Lignicolous Freshwater Fungi Research Articles

Redefining phylogenetic placements of Hyphodiscosia: integrative taxonomic insights based on morphological and phylogenetic analyses

In conducting a survey on the diversity of lignicolous freshwater fungi across a north-south latitudinal gradient in the Asian region, two strains were collected from freshwater habitats. This species is characterized by forming pinkish sporulating colonies both on wood and in culture, presenting macronematous conidiophores that swollen at the apex, producing cylindrical, pink in mass, 1-septate conidia, each with two flexuous, filamentous appendages arising from the middle of the cells. These characteristics closely match the definition of Hyphodiscosia. Through multigene phylogenetic analysis, this study for the first time determines the phylogenetic position of Hyphodiscosia within Muyocopronaceae (Muyocopronales). This study provides detailed illustrations, updates on molecular data, and a morphological comparison with related genera within Muyocopronaceae, as well as discusses the validity of the currently accepted four species within Hyphodiscosia.

Brachysporium sinense, a new species from a plateau lake in Yunnan Province, China

Yunnan is one of the fungal diversity hotspots and many studies of lignicolous freshwater fungal research have been done in this Province. Presently, research on lignicolous freshwater fungi in the plateau lakes of this region is being systematically conducted. During our investigation of the species diversity of lignicolous freshwater fungi in Dujuanhu Lake, we found a distinctive species, Brachysporium sinense, based on morphological characteristics and phylogenetic analysis. Brachysporium sinense is distinguished from other Brachysporium species by monoblastic, integrated, terminal conidiogenous cells and fusoid to limoniform, verrucose, septate, brown to dark brown conidia with subhyaline ends, which are connected to the conidiogenous cells by a single denticle. Detailed descriptions and illustrations and relatively comprehensive sequence data are provided.

New Species and Records of Pleurotheciaceae from Karst Landscapes in Yunnan Province, China.

Pleurotheciaceae is a genera-rich and highly diverse family of fungi with a worldwide distribution in aquatic and terrestrial habitats. During the investigation of lignicolous freshwater fungi from karst landscapes in Yunnan Province, China, 15 fresh strains were obtained from submerged decaying wood. Based on the morphology and phylogenetic analysis of a combined LSU, ITS, SSU, and rpb2 sequence dataset, Obliquifusoideum triseptatum, Phaeoisaria obovata, Pleurotheciella brachyspora, Pl. longidenticulata, and Pl. obliqua were introduced as new species, P. synnematica and Rhexoacrodictys melanospora were reported as new habitat records, and P. sedimenticola and Pl. hyalospora were reported as new collections. In addition, based on morphological comparisons and phylogenetic analysis, we accepted Obliquifusoideum into in the family Pleurotheciaceae (Pleurotheciales, Savoryellomycetidae). Freshwater habitats are the primary habitats of Pleurotheciaceae species, and Yunnan Province has the highest concentration and species diversity of Pleurotheciaceae in China.

Appendopyricularia guttulata sp. nov., a lignicolous freshwater fungus from Dianchi Lake in Yunnan, China

During an investigation into species diversity of lignicolous freshwater fungi from the plateau lakes in Yunnan Province, China, a hyphomycetous fungus was collected from Dianchi Lake. The new isolate was placed in Appendopyricularia as a sister taxon of Appendopyricularia juncicola within Barbatosphaeriaceae based on the phylogenetic analysis of combined ITS and LSU sequence data. The fungus is characterized by acrogenous, fusoid, guttulate conidia that are 3–4 septate and have a flexuous central apical appendage. It exhibits more pronounced guttulate appendages and more prominent denticle sporulation structure. Therefore, Appendopyricularia guttulata is introduced as a new species based on morphological characteristics and phylogenetic evidence. The detailed description and illustrations of the new species are provided, as well as the morphological comparison with similar taxa.

Two novel lignicolous freshwater fungi, Conioscypha xizangensis and Cordana linzhiensis, from the Tibetan Plateau, China

ABSTRACT Lignicolous freshwater fungi form a highly diverse group and are primarily distributed in the classes Dothideomycetes and Sordariomycetes. During an investigation of lignicolous freshwater fungi on the Tibetan Plateau, China, four collections were obtained from submerged wood in freshwater habitats. Morphological studies combined with multi-gene phylogenetic analysis based on ITS, LSU, SSU, and RPB2 indicated that the collected taxa belonged in the orders Conioscyphales and Cordanales in Sordariomycetes. Based on evidence from morpho-molecular analyses, two new species, Conioscypha xizangensis and Cordana linzhiensis, are introduced with descriptions of their hyphomycetous asexual states. Conioscypha xizangensis shows a close phylogenetic relationship with Conioscypha tenebrosa but, unlike that species, has phialidic and integrated conidiogenous cells. Cordana linzhiensis forms a distinct clade within the genus and possesses unique characteristics compared with existing species in having swollen conidiophores, polyblastic, clavate, or cylindrical conidiogenous cells, and solitary or acropleurogenous conidia with a hyaline mucoid sheath. These new discoveries further add to the diversity of freshwater fungi on the Tibetan Plateau.

