Field-measured Leaf Area Index Research Articles

Improving coniferous forests leaf area index estimation by filling the occluded point cloud from airborne laser scanning

Accurate estimation of Leaf Area Index (LAI) is pivotal for understanding vegetation dynamics and ecosystem productivity. Light Detection and Ranging (LiDAR), with its capability to directly capture the three-dimensional (3D) structure of vegetation, offers a promising method for LAI estimation. However, dense leaves, especially coniferous forest, can significantly occlude the penetration of laser beams during Airborne Laser Scanning (ALS) as they traverse the canopy from above. This occlusion results in incomplete point cloud, leading to underestimation of LAI due to the omission of some leaves. Considering the characteristic of leaf clumping growth in coniferous vegetation, a method based on voxelizing point cloud and modeling correlations among neighborhood voxels was developed in this study to fill the occluded point cloud at plot level. The proposed method was validated by applying it to Loblolly pine (Pinus taeda L.) plots. Validation against field-measured LAI demonstrates that the method proposed for filling the occluded point cloud markedly enhances LAI retrieval accuracy, achieving an R2 of 0.7069 and an RMSE of 0.4760. In contrast, LAI retrieval using the original canopy point cloud yielded an R2 of 0.2835 and an RMSE of 1.5883. This advancement highlights a shift from focusing on enhancing retrieval algorithms to addressing data completeness and reliability, offering new perspectives for LAI retrieval research.

Insights into Canopy Escape Ratio from Canopy Structures: Correlations Uncovered through Sentinel-2 and Field Observation

This study explores the quantitative relationship between canopy structure and the canopy escape ratio (fesc), measured as the ratio of near-infrared reflectance of vegetation (NIRv) to the fraction of absorbed photosynthetically active radiation (fAPAR). We analyzed the correlation between fesc and key indicators of canopy structure—specifically, leaf area index (LAI) and clumping index (CI)—utilizing both Sentinel-2 satellite data and in situ observations. Our analysis revealed a moderate correlation between fesc and LAI, evidenced by an R2 value of 0.37 for satellite-derived LAI, which contrasts with the lower correlation (R2 of 0.15) observed with field-measured LAI. Conversely, the relationship between fesc and CI proved to be significantly weaker (R2 < 0.1), indicating minimal interaction between foliage distribution and light escape at the canopy level. This disparity in correlation strength was further evidenced in time series analysis, which showed little phenological variation in fesc compared to LAI. Our findings elucidate the complexities of estimating fesc based on the NIRv to fAPAR ratio and underscore the need for advanced methodologies in future research to enhance the accuracy of canopy escape models.

Multi-Sensor Remote Sensing to Estimate Biophysical Variables of Green-Onion Crop (Allium cepa L.) under Different Sources of Magnesium in Ismailia, Egypt

