Linear Prediction Method Research Articles

Estimation of noise radiance point sources multichannel direction finding systems resolution by linear prediction method

The resolution of multichannel direction finding systems of independent noise radiance point sources is estimated quantitatively under a limited learning sample on the basis of a linear prediction methods “bank” and modified Capon algorithms.

Determination of Sugar, pH, and Anthocyanin Contents in Port Wine Grape Berries through Hyperspectral Imaging: An Extensive Comparison of Linear and Non-Linear Predictive Methods

This paper presents an extended comparison study between 16 different linear and non-linear regression methods to predict the sugar, pH, and anthocyanin contents of grapes through hyperspectral imaging (HIS). Despite the numerous studies on this subject that can be found in the literature, they often rely on the application of one or a very limited set of predictive methods. The literature on multivariate regression methods is quite extensive, so the analytical domain explored is too narrow to guarantee that the best solution has been found. Therefore, we developed an integrated linear and non-linear predictive analytics comparison framework (L&NL-PAC), fully integrated with five preprocessing techniques and five different classes of regression methods, for an effective and robust comparison of all alternatives through a robust Monte Carlo double cross-validation stratified data splitting scheme. L&NLPAC allowed for the identification of the most promising preprocessing approaches, best regression methods, and wavelengths most contributing to explaining the variability of each enological parameter for the target dataset, providing important insights for the development of precision viticulture technology, based on the HSI of grape. Overall, the results suggest that the combination of the Savitzky−Golay first derivative and ridge regression can be a good choice for the prediction of the three enological parameters.

Dominant frequency component tracking of noisy time‐varying signals using the linear predictive coding pole processing method

The linear predictive coding pole processing (LPCPP) method proposed in our previous work overcomes the shortcomings of the LPC method, especially its sensitivity to noise and the filter order. The LPCPP method is a parameterised method that involves processing the LPC poles to produce a series of reduced-order filter transfer functions to estimate the dominant frequency components of a signal. This paper analyses the ability of the LPCPP method to track the frequency changes of noisy, time-varying signals in real-time. Linear chirped frequency modulation signals are used in a series of experiments to simulate signals with different rates of frequency change. The results show that the LPCPP method can achieve real-time tracking of the dominant frequency in the signal and outperforms the LPC method under different frequency change rates and different noise levels. Specifically, the valid estimate percentage of LPCPP is up to 41.3% higher than that of LPC which indicates that the LPCPP method significantly improves the validity of frequency estimates.

시계열 분석 모델을 이용한 조선 산업 주요물가의 예측에 관한 연구

Oil and steel prices, which are major pricescosts in the shipbuilding industry, were predicted. Firstly, the error of the moving average line (N=3–5) was examined, and in all three error analyses, the moving average line (N=3) was small. Secondly, in the linear prediction of data through existing theory, oil prices rise slightly, and steel prices rise sharply, but in reality, linear prediction using existing data was not satisfactory. Thirdly, we identified the limitations of linear prediction methods and confirmed that oil and steel price prediction was somewhat similar to actual moving average line prediction methods. Due to the high volatility of major price flows, large errors were inevitable in the forecast section. Through the time series analysis method at the end of this paper, we were able to achieve not bad results in all analysis items relative to artificial intelligence (Prophet). Predictive data through predictive analysis using eight predictive models are expected to serve as a good research foundation for developing unique tools or establishing evaluation systems in the future. This study compares the basic settings of artificial intelligence programs with the results of core price prediction in the shipbuilding industry through time series prediction theory, and further studies the various hyper-parameters and event effects of Prophet in the future, leaving room for improvement of predictability.