Three novel species of Aquapteridospora (Distoseptisporales, Aquapteridosporaceae) from freshwater habitats in Tibetan Plateau, China.

During an investigation of lignicolous freshwater fungi in the Tibetan Plateau, three Aquapteridospora taxa were collected from freshwater habitats in Xizang, China. The new species possess polyblastic, sympodial, denticles conidiogenous cells and fusiform, septate, with or without sheath conidial, that fit within the generic concept of Aquapteridospora, and multi-gene phylogeny placed these species within Aquapteridospora. Detailed morphological observations clearly demarcate three of these from extant species and are hence described as new taxa. The multi-gene phylogeny of the combined LSU, TEF1-α, and ITS sequence data to infer phylogenetic relationships and discuss phylogenetic affinities with morphologically similar species. Based on morphological characteristics and phylogenetic analyses, three new species viz. A.linzhiensis, A.yadongensis, and A.submersa are introduced. Details of asexual morphs are described, and justifications for establishing these new species are also provided in this study.

Diversity of Distoseptispora (Distoseptisporaceae) taxa on submerged decaying wood from the Red River in Yunnan, China.

The Red River Basin is located in the Indo-Burma biodiversity hotspot and is rich in lignicolous freshwater fungi, but no systematic research has been conducted. A systematic study on the species diversity of lignicolous freshwater fungi in the basin is ongoing. Seven distoseptispora-like specimens were collected from the Red River Basin in Yunnan. Phylogenetic analysis of ITS, LSU, tef1-α, and rpb2 genes and combined morphological data indicate that there are six distinct species of Distoseptispora, including two new species and four known species. Two new species were named D.suae and D.xinpingensis, and the four known species were D.bambusae, D.euseptata, D.obpyriformis and D.pachyconidia. This study provides detailed descriptions and illustrations of these six species and an updated phylogenetic backbone tree of Distoseptispora.

Wongia suae sp. nov., a lignicolous freshwater fungus from Yuanjiang (Red River) Basin, China

Diversity of lignicolous freshwater fungi in Yuanjiang (Red River) basin, Yunnan, China is currently being studied. Three fresh collections of Papulosaceae were collected. Wongia suae sp. nov. and W. fusiformis were identified based on morphology and phylogenetic analysis of combined ITS, LSU, rpb2, SSU and tef1-α sequence data. The detailed descriptions and illustrations of these two species are provided, as well as the morphological comparison with similar taxa.

Lignicolous Freshwater Fungi from Plateau Lakes in China (I): Morphological and Phylogenetic Analyses Reveal Eight Species of Lentitheciaceae, Including New Genus, New Species and New Records.

During the investigation of lignicolous freshwater fungi in plateau lakes in Yunnan Province, China, eight Lentitheciaceae species were collected from five lakes viz. Luguhu, Qiluhu, Xingyunhu, Cibihu, and Xihu lake. Based on morphological characters and phylogenetic analysis of combined ITS, LSU, SSU, and tef 1-α sequence data, a new genus Paralentithecium, two new species (Paralentithecium suae, and Setoseptoria suae), three new records (Halobyssothecium phragmitis, H. unicellulare, and Lentithecium yunnanensis) and three known species viz. Halobyssothecium aquifusiforme, Lentithecium pseudoclioninum, and Setoseptoria bambusae are reported.

Morphology and multi-gene phylogeny reveal a novel Torula (Pleosporales, Torulaceae) species from the plateau lakes in Yunnan, China.