Foliar feeding has been confirmed to be the fastest way of dealing with nutrient deficiencies and increasing the yield and quality of crop products. The synthesis of chlorophyll and photosynthesis are directly related to magnesium (Mg), which operates in the improvement of plant tissues and enhances the appearance of plants. This study aimed to analyze the correlation between two biophysical variables, including the leaf area index (LAI), the fraction of absorbed photosynthetically active radiation (FAPAR), and seven spectral vegetation indices. The spectral indices under investigation were Atmospherically Resistant Vegetation Index (ARVI), Normalized Difference Vegetation Index (NDVI), Soil Adjusted Vegetation Index (SAVI), Disease–Water Stress Index (DSWI), Modified Chlorophyll Absorption Ratio Index (MCARI), the Red-Edge Inflection Point Index (REIP), and Pigment-Specific Simple Ratio (PSSRa). These indices were derived from Sentinel-2 data to investigate the impact of applying foliar applications of Mg from various sources in the production of green-onion crops. The biophysical variables were derived using field measurements and Sentinel-2 data under the effects of different sources of Mg foliar sprays. The correlation coefficient between field-measured LAI and remotely sensed, calculated LAI was 0.72 in two seasons. Concerning FAPAR, it was found that the correlation between remotely sensed calculated FAPAR and field-measured FAPAR was 0.66 in the first season and 0.89 in the second season. The magnesium oxide nanoparticle (nMgO) treatments resulted in significantly higher yields than the different treatments of foliar applications. The LAI and FAPAR variables showed a positive correlation with yield in the first season (October) and in the second season (March). Yield in treatment by nMgO varied significantly from that in the other treatments, ranging from 69-ton ha−1 in the first season to 74.9-ton ha−1 in the second season. Linear regression between LAI and PSSRa showed the highest correlation coefficient (0.90) compared with other vegetation indices in the first season. In the same season, the highest correlation coefficient (0.94) was found between FAPAR and PSSRa. In the second season, the highest accuracy to the estimate LAI was found in the correlation between MCARI and PSSRa, with correlation coefficients of 0.9 and 0.91, respectively. In the second season, the highest accuracy to the estimate FAPAR was found with the correlation between PSSRa, ARVI, and NDVI, with correlation coefficients 0.97 and 0.96, respectively. The highest correlation coefficients between vegetation indices and yield were found with ARVI and NDVI in the first season, and only with NDVI in the second season.

A deep transfer learning framework for mapping high spatiotemporal resolution LAI

Leaf area index (LAI) is an important variable for characterizing vegetation structure. Contemporary satellite-based LAI products with moderate spatial resolution, such as those derived from the MODIS observations, offer unique opportunities for large-scale monitoring but are insufficient for resolving heterogeneous landscapes. Although high-resolution satellite observations can derive detailed LAI maps, the low revisit frequency and the presence of cloud cover disrupt the temporal continuity of these high-resolution data, thereby leading to the fact that most current LAI inversion models for high spatial resolution data are based on single pixel and date without fully utilizing temporal information. Moreover, LAI estimation models trained solely using satellite products or simulations are also impeded by the inconsistencies between field and satellite LAI exist owing to local atmospheric, soil, and canopy conditions, while in-situ LAI measurements are sparse and insufficient for large-scale missions. To address these challenges, this study proposed a new framework based on deep transfer learning, which includes three key features that contribute to its high performance. Firstly, a Bi-directional Long Short-Term Memory (Bi-LSTM) model is pre-trained using MODIS reflectance and MODIS LAI products to capture the general non-linear relationship between reflectance and LAI and incorporate temporal dependencies as prior information to reduce uncertainties associated with ill-posed inversion problems and noises. Secondly, this pre-trained Bi-LSTM is transferred from satellite to field by fine-tuning with sparse in-situ LAI measurements to overcome issues arising from local inconsistencies. Thirdly, reconstructed Landsat time-series images via fusing MODIS and Landsat reflectance images are used as inputs of the Bi-LSTM to generate high-quality Landsat LAI products at both high spatial and temporal resolutions. To validate the proposed approach, field LAI measurements were collected at nine locations across the contiguous U.S. from 2000 to 2018, including three land cover types: croplands, grasslands, and forest. Quantitative assessments demonstrate that the Bi-LSTM outperforms three benchmarks, including a PROSAIL-based Look-Up Table (LUT) method, a random forest-based LAI retrieval and MODIS LAI (MCD15A3H), exhibiting lower RMSE and higher R2 in most cases. Additionally, the Bi-LSTM predictions yield lower random fluctuations than estimations from the LUT·, random forest and MODIS LAI, indicating the higher robustness of the proposed framework. The findings of this study highlight the value of transfer learning in estimation of vegetation biophysical parameters, which involves pre-training using sufficient existing satellite products to produce a generalized model and transferring knowledge from in-situ measurements to bridge gaps between satellite and field. By leveraging advanced transfer learning techniques and multi-source and multi-scale data, the proposed framework enables the production of long-term LAI maps at fine resolutions, facilitating downstream applications in regions characterized by high spatial heterogeneity.