Single-step genomic evaluation with metafounders for feed conversion ratio and average daily gain in Danish Landrace and Yorkshire pigs

BackgroundThe single-step genomic best linear unbiased prediction (SSGBLUP) method is a popular approach for genetic evaluation with high-density genotype data. To solve the problem that pedigree and genomic relationship matrices refer to different base populations, a single-step genomic method with metafounders (MF-SSGBLUP) was put forward. The aim of this study was to compare the predictive ability and bias of genomic evaluations obtained with MF-SSGBLUP and standard SSGBLUP. We examined feed conversion ratio (FCR) and average daily gain (ADG) in DanBred Landrace (LL) and Yorkshire (YY) pigs using both univariate and bivariate models, as well as the optimal weighting factors (ω), which represent the proportions of the genetic variance not captured by markers, for ADG and FCR in SSGBLUP and MF-SSGBLUP.ResultsIn general, SSGBLUP and MF-SSGBLUP showed similar predictive abilities and bias of genomic estimated breeding values (GEBV). In the LL population, the predictive ability for ADG reached 0.36 using uni- or bi-variate SSGBLUP or MF-SSGBLUP, while the predictive ability for FCR was highest (0.20) for the bivariate model using MF-SSGBLUP, but differences between analyses were very small. In the YY population, predictive ability for ADG was similar for the four analyses (up to 0.35), while the predictive ability for FCR was highest (0.36) for the uni- and bi-variate MF-SSGBLUP analyses. SSGBLUP and MF-SSGBLUP exhibited nearly the same bias. In general, the bivariate models had lower bias than the univariate models. In the LL population, the optimal ω for ADG was ~ 0.2 in the univariate or bivariate models using SSGBLUP or MF-SSGBLUP, and the optimal ω for FCR was 0.70 and 0.55 for SSGBLUP and MF-SSGBLUP, respectively. In the YY population, the optimal ω ranged from 0.25 to 0. 35 for ADG across the four analyses and from 0.10 to 0.30 for FCR.ConclusionsOur results indicate that MF-SSGBLUP performed slightly better than SSGBLUP for genomic evaluation. There was little difference in the optimal weighting factors (ω) between SSGBLUP and MF-SSGBLUP. Overall, the bivariate model using MF-SSGBLUP is recommended for single-step genomic evaluation of ADG and FCR in DanBred Landrace and Yorkshire pigs.

SPEECH RECOGNITION APPLICATION AS AN ANIMATED OBJECT MOVEMENT CONTROLLER SYSTEM

Technological developments in the world have no boundaries. One of them is Speech Recognition. At first, words spoken by humans cannot be recognized by computers. To be recognizable, the word is processed using a specific method. Linear Predictive Coding Method (LPC) is a method used in this research to extract the characteristics of speech. The result of the LPC method is the LPC coefficient which is the number of LPC orders plus 1. The LPC coefficient is processed using Fast Fourier Transform (FFT) 512 to simplify the process of speech recognition. The results are then trained using Backpropagation Neural Network (BPNN) to recognize the spoken word. Speech recognition on the program is implemented as an animated object motion controller on the computer. The end result of this research is animated objects move in accordance with the spoken word. The optimal BPNN structure in this research is to use traingda training function, number of nodes 3, learning rate 0.05, epoch 1000, performance goal 0,00001. This structure can produce the smallest MSE value that is 0,000009957. So, this structure can recognize new words with 100% accuracy for trained data, 80% for the same respondents with trained data and reach 67.5% for new respondents.

Identification of novel candidate genes for age at first calving in Nellore cows using a SNP chip specifically developed for Bos taurus indicus cattle

The age at first calving has a great economic impact on the beef cattle system and calving at 24 months is an objective of selection for a more efficient herd. However, an age at first calving around 36 months has been observed for Nellore cattle in Brazil. Thus, a genome-wide association study (GWAS) was carried out with 8376 records of age at first calving and 3239 animals genotyped with the GGP-Indicus 35K, which has been developed specifically for Bos taurus indicus. The weighted single-step genomic best linear unbiased prediction method was used, with adjacent SNPs (single nucleotide polymorphisms) in genomic windows of 1.0 Mb. After quality control, 3239 (2161 males and 1078 females) animals genotyped for 30,519 SNPs were used in GWAS analysis. The average and standard deviation of age at first calving were 1041.7 and 140.6 days, respectively. The heritability estimate was 0.10 ± 0.02. The GWAS analysis found seven genomic regions in BTA1, 2, 5, 12, 18, 21, and 24, which explained a total of 11.24% of the additive genetic variance of age at first calving. In these regions were found 62 protein coding genes, and the genes HSD17B2, SERPINA14, SERPINA1, SERPINA5, STAT1, NFATC1, ATP9B, CTDP1, THPO, ECE2, PSMD2, EIF4G1, EIF2B2, DVL3, POLR2H, TMTC2, and GPC6 are possible candidates for age at first birth due their function. Moreover, two molecular functions (“serine-type endopeptidase inhibitor activity” and “negative regulation of endopeptidase activity”) were significant, which depend on several serpin genes. The use of a SNP chip developed especially for Bos taurus indicus allowed to find genomic regions for age at first calving, which are close to QTLs previously reported for other reproduction-related traits. Future studies can reveal the causal variants and their effects on reproductive precocity of Nellore cows.