During an investigation into lignicolous freshwater fungi from the plateau lakes in Yunnan Province, China, two fresh collections of Torula taxa were collected and examined morpholgically. Torulaluguhuensis is characterised by: conidiophores which are semi-macronematous mononematous, erect, septate, smooth, slightly flexuous and pale brown; conidiogenous cells which are holoblastic, mono- to polyblastic, integrated, terminal, terminal or intercalary in conidial chains, doliiform and pale brown; conidia which are branched chains, acrogenous, straight or slightly curved, dark brown to blackish, pale brown or subhyaline at apex, 1-3 septate, strongly constricted at the septa, verruculose or finely echinulate and rounded at both ends. A new species was introduced, based on morphological and phylogenetic analysis of combined ITS, LSU, RPB2 and TEF sequence data. Detailed descriptions and illustrations are provided, with an updated phylogenetic tree depicting intergeneric relationships within the Torulaceae.

Taxonomy and Phylogeny of Hyphomycetous Muriform Conidial Taxa from the Tibetan Plateau, China

During the investigation of lignicolous freshwater fungi in the Tibetan Plateau habitat, fifteen collections were isolated from submerged decaying wood. Fungal characteristics are commonly found as punctiform or powdery colonies with dark pigmented and muriform conidia. Multigene phylogenetic analyses of combined ITS, LSU, SSU and TEF DNA sequences showed that they belong to three families in Pleosporales. Among them, Paramonodictys dispersa, Pleopunctum megalosporum, Pl. multicellularum and Pl. rotundatum are established as new species. Paradictyoarthrinium hydei, Pleopunctum ellipsoideum and Pl. pseudoellipsoideum are reported as new records on the freshwater habitats in Tibetan Plateau, China. The morphological descriptions and illustrations of the new collections are provided.

Phaeoisaria ellipsoidea (Pleurotheciaceae, Pleurotheciales, Sordariomycetes), a new lignicolous freshwater fungus from Xishuangbanna, Yunnan Province, China

In this study, two lignicolous freshwater fungi were collected and isolated from submerged decaying wood in Manfeilong reservoir in Xishuangbanna, Yunnan Province, China. Based on the morphological characters and phylogenetic analyses of combined LSU, SSU, ITS and rpb2 sequence dataset, one is identified as a new species in Phaeoisaria, namely P. ellipsoidea, and the other is identified as Sterigmatobotrys rudis. Descriptions and illustrations of the two species are provided.

The plethora of Tubeufiaceae in lakes of the northwestern Yunnan plateau, China.

The diversity of lignicolous freshwater fungi in northwestern Yunnan, China, has been studied for several years in the College of Agriculture and Biological Science, at Dali University. Over the last 5 years, we published two new genera and nine new species of Tubeufiaceae from northwestern Yunnan. This study focused on introducing tubeufia-like hyphomycetous fungi found in freshwater lakes in the northwestern Yunnan plateau. Eleven fresh collections of tubeufiaceous taxa were gathered and identified. Among them, a new genus, Neomanoharachariella, is introduced to accommodate Neomanoharachariella aquatica, which is characterized by a light brown to dark brown color, dictyoseptate, and broadly oval to ellipsoid and well-developed conidiophores. Two new species, viz., Neohelicosporium suae and Parahelicomyces suae, one new record, Helicoma rufum, and three new collections, namely, H. rugosum, P. hyalosporus, and Tubeufia cylindrothecia are introduced based on morphological evidence and molecular phylogenetic analysis of combined ITS, LSU, tef 1-α, and RPB2 sequence data. Detailed descriptions and illustrations of these species are provided, and a morphological comparison with similar taxa is discussed.

Novel Species and Records of Dictyosporiaceae from Freshwater Habitats in China and Thailand.

China and Thailand are rich in fungal diversity with abundant freshwater resources that are favorable for numerous fungal encounters. Resulting from this, the majority of the Dictyosporiaceae species reported were from these two countries. During the investigation on the diversity of lignicolous freshwater fungi in the Greater Mekong Subregion, eleven collections of cheirosporous species on submerged wood were collected from lentic and lotic habitats in China and Thailand. Phylogenetic analysis that combined nuclear small-subunit ribosomal RNA (SSU), internal transcribed spacer region (ITS), nuclear large subunit ribosomal RNA (LSU) and translation elongation factor 1α (tef 1-α) loci revealed six new species: Dictyocheirospora chiangmaiensis, D. multiappendiculata, D. suae, Digitodesmium aquaticum, Vikalpa grandispora and V. sphaerica. In addition, four known species were also identified and reported based on morphological and phylogenetic evidence. The detailed descriptions and illustrations of these taxa are provided with an updated phylogenetic tree of Dictyosporiaceae.

Lignicolous freshwater ascomycetes from Thailand: Introducing Dematipyriformamuriformis sp. nov., one new combination and two new records in Pleurotheciaceae.