Spatiotemporally consistent global dataset of the GIMMS leaf area index (GIMMS LAI4g) from 1982 to 2020

Abstract. Leaf area index (LAI) with an explicit biophysical meaning is a critical variable to characterize terrestrial ecosystems. Long-term global datasets of LAI have served as fundamental data support for monitoring vegetation dynamics and exploring its interactions with other Earth components. However, current LAI products face several limitations associated with spatiotemporal consistency. In this study, we employed the back propagation neural network (BPNN) and a data consolidation method to generate a new version of the half-month 1/12∘ Global Inventory Modeling and Mapping Studies (GIMMS) LAI product, i.e., GIMMS LAI4g, for the period 1982–2020. The significance of the GIMMS LAI4g was the use of the latest PKU GIMMS normalized difference vegetation index (NDVI) product and 3.6 million high-quality global Landsat LAI samples to remove the effects of satellite orbital drift and sensor degradation and to develop spatiotemporally consistent BPNN models. The results showed that the GIMMS LAI4g exhibited overall higher accuracy and lower underestimation than its predecessor (GIMMS LAI3g) and two mainstream LAI products (Global LAnd Surface Satellite (GLASS) LAI and Long-term Global Mapping (GLOBMAP) LAI) using field LAI measurements and Landsat LAI samples. Its validation against Landsat LAI samples revealed an R2 of 0.96, root mean square error of 0.32 m2 m−2, mean absolute error of 0.16 m2 m−2, and mean absolute percentage error of 13.6 % which meets the accuracy target proposed by the Global Climate Observation System. It outperformed other LAI products for most vegetation biomes in a majority area of the land. It efficiently eliminated the effects of satellite orbital drift and sensor degradation and presented a better temporal consistency before and after the year 2000. The consolidation with the reprocessed MODIS LAI allows the GIMMS LAI4g to extend the temporal coverage from 2015 to a recent period (2020), producing the LAI trend that maintains high consistency before and after 2000 and aligns with the reprocessed MODIS LAI trend during the MODIS era. The GIMMS LAI4g product could potentially facilitate mitigating the disagreements between studies of the long-term global vegetation changes and could also benefit the model development in earth and environmental sciences. The GIMMS LAI4g product is open access and available under Attribution 4.0 International at https://doi.org/10.5281/zenodo.7649107 (Cao et al., 2023).

Upscaling field-measured seasonal ground vegetation patterns with Sentinel-2 images in boreal ecosystems

ABSTRACT Aboveground biomass (AGB) and leaf area index (LAI) are key variables of ecosystem processes and functioning. Knowledge is lacking on how well the seasonal patterns of ground vegetation AGB and LAI can be detected by satellite images in boreal ecosystems. We conducted field measurements between May and September during one growing season to investigate the seasonal development of ground vegetation AGB and LAI of seven plant functional types (PFTs) across seven vegetation types (VTs) within three peatland and forest study areas in northern Finland. We upscaled field-measured AGB and LAI with Sentinel-2 (S2) imagery by applying random forest (RF) regressions. Field-measured AGB peaked around the first week of August and, in most cases, one to two weeks later than LAI. Regarding PFTs, deciduous vascular plants had clear unimodal seasonal patterns, while the AGB and LAI of evergreen vegetation and mosses remained steady over the season. Remote sensing regression models explained 24.2–50.2% of the AGB (RMSE: 78.8–198.7 g m−2) and 48.5–56.1% of the LAI (RMSE: 0.207–0.497 m2 m−2) across sites. Peatland-dominant sites and VTs had a higher prediction accuracy. S2-predicted peak dates of AGB and LAI were one to three weeks earlier than the field-based ones. Our findings suggest that boreal ground vegetation seasonality varies among PFTs and VTs and that S2 time series data can be applied to monitor its spatiotemporal patterns, especially in treeless regions.