Genetic evaluation including intermediate omics features.

In animal and plant breeding and genetics, there has been an increasing interest in intermediate omics traits, such as metabolomics and transcriptomics, which mediate the effect of genetics on the phenotype of interest. For inclusion of such intermediate traits into a genetic evaluation system, there is a need for a statistical model that integrates phenotypes, genotypes, pedigree, and omics traits, and a need for associated computational methods that provide estimated breeding values. In this paper, a joint model for phenotypes and omics data is presented, and a formula for the breeding values on individuals is derived. For complete omics data, three equivalent methods for best linear unbiased prediction of breeding values are presented. In all three cases, this requires solving two mixed model equation systems. Estimation of parameters using restricted maximum likelihood is also presented. For incomplete omics data, extensions of two of these methods are presented, where in both cases, the extension consists of extending an omics-related similarity matrix to incorporate individuals without omics data. The methods are illustrated using a simulated data set.

An Improved Sequential Adaptive Method for Linear Prediction of Speech Signals.(Dept.E)

An Improved Sequential Adaptive Method for Linear Prediction of Speech Signals.(Dept.E)

EpitopeVec: linear epitope prediction using deep protein sequence embeddings.

MotivationB-cell epitopes (BCEs) play a pivotal role in the development of peptide vaccines, immuno-diagnostic reagents and antibody production, and thus in infectious disease prevention and diagnostics in general. Experimental methods used to determine BCEs are costly and time-consuming. Therefore, it is essential to develop computational methods for the rapid identification of BCEs. Although several computational methods have been developed for this task, generalizability is still a major concern, where cross-testing of the classifiers trained and tested on different datasets has revealed accuracies of 51–53%.ResultsWe describe a new method called EpitopeVec, which uses a combination of residue properties, modified antigenicity scales, and protein language model-based representations (protein vectors) as features of peptides for linear BCE predictions. Extensive benchmarking of EpitopeVec and other state-of-the-art methods for linear BCE prediction on several large and small datasets, as well as cross-testing, demonstrated an improvement in the performance of EpitopeVec over other methods in terms of accuracy and area under the curve. As the predictive performance depended on the species origin of the respective antigens (viral, bacterial and eukaryotic), we also trained our method on a large viral dataset to create a dedicated linear viral BCE predictor with improved cross-testing performance.Availability and implementationThe software is available at https://github.com/hzi-bifo/epitope-prediction.Supplementary information Supplementary data are available at Bioinformatics online.

Research of Robust Trajectory Tracking Control and Attenuated Chattering: Application on Quadrotor

In this paper, we presented a strategy for accurate trajectory tracking control of a quadrotor with unknown disturbances. To guarantee that the tracking errors of all system state variables converge to zero in finite time and eliminate the chattering phenomenon caused by the switching control action, a control strategy that combines linear prediction model of disturbances and fuzzy sliding mode control (SMC) based on logical framework with side conditions (LFSC) was designed. LFSC was applied for both position and attitude tracking of the quadrotor. Firstly, a linear prediction method was devised to minimize the effects of external disturbances. Secondly, a new fuzzy law was implemented to eliminate the chattering phenomenon. In addition, the stabilities of position and attitude were demonstrated by using Lyapunov theory, respectively. Simulation results and comprehensive comparisons demonstrated the superior performance and robustness of the proposed LFSC scheme in the case of external disturbances.

Modeling and Reproducing Textile Sensor Noise: Implications for Textile-Compatible Signal Processing Algorithms.