During the study of lignicolous freshwater fungi from Thailand, three pleurotheciaceous species were collected from freshwater habitats in Thailand. Two were identified as Pleurotheciumaquaticum and Rhexoacrodictysfimicola, and the third is a new species Dematipyriformamuriformis sp. nov.. Rhexoacrodictys is accepted in Pleurotheciaceae based on phylogenetic analysis. Rhexoacrodictysnigrospora is transferred to Dematipyriforma based on phylogenetic analysis and morphological characters. Pleurotheciumaquaticum and Rhexoacrodictysfimicola are reported from Thailand for the first time.

Xenoastrosphaeriella aquatica sp. nov. from freshwater habitat in Yunnan Province, China

Xenoastrosphaeriella aquatica sp. nov. was discovered during an investigation of lignicolous freshwater fungi in northwestern Yunnan Province, China. Evidence of morphological characters and sequence data indicated that the new collection has affiliation to Xenoastrosphaeriella. Phylogenetic analysis of combined LSU, SSU and tef1-α sequence data was carried out to determine the phylogenetic placement of this species, which showed that X. aquatica clustered with X. tornata and X. trochus, but these three species are phylogenetically distinct. Xenoastrosphaeriella aquatica differs from other species in having dark olive to brown and larger ascospores. A detailed description and illustration of the new species are provided, as well as the comparisons with similar taxa.

Lignicolous freshwater fungi in Yunnan Province, China: an overview

ABSTRACT Yunnan Province is one of the rich biodiversity hotspots with abundant resources of lignicolous freshwater fungi. A total of 281 species of lignicolous freshwater fungi from 1986 to the present in Yunnan Province. They are mostly distributed in the classes Dothideomycetes and Sordariomycetes, a few species in the Eurotiomycetes and Leotiomycetes, and rarely reported in Orbiliomycetes and Pezizomycetes. Lignicolous freshwater fungi can decompose lignocellulose substrates and release energy and nutrients, and thus playing an important role in freshwater environment. This study briefly reviewed the biodiversity and taxonomic status of lignicolous freshwater fungi in Yunnan, the ecological functions of lignicolous freshwater fungi, factors affecting community distribution, application status, and research difficulties.

New species, Parahelicomyces yunnanensis sp. nov. and Tubeufia nigroseptum sp. nov. from freshwater habitats in Yunnan, China

Diversity of lignicolous freshwater fungi in northwestern Yunnan, China is currently being studied. Four fresh collections of tubeufiaceous taxa were collected and identified. Among of them, Parahelicomyces yunnanensis sp. nov and Tubeufia nigroseptum sp. nov. are introduced as new species based on morphology and molecular phylogenetic analysis of combined ITS, SSU, TEF1-α and RPB2 sequence data. The detailed descriptions and illustrations of the new species are provided, as well as the morphological comparison with similar taxa are discussed. Two strains of Neohelicomyces aquaticus and Tubeufia cylindrothecia are provided.

Freshwater hyphomycetes in Sordariomycetes: two new species of Tainosphaeria (Chaetosphaeriaceae, Chaetosphaeriales) from Thailand

Ongoing investigation of diversity and taxonomy of lignicolous freshwater fungi in Thailand have revealed plenty of new hyphomycetous species. In this study, Tainosphaeria aquatica sp. nov. and T. thailandense sp. nov., occurred on submerged wood in Thailand, are described and illustrated based on the evidences of morphological characters and phylogenetic analysis of combined LSU, ITS and TEF1-α dataset. Tainosphaeria aquatica is characterized by hyaline, 0–3-septate, cylindrical to long fusiform conidia with hair-like, hyaline appendages at both ends. Tainosphaeria thailandense is distinct in having laurel-green, 0–1-septate, reniform to ellipsoidal conidia with polar appendages. A synopsis of morphological characteristics of Tainosphaeria species is provided.

Acrogenospora (Acrogenosporaceae, Minutisphaerales) Appears to Be a Very Diverse Genus.

During a study of diversity and taxonomy of lignicolous freshwater fungi in China, nine species of Acrogenospora were collected. Seven of these were new species and they are described and illustrated. With morphology, additional evidence to support establishment of new species is provided by phylogeny derived from DNA sequence analyses of a combined LSU, SSU, TEF1α, and RPB2 sequence dataset. Acrogenospora subprolata and A. verrucispora were re-collected and sequenced for the first time. The genus Acrogenospora is far more species rich than originally thought, with nine species found in a small area of Yunnan Province, China.