Developing lightweight, highly absorption and broadband microwave absorbents to combat severe electromagnetic radiation pollution poses a significant challenge. In this study, we designed a novel chain-like CNFs-CoNi/C nanocomposite by in-situ growth of bimetallic MOFs on the CNFs followed by calcination. The resulting CoNi/C composite with hollow structure was uniformly distributed along the 1D CNFs. The unique porous structure and heterogeneous interface derived from MOFs facilitated efficient scattering and multiple reflections of microwaves. By harnessing interfacial polarization loss, dipole polarization loss, and conduction loss mechanisms synergistically, the chain-shaped porous multi-stage CNFs-CoNi/C composite exhibited exceptional microwave absorption performance at a filling ratio of 10 %. It achieves a maximum reflection loss of −70 dB and an absorption bandwidth (EAB) for RL ≤ -10 exceeding 4.82 GHz with a corresponding thickness as low as 1.25 mm. This study introduced a lightweight and highly absorptive material that offers valuable insights into developing high-performance electromagnetic wave absorbing materials through organic composite comprising MOF and carbon materials.