Smart textiles provide an opportunity to simultaneously record various electrophysiological signals, e.g., ECG, from the human body in a non-invasive and continuous manner. Accurate processing of ECG signals recorded using textile sensors is challenging due to the very low signal-to-noise ratio (SNR). Signal processing algorithms that can extract ECG signals out of textile-based electrode recordings, despite low SNR are needed. Presently, there are no textile ECG datasets available to develop, test and validate these algorithms. In this paper we attempted to model textile ECG signals by adding the textile sensor noise to open access ECG signals. We employed the linear predictive coding method to model different features of this noise. By approximating the linear predictive coding residual signals using Kernel Density Estimation, an artificial textile ECG noise signal was generated by filtering the residual signal with the linear predictive coding coefficients. The synthetic textile sensor noise was added to the MIT-BIH Arrhythmia Database (MITDB), thus creating Textile-like ECG dataset consisting of 108 trials (30 min each). Furthermore, a Python code for generating textile-like ECG signals with variable SNR was also made available online. Finally, to provide a benchmark for the performance of R-peak detection algorithms on textile ECG, the five common R-peak detection algorithms: Pan & Tompkins, improved Pan & Tompkins (in Biosppy), Hamilton, Engelse, and Khamis, were tested on textile-like MITDB. This work provides an approach to generating noisy textile ECG signals, and facilitating the development, testing, and evaluation of signal processing algorithms for textile ECGs.

Evaluation of Nonparametric SAR Tomography Methods for Urban Building Reconstruction

Recently, the synthetic aperture radar tomography (TomoSAR) technique has attracted significant attention owing to its 3-D reconstruction capability of complex urban environments. The availability of a high number of images is usually a requirement for nonparametric spectral estimation methods. This letter evaluates the potential of four nonparametric spectral estimation algorithms, that is: 1) linear prediction (LP); 2) minimum norm (MN); 3) singular value decomposition (SVD); and 4) Capon for improved tomographic reconstruction of the third dimension of built-up areas with a small number of observations. The performance analysis is carried out for both simulated and real SAR datasets. The returns from the employed techniques indicate the efficient and low-computational estimator of LP by minimizing the average output signal power at the array of antenna elements and make it possible to separate multiple scatters at a distance below the Rayleigh resolution and clean sidelobes’ phenomena in the elevation profiles. The experimental results of a dataset acquired by the TerraSAR-X sensor verify the effectiveness of the LP spectral estimator algorithm in the reconstruction of urban buildings. The estimated height of scatterers with the LP method is considerably similar to the ground-observed data.

Application of Genetic Algorithm-Multiple Linear Regression and Artificial Neural Network Determinations for Prediction of Kovats Retention Index

This study aims to compare linear and nonlinear prediction methods in predicting the Kovats retention index of 126 compounds extracted from the Lippia origanoides plant. The retention index of each compound has been predicted based on its molecular descriptors. There have been 189 molecular descriptors for each compound in this study, and the best descriptors have been selected using the Genetic Algorithm (GA). It has succeeded in selecting the best five descriptors used to build the Multiple Linear Regression (MLR) and the Artificial Neural Network (ANN) model. MLR has obtained R2 of 0.959, 0.946, 0.955, and a Root Mean Square Error (RMSE) of 48.00, 50.84, 47.19 on training, validation, and testing, respectively. Meanwhile, ANN has obtained R2 of 0.963, 0.947, 0.962, and an RMSE of 45.45, 50.59, 43.20, respectively. Compared to MLR, there has been an increase in the ANN model's performance, with an increase in R2 of 0.004, 0.001, and 0.007 and a decrease in RMSE of 2.55, 0.25, and 3.99. Based on the prediction results obtained, it is known that in this case, the ANN method can provide better predictive results than MLR.