Exploring the Potential of Gaofen-1/6 for Crop Monitoring: Generating Daily Decametric-Resolution Leaf Area Index Time Series

High spatiotemporal resolution time series of leaf area index (LAI) are essential for monitoring crop dynamics and validating coarse-resolution LAI products. The optical satellite sensors at decametric-resolution have historically suffered from a long revisit cycle and cloud contamination issues that hampered the acquisition of frequent and high-quality observations. The 16-m/4-day resolution of the new generation Gaofen-1 (GF-1) and Gaofen-6 (GF-6) satellites provide an unprecedented opportunity to address these limitations. Here we developed an effective strategy to generate daily 16-m LAI maps combing GF-1/6 data and ground LAINet measurements. All high-quality GF-1/6 observations were utilized first to derive smoothed time series of vegetation indices (VIs). Second, a random forest regression (RF-r) model was trained to link the VIs with corresponding field LAI measurements. The trained RF-r was finally employed to generate the LAI maps. Results demonstrated the reliability of the reconstructed daily VIs (relative error < 1%) and the derived LAI time series, which greatly benefited from GF-1/6 high frequency observations. The direct comparison with field LAI measurements by LAI-2200/LI-3000 showed the good performance of retrieved LAI maps, with Bias, RMSE and R <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> of 0.05, 0.59 and 0.75, respectively. The LAI time series well captured the spatiotemporal variation of crop growth. Furthermore, the continuous GF-1/6 LAI maps outperformed Sentinel-2 LAI estimates both in terms of temporal frequency and accuracy. Our study indicates the potential of GF-1/6 to generate continuous decametric-resolution LAI maps for fine-scale agricultural monitoring.

Improving Leaf Area Index Estimation With Chlorophyll Insensitive Multispectral Red-Edge Vegetation Indices

As an essential vegetation biophysical trait that determines the plant's structure and photosynthetic capacity, characterizing of leaf area index (LAI) is important for vegetation growth and health monitoring. The empirical models based on vegetation indices (VIs) from remote sensing images is an effective method for deriving LAI. However, due to the coupled impacts of LAI and leaf chlorophyll content (LCC) on canopy reflectance and saturation effect, most VIs cannot achieve a good accuracy of LAI estimation. The remotely sensed red-edge reflectance can provide valuable information to delineate the LAI, therefore a series of leaf chlorophyll insensitive red-edge VIs by using the Sentinel-2 and GF-6 multispectral images are developed in this work to improve the LAI estimation accuracy. The potentials of reflecting LAI variations and sensitivity to LCC changes for each Sentinel-2 and GF-6 red-edge band are comprehensively analyzed based on the PROSAIL model to select the optimal band in VIs design. The proposed VIs are then evaluated in multiple ways, including with PROSAIL simulated datasets, ground measured LAI with canopy spectra and real satellite images. The evaluation results based on field LAI measurements indicate that the proposed red-edge VIs can effectively improve crop LAI estimation accuracy with the best regression coefficient ( <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">R</i> <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> =0.81 for Sentinel-2 and <italic xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">R</i> <sup xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">2</sup> =0.65 for GF-6) among all comparative VIs. Our work showcases incorporating red-edge bands with suitable formula is promising for improving VI-based LAI retrieval, and they offer a practicable solution to fast achieve decameter LAI maps by using the Sentinel-2 or GF-6 images.

Synergy of dual – polarimetric radar vegetation descriptor and Gaussian processes regression algorithm for estimation of leaf area index

