. Our approach systematically addressed the complex challenges involved in identifying and selecting sites for translocation of a threatened plant species, a first for a semi-arid environment. We used the outcomes of this study to present a conceptual model for practitioners and regulators that outlines our approach for identifying ‘potential translocation sites’ and ranking their suitability within the context of three assessment filters: species requirements; management-operational constraints and regulatory considerations. This application is relevant to translocation programs that seek to return plant species into natural habitat areas.

Unearthing the global patterns of cultural heritage microbiome for conservation

Cultural heritage worldwide is threatened by microbial biodeterioration. However, we know very little about the global biogeography, ecology, and driving forces of these microbiomes. Here, we provide the first global ecological perspective on the microbiomes of cultural heritage by meta-analyzing ∼1000 microbiomes from contrasting environmental conditions. The results show that the bacterial communities of cultural heritage are mainly influenced by global climate (especially by precipitation patterns), while those fungal communities, dominated by saprotrophs, are largely explained by local habitat conditions. Amongst, phototrophic bacteria (e.g., Alpha-proteobacteria, and Cyanobacteria) and some saprotrophic fungi (e.g., Sordariomycetes, and Dothideomycetes) construct the backbone of the cultural heritage microbiome. In this regard, the biodeterioration of cultural heritage could be pre-estimated and predicted by the ecological calculation on the big data of global environmental conditions and microbiome. In summary, the ecological perspective of the microbiomes on global cultural heritage can help to safeguard the long-term sustainable conservation for future generations.

Volatile organic compounds emitted by Megaplatypusmutatus associated fungi: chemical identification and temperature-modulated responses by the ambrosial beetle

BackgroundIn ambrosia and bark beetles–fungi interaction, volatile organic compounds (VOCs) play a central role in mediating various aspects of community dynamics of beetles and/or fungi. These functions include facilitating beetle habitat location, mate identification, and fungal partner differentiation. However, the understanding on this context remains limited, especially in the globally distributed subfamily Platypodinae, which comprises predominantly ambrosia beetles. There is a lack of chemical data on ambrosia fungi from native South American species. This study addresses this gap by characterizing VOCs from twelve fungal species associated with Megaplatypusmutatus and assessing species-specific behavioral responses during dispersal.MethodsFungal VOCs were collected by gas chromatography–mass spectrometry combined with solid-phase microextraction and Y-olfactometry assays of males and females were performed at dispersal stage. Statistical analyses involved: non-metric multidimensional scaling multivariate plot and PERMANOVA test, a cluster analysis through unweighted pair group method with Jaccard index, and finally, a chi-square goodness-of-fit test for beetle behavioral assays.ResultsWe identified 72 VOCs from the fungal species isolated from M.mutatus galleries, exocuticle, and gut. The olfactory behavior of M.mutatus demonstrated its capacity to discriminate between volatile profiles, showing a preference for either the fungus or the control source. Our results also enhance the understanding in a chemotaxonomic context and in the behavioral responses of M.mutatus revealing the beetle's remarkable low temperature tolerance and its capability to maintain mobility and orientation toward volatile sources even after zero-degree Celsius exposure.ConclusionThis study presents a comprehensive insight into fungal VOC profiles, emphasizing the sources of isolation within pest associated fungi, as well as its symbiotic species from the Raffaelea genus. In conclusion, our findings suggest that Megaplatypusmutatus exhibits a general aversion to its fungal VOCs symbiont. However, a notable exception arises when the beetles are pre-exposed for 48 h to freezing conditions, highlighting the beetles' ability to withstand freezing conditions as adults and to exhibit altered responses to their fungal associates under these circumstances.

Evolution of migration processes in Cladocera populations

An intrinsic rate of population increase (r) in a local habitat is determined by the birth-to-death ratio and by migration processes. In natural populations, including Cladocera, r is estimated as the logarithm difference of population densities at the end and at the beginning of time interval. Under this method of evaluation, migration processes are already included in the final population density. A realized intrinsic rate of population increase (rmax) can be determined from the data on age-related mortality and fecundity by the life table method. The high regression relation (R2 = 0.867) was found between rmax, the first time of reproduction (Drepr) and mean fecundity during the reproduction period (mean_mx). Drepr is known for most of Cladocera, the mean_mx analog can be easily determined in their natural populations; these parameters can be used to evaluate a possible intrinsic rate of population increase (rcalc). The differences between r and rcalc can be used to evaluate migration processes. If these differences are positive, then individuals are emigrating from the population, if they are negative, then there occurs the influx of immigrants.

Foraging habits of Northwest Atlantic hooded seals over the past 30 years: Future habitat suitability under global warming.

The Arctic is a global warming 'hot-spot' that is experiencing rapid increases in air and ocean temperatures and concomitant decreases in sea ice cover. These environmental changes are having major consequences on Arctic ecosystems. All Arctic endemic marine mammals are highly dependent on ice-associated ecosystems for at least part of their life cycle and thus are sensitive to the changes occurring in their habitats. Understanding the biological consequences of changes in these environments is essential for ecosystem management and conservation. However, our ability to study climate change impacts on Arctic marine mammals is generally limited by the lack of sufficiently long data time series. In this study, we took advantage of a unique dataset on hooded seal (Cystophora cristata) movements (and serum samples) that spans more than 30 years in the Northwest Atlantic to (i) investigate foraging (distribution and habitat use) and dietary (trophic level of prey and location) habits over the last three decades and (ii) predict future locations of suitable habitat given a projected global warming scenario. We found that, despite a change in isotopic signatures that might suggest prey changes over the 30-year period, hooded seals from the Northwest Atlantic appeared to target similar oceanographic characteristics throughout the study period. However, over decades, they have moved northward to find food. Somewhat surprisingly, foraging habits differed between seals breeding in the Gulf of St Lawrence vs those breeding at the "Front" (off Newfoundland). Seals from the Gulf favoured colder waters while Front seals favoured warmer waters. We predict that foraging habitats for hooded seals will continue to shift northwards and that Front seals are likely to have the greatest resilience. This study shows how hooded seals are responding to rapid environmental change and provides an indication of future trends for the species-information essential for effective ecosystem management and conservation.

Genetic Basis and Evolutionary Forces of Sexually Dimorphic Color Variation in a Toad-Headed Agamid Lizard.

In the animal kingdom, sexually dimorphic color variation is a widespread phenomenon that significantly influences survival and reproductive success. However, the genetic underpinnings of this variation remain inadequately understood. Our investigation into sexually dimorphic color variation in the desert-dwelling Guinan population of the toad-headed agamid lizard (Phrynocephalus putjatai) utilized a multidisciplinary approach, encompassing phenotypic, ultrastructural, biochemical, genomic analyses, and behavioral experiments. Our findings unveil the association between distinct skin colorations and varying levels of carotenoid and pteridine pigments. The red coloration in males is determined by a genomic region on chromosome 14, housing four pigmentation genes: BCO2 and three 6-pyruvoyltetrahydropterin synthases. A Guinan population-specific nonsynonymous single nucleotide polymorphism in BCO2 is predicted to alter the electrostatic potential within the binding domain of the BCO2-β-carotene complex, influencing their interaction. Additionally, the gene MAP7 on chromosome 2 emerges as a potential contributor to the blue coloration in subadults and adult females. Sex-specific expression patterns point to steroid hormone-associated genes (SULT2B1 and SRD5A2) as potential upstream regulators influencing sexually dimorphic coloration. Visual modeling and field experiments support the potential selective advantages of vibrant coloration in desert environments. This implies that natural selection, potentially coupled with assortative mating, might have played a role in fixing color alleles, contributing to prevalence in the local desert habitat. This study provides novel insights into the genetic basis of carotenoid and pteridine-based color variation, shedding light on the evolution of sexually dimorphic coloration in animals. Moreover, it advances our understanding of the driving forces behind such intricate coloration patterns.

Local floral abundance influences bumble bee occupancy more than urban‐agricultural landscape context

Abstract Loss of natural habitat due to increases in agricultural extent raises the question of whether human‐dominated landscape types can support biodiversity, particularly for declining insect pollinators. Compared to more rural agricultural landscapes, urban areas may confer benefits for bumble bee populations by providing stable and diverse floral resources. However, disentangling the effects of local‐ and landscape‐scale characteristics on bumble bee populations in human‐modified landscapes is challenging. Here, we assessed bumble bee occupancy using a repeated transect sampling design conducted during the summers of 2019 and 2020 within the metropolitan area of Madison, WI, and the surrounding agricultural landscape. We fit hierarchical occupancy models to estimate the detection (p) and occupancy () probabilities relative to local habitat quality (floral abundance and floral richness) and landscape (agricultural‐urban gradient) features for eight bumble bee species. We hypothesised that bumble bees were more likely to occupy urban areas, serving as refugia, relative to agricultural sites. We found that the detection probability of all bumble bee species was seasonal and influenced by maximum floral abundance at survey sites, independent of the surrounding land cover type. After accounting for species‐specific detection probabilities, the effect of urbanisation on bee occupancy was weak, and no species were less likely to occupy urban than rural agricultural areas. Our findings suggest that bumble bee occupancy is associated with a ‘honeypot effect’ where local resource availability, in the form of higher floral abundance, is most important in limiting the occupancy of bumble bees across urban and agricultural landscapes.

Mosses and vascular plants show diverging diversity patterns along a latitudinal gradient in boreal bogs and fens

AbstractQuestionsThe latitudinal biodiversity gradient; i.e., the increase in biodiversity towards the equator, is one of the most prominent biodiversity patterns. Nevertheless, many questions remain to be answered about the influence of multiple environmental factors on the latitudinal biodiversity gradient, especially for mosses, and the functional diversity of mosses and vascular plants. This study aims at evaluating the influence of latitude, climate, environmental variables, and habitat types (bog vs fen) on taxonomic and functional diversity (α‐diversity and β‐diversity) and the composition of vascular plant and moss species.Location49° N to 55° N in Northwestern Quebec, Canada.TaxonMosses, vascular plants.MethodsWe used a database containing 376 phytosociological plots (400 m2) sampled in boreal peatlands located along a 600‐km latitudinal gradient. We evaluated changes in α‐diversity and β‐diversity in response to latitude, longitude, climate, and local abiotic variables for both taxonomic groups using linear mixed effect models. We evaluated the effects of these variables on taxonomic and functional composition using variance partitioning by redundancy analysis.ResultsMoss diversity increased with latitude, although the effects were masked by environmental variables, whereas vascular plant diversity decreased with latitude in fens and did not vary with latitude in bogs. We observed a decrease in taxonomic and functional uniqueness with latitude. Moss and vascular plant taxonomic and functional composition were primarily structured by contrasting local conditions in bogs and fens, whereas climatic variations along the latitudinal gradient played a secondary role.ConclusionsOur results highlight the contrasting biodiversity patterns in both peatland types and the importance of local habitat conditions in structuring vascular plant and moss diversity. These patterns varied depending on the diversity indicator used, as α‐ and β‐diversity and functional and taxonomic diversity were often decoupled. Future studies should therefore include more than one diversity indicator and consider the differences between ecosystems and taxon groups.

Integrating spatiotemporal hydrological connectivity into conservation planning to protect temporary rivers

Abstract Temporary rivers (TRs) have been largely overlooked in conservation assessments. Because TRs are such dynamic ecosystems, spatial and temporal aspects of their hydrology and ecology need to be taken into account when designing conservation plans. The aim of this paper is to propose a set of recommendations that could be useful for managers to do this, using seasonal diatom and macroinvertebrate data from north‐eastern Spain as a case study. Beta diversity was partitioned into local and species contributions to beta diversity (LCBD and SCBD). Additionally, priority conservation sites covering the spatial distribution of all species were identified using Marxan and the selection frequency (MSF) of the sites served as a measure of the relative irreplaceability of each site. Using both approaches (beta diversity and Marxan), the effects of changing spatiotemporal connectivity and habitat heterogeneity on the selection and prioritization of sites to be conserved were assessed. It was found that LCBD and MSF ranged widely both in space and time. However, LCBD and MSF were weakly related. Marxan adequately represented all taxa by selecting a few sites, while LCBD selected communities with higher differentiation but not necessarily those with rare species. In addition, SCBDs assigned low values to rare taxa, thus care must be taken when using this index for conservation planning. Spatiotemporal connectivity and local habitat heterogeneity played a critical role at the regional and local scales, driving site prioritization. Overall, we recommend: 1) monitoring multiple hydrological phases to encompass the different community types and capturing total diversity; 2) using Marxan and LCBD in combination, to benefit from their complementary insights; and 3) integrating spatiotemporal isolation and habitat heterogeneity into conservation plans, since they are the main drivers of community variation over space and time in TRs.

High effects of climate oscillations on population diversity and structure of endangered Myricaria laxiflora.

Exploring the effects of climate oscillations on the population diversity and structure of endangered organisms in the Three Gorges Reservoir (TGR) area is essential for hydrological environment changes on endangered organism evolution. Myricaria laxiflora is an endemic and endangered shrub restricted to the TGR along the banks of Yangtze River, China. Recently, six natural populations of this species were newly found upstream and downstream of the TGR, whose habitats have been dramatically changed by the summer flooding regulated by large dams. To study the water level fluctuations and climatic shifts on the genetic diversity and genetic differentiation of the six natural populations, 303 individuals from six populations were analyzed based on one nuclear DNA (ITS) and four chloroplast fragments (trnL-F, psbA-trnH, rps16, and rpl16). The phylogenetic tree and significant genetic divergence identified in the cpDNA and ITS with genetic isolation and limited gene flow among regions suggested that the six populations separated well to two groups distributed upstream and downstream. The MaxEnt modeling results indicated that obvious unidirectional eastward migration via Yangtze River gorges watercourse mediated from Last Interglacial to Last Glacial Maximum were showed with the narrow scale distributions of six remnant populations and nine extirpated populations. The initial habitat fragmentation could be triggered by the accumulation of local habitat loss of the impoundment of the TGR during the Present period and might remain stable restoration with bidirectional diffusion in the Future. Divergences among M. laxiflora populations might have been induced by the drastic changes of the external environment and limited seed/pollen dispersal capacity, as the results of long-term ecological adaptability of summer flooding stress. The haplotypes of nuclear gene could be used for population's differentiation and germplasm protection. This identified gene flow and range dynamics have provided support for the gene-flow and geology hypothesis. It is also crucial for rescuing conservation to understand the impact of environmental dynamics on endangered organism evolution.