A comparison of Laryngeal effect in the dialects of Punjabi language

Human beings have their own speaking style which helped them in depicting their native language. The major reason behind variability in some language is due to varying dialect of the speakers. In the field of Automatic Speech Recognition (ASR), key challenge is to recognize and to generate an acoustic model which represents differences of redundant acoustic features. In this paper, an issue of dialect classification is perform on the basis of tonal aspects of laryngeal phoneme [h]. This is an empirical study of [h] sound words in four major dialects of Indian Punjabi language with two key parameters, namely F0 variation, and acoustic space, which are calculated using two formant frequencies: F1, and F2. The results are based on four different dialects which provide us some interesting hypotheses and are explored with self-created dataset. The speech analysis tool PRAAT features have been extracted and correlations are studied using Statistical Package for the Social Sciences (SPSS). Each variable has been compared with same variable of all other dialects. The results analysis showed that the fundamental frequency of these vowels are influenced distinctly in different dialectal conditions. Apart F1 and F2 have shown a significant correlation with each spoken dialect. Further work is extended through processing of acoustic information at feature level or by comparing the performance analysis using basic or hybrid Linear Predictive Cepstral Coefficients feature extraction methods. The result shows that the hybrid LPCC + F0 system achieved a Relative Improvement (R.I.) of 6.94% on Subspace Gaussian Mixture Model model in comparison to that of basic LPCC approach respectively.

Genotype by environment interaction analysis of grain yield and yield components in provitamin A maize

ABSTRACT Selecting superior genotypes for varietal release and commercial use is a key breeding objective. The use of appropriate statistical methods to analyze the complex genotype by environment interaction (GEI) phenomena may increase the efficiency in selecting superior genotypes. The objectives of this study were to evaluate the performance of maize (Zea mays L.) genotypes in diverse environments and identify and recommend high-yielding and stable genotypes for farmer adoption. Seven provitamin A maize varieties, including checks, were evaluated in 11 environments from 2016 to 2018. A linear mixed model analysis was performed using restricted maximum likelihood (REML) and the best linear unbiased prediction (BLUP) methods to estimate genotype, environment and genotype by environment interaction (GEI) variance components; and predict genetic values. Genetic correlations were also calculated to describe relationships across multiple environments. Genotype main effect plus genotype by environment interaction (GGE) biplot analysis was performed using BLUP estimates. The effects of genotype, and environment and GEI were significant (P< 0.05) for grain yield. Both the mixed model and the GGE biplot identified PVA SYN 21 (G2) as a superior genotype on the basis of its mean performance. The GGE biplot analysis revealed that this cultivar was also the most stable genotype across the 11 environments. The mixed model analysis allowed for an efficient selection of superior provitamin A maize genotypes.

Matrix product state recursion methods for computing spectral functions of strongly correlated quantum systems

We present a method for extrapolation of real-time dynamical correlation functions which can improve the capability of matrix product state methods to compute spectral functions. Unlike the widely used linear prediction method, which ignores the origin of the data being extrapolated, our recursion methods utilize a representation of the wavefunction in terms of an expansion of the same wavefunction and its translations at earlier times. This recursion method is exact for a noninteracting Fermi system. Surprisingly, the recursion method is also more robust than linear prediction at large interaction strength. We test this method on the Hubbard two-leg ladder and present more accurate results for the spectral function than previous studies.

An Intelligent Passenger Flow Prediction Method for Pricing Strategy and Hotel Operations

Hospitality industry plays a crucial role in the development of tourism. Predicting the future demand of a hotel is a key step in the process of hotel revenue management. Hotel passenger flow prediction plays an important role in guiding the formulation of hotel pricing and operating strategies. On the one hand, hotel passenger flow prediction can provide decision support for hotel managers and effectively avoid the waste of hotel resources and loss of revenue caused by the loss of customers. On the other hand, it is the guarantee of the priority occupation of business opportunities by hotel enterprises, which can help hotel enterprises adjust their operation strategies reasonably to better adapt to the market situation. In addition, hotel passenger flow prediction is helpful to judge the overall operating condition of the hotel industry and assess the risk level of the hotel project to be built. Hotel passenger flow is affected by many factors, such as weather, environment, season, holidays, economy, and emergencies, and has the characteristics of complex nonlinear fluctuation. The existing demand predicting methods include linear methods and nonlinear methods. The linear prediction methods rely on the stability of environment and time series, so they cannot completely simulate the complex nonlinear fluctuations characteristics of hotel passenger flow. Traditional nonlinear prediction methods need to improve the prediction accuracy, and they are difficult to deal with the increasing data of hotel passenger flow. Based on the above analysis, this paper constructs a deep learning prediction model based on Long Short-Term Memory (LSTM) to predict the number of actual monthly arrival bookings. The number of actual monthly arrival bookings can reflect the actual monthly passenger flow of a hotel. The prediction model can effectively reduce the loss caused by cancellation or nonarrival of bookings due to various reasons and improve the hotel revenue. The experimental part of this paper is based on the booking demand dataset of a resort hotel in Portugal from July 1, 2015, to August 31, 2017. Artificial neural network (ANN) and support vector regression (SVR) are built as benchmark models to predict the number of actual monthly arrival bookings of this hotel. The experimental results show that, compared with the benchmark models, the LSTM model can effectively improve the prediction ability and provide necessary reference for the hotel's future pricing decision and operation mode arrangement.