ABSTRACT Gaussian Process Regression (GPR) emerged as a powerful algorithm since last decade in many applications. However, it is not fully explored in remote sensing applications, especially for predicting plant biophysical variables in the heterogeneous environment of India. This kernel-based machine learning technique has effectively replaced conventional approaches for estimating vegetation characteristics from remotely sensed data. In this work, an attempt has been made to test the ability of GPR to estimate the leaf area index (LAI) of wheat crops using the Sentinel-1 (S1) derived Dual-Polarized Radar Vegetation Index (DpRVI) and Sentinel-2 (S2) Top of Atmosphere (TOA) products. Further, the ability of the atmospheric correction procedure was tested by S2 Bottom of Atmosphere (BOA) images. To accomplish this, the field measurements of LAI were carried out from January to March 2020. Further comparisons of the GPR’s performance were made with the Artificial Neural Network (ANN) coupled with the PROSAIL (PROSPECT+SAIL) radiative transfer model, available through the Sentinel Application Platform (SNAP) Biophysical processor. The accuracy of the estimated LAI was evaluated using the statistical indicators, for example, coefficient of determination (R 2 ), Root Mean Square Error (RMSE), and Nash Sutcliffe Efficiency (NSE). The results showed that the synergy of the GPR and DpRVI provided the most accurate result (R 2 = 0.822, RMSE = 0.503 m2 m−2, NSE = 0.831) as compared to the GPR and TOA (R 2 = 0.816, RMSE = 0.596 m2 m−2, NSE = 0.803) and SNAP biophysical processor (based on ANN) (R 2 = 0.696, RMSE = 0.760 m2 m−2, NSE = 0.578). Therefore, the study demonstrated the importance of S1 SAR images and GPR as an alternative tool among the other well-established machine learning algorithms to estimate the crop biophysical parameters.

Evaluation of LAI Estimation of Mangrove Communities Using DLR and ELR Algorithms With UAV, Hyperspectral, and SAR Images

The high-precision estimation of mangrove leaf area index (LAI) using a deep learning regression algorithm (DLR) always requires a large amount of training sample data. However, it is difficult for LAI field measurements to collect a sufficient amount of sample data in mangrove wetlands. To tackle this challenge, this paper proposed an approach for expanding training samples and quantitatively evaluated the performance of estimating LAI for mangrove communities using Deep Neural Networks (DNN) and Transformer algorithms. This study also explored the effects of unmanned aerial vehicle (UAV) and Sentinel-2A multispectral, orbital hyper spectral (OHS), and GF-3 SAR images on LAI estimation of different mangrove communities. Finally, this paper evaluated the LAI estimation ability of mangrove communities using ensemble learning regression (ELR) and DLR algorithms. The results showed that: (1) the UAV images achieved the better LAI estimation of different mangrove communities (R2 = 0.5974–0.6186), and GF-3 SAR images were better for LAI estimation of Avicennia marina with high coverage (R2 = 0.567). The optimal spectral range for estimating LAI for mangroves in the optical images was between 650–680 nm. (2) The ELR model outperformed single base model, and produced the high-accuracy LAI estimation (R2 = 0.5266–0.713) for different mangrove communities. (3) The average accuracy (R2) of the ELR model was higher by 0.0019–0.149 than the DLR models, which demonstrated that the ELR model had a better capability (R2 = 0.5865–0.6416) in LAI estimation. The Transformer-based LAI estimation of A. marina (R2 = 0.6355) was better than the DNN model, while the DNN model produced higher accuracy for Kandelia candel (KC) (R2 = 0.5577). (4) With the increase in the expansion ratio of the training sample (10–50%), the LAI estimation accuracy (R2) of DNN and Transformer models for different mangrove communities increased by 0.1166–0.2037 and 0.1037–0.1644, respectively. Under the same estimation accuracy, the sample enhancement method in this paper could reduce the number of filed measurements by 20–40%.

Estimating Biophysical Parameters of Native Grasslands Using Spectral Data Derived from Close Range Hyperspectral and Satellite Data

Estimating biophysical parameters of native grassland enables management changes that affect ecological processes and economic benefits. Although multiple hyperspectral studies were focused on native grasslands, just a few compare data at different scales and among ecoregions. In this study, we compared data collected at different spectral and spatial scales and among Canadian Prairie ecoregions. Field observations indicate that the Fescue Ecoregion grasslands has specific dominant species, while the Moist-Mixed and Mixed Ecoregions share similar