We present a detailed low-temperature investigation of the statics and dynamics of the anions and methyl groups in the organic conductors (TMTSF)${}_{2}$PF${}_{6}$ and (TMTSF)${}_{2}$AsF${}_{6}$ (TMTSF: tetramethyl-tetraselenafulvalene). The 4 K neutron-scattering structure refinement of the fully deuterated (TMTSF)${}_{2}$PF${}_{6}$-D12 salt allows locating precisely the methyl groups at 4 K. This structure is compared to the one of the fully hydrogenated (TMTSF)${}_{2}$PF${}_{6}$-H12 salt previously determined at the same temperature. Surprisingly, it is found that deuteration corresponds to the application of a negative pressure of $5\ifmmode\times\else\texttimes\fi{}{10}^{2}$ MPa to the H12 salt. Accurate measurements of the Bragg intensity show anomalous thermal variations at low temperature both in the deuterated PF${}_{6}$ and AsF${}_{6}$ salts. Two different thermal behaviors have been distinguished. Small Bragg-angle measurements reflect the presence of low-frequency modes at characteristic energies ${\ensuremath{\theta}}_{E}$ $=$ 8.3 K and ${\ensuremath{\theta}}_{E}$ $=$ 6.7 K for the PF${}_{6}$-D12 and AsF${}_{6}$-D12 salts, respectively. These modes correspond to the low-temperature methyl group motion. Large Bragg-angle measurements evidence an unexpected structural change around 55 K, which probably corresponds to the linkage of the anions to the methyl groups via the formation of F\dots{}D-CD${}_{2}$ bonds observed in the 4 K structural refinement. Finally we show that the thermal expansion coefficient of (TMTSF)${}_{2}$PF${}_{6}$ is dominated by the librational motion of the PF${}_{6}$ units. We quantitatively analyze the low-temperature variation of the lattice expansion via the contribution of Einstein oscillators, which allows us to determine for the first time the characteristic frequency of the PF${}_{6}$ librations: ${\ensuremath{\theta}}_{E}$ \ensuremath{\approx} 50 K and ${\ensuremath{\theta}}_{E}$ $=$ 76 K for the PF${}_{6}$-D12 and PF${}_{6}$-H12 salts, respectively.