Labyrinth weir outlet ramps: managing flow instability and discharge efficiency

The installation of a labyrinth weir as the crest of a stepped chute significantly influences the downstream chute inflow conditions relative to published design standards for more traditional crest shapes. A current study at the Utah Water Research Laboratory (Utah State University) evaluated a 10.67° trapezoidal labyrinth weir crest discharging into a 0.8H:1.0V stepped chute. To better direct flows into the chute and mitigate flow instabilities (i.e. flow surging), sloped ramps were placed in the labyrinth weir outlet cycles. The influence of six different ramp geometries are reported here relative to the weir discharge efficiency, flow surging and chute wall height requirements based on splash and spray depths. The labyrinth weir increased the spillway wall height required for flow containment by 200–300% relative to linear weir wall height predictive methods. The addition of ramps provided better flow transition into the stepped chute and reduced the required chute wall heights by up to 15%. Furthermore, ramp heights taller than half the weir wall height effectively reduced flow surging but increased local submergence, which decreased the discharge efficiency by up to 9%. Thus, an outlet cycle ramp geometry selection should be optimised by discharge efficiency, flow surging and chute wall height requirements.

Genomic evaluation of Brown Swiss dairy cattle with limited national genotype data and integrated external information

This study demonstrated the feasibility of a genomic evaluation for the dairy cattle population for which the small national training population can be complemented with foreign information from international evaluations. National test-day milk yield data records for the Slovenian Brown Swiss cattle population were analyzed. Genomic evaluation was carried out using the single-step genomic best linear unbiased prediction method (ssGBLUP), resulting in genomic estimated breeding values (GEBV). The predominantly female group of genotyped animals, representing the national training population in the single-step genomic evaluation, was further augmented with 7,024 genotypes of foreign progeny-tested sires from an international Brown Swiss InterGenomics genomic evaluation (https://interbull.org/ib/whole_cop). Additionally, the estimated breeding values for the altogether 7,246 genotyped domestic and foreign sires from the 2019 sire multiple across-country evaluation(MACE), were added to the ssGBLUP as external pseudophenotypic information. The ssGBLUP method, with integration of MACE information by avoiding double counting, was then performed, resulting in MACE-enhanced GEBV (GEBVM). The methods were empirically validated with forward prediction. The validation group consisted of 315 domestic males and 1,041 domestic females born after 2012. Increase, inflation, and bias of the GEBV(M) reliability (REL) were assessed for the validation group with a focus on females. All individuals in the validation benefited from genomic evaluations using both methods, but the GEBV(M) REL increased most for the youngest selection candidates. Up to 35 points of GEBV REL could be assigned to national genomic information, and up to 17 points of GEBVM REL could additionally be attributed to the integration of foreign sire genomic and MACE information. Results indicated that the combined foreign progeny-tested sire genomic and external MACE information can be used in the single-step genomic evaluation as an equivalent replacement for domestic phenotypic information. Thus, an equal or slightly higher genomic breeding value REL was obtained sooner than the pedigree-based breeding value REL for the female selection candidates. When the abundant foreign progeny-tested sire genomic and MACE information was used to complement available national genomic and phenotypic information in single-step genomic evaluation, the genomic breeding value REL for young-female selection candidates increased approximately 10 points. Use of international information provides the possibility to upgrade small national training populations and obtain satisfying reliability of genomic breeding values even for the youngest female selection candidates, which will help to increase selection efficiency in the future.