In polymer electrolyte fuel cells (PEFCs), an enhancement of oxygen transport with excess water removal in membrane electrode assemblies can lead to better cell performance especially in high current density operation. Controlling porous structure in the catalyst layers is of great concern, satisfying these demands as well as achieving less precious catalyst loading and reduction of overpotential that are necessitated for automobile application of PEFCs. Depositing and engineering the catalyst layers have been gathering much attention intensively in these two decades [1-2]. Porous electrodes in PEFCs are generally fabricated by either coating or spraying the electrode slurry on substrate materials. Mixing, coating and drying processes of the slurry inherently affect the structural formation of the porous electrode and thus cell performance [3].In this study, we focused our attention on the inkjet printing technique as a versatile method to control catalyst layer structure. Catalyst layers (CL) with micro-grooves, which potentially provide liquid water channels in the electrodes, were fabricated by adjusting an electrode slurry injectable from a single capillary nozzle in a printing device (Fig.1). Catalyst layers made by a decal transfer technique were also prepared for comparison. The catalyst layers prepared by each method were controlled to gain the same amount of contents, i.e. platinum, ionomer and carbon, within 5% variation.Porous structure and cell polarization of each catalyst layer were examined. A two-stage ion-beam method using ion milling and focused ion beam (FIB) [4] was applied to analyze the spatial distribution of both ionomer and pore in the catalyst layers as shown in Fig.1. In this technique, a relatively wide cross-section of the CL was firstly formed by a broad ion beam and then, the ionomer impregnated in the CL was removed selectively by a focused ion beam. It was revealed that the electrode thickness was affected by fabrication methods, presumably due to mixing and coating processes. Cell performance shows its variation, depending on fabrication methods and this suggests an optimized electrode structure for further cell performance improvements. Acknowledgements This work was supported by JSPS KAKENHI Grant Number 18H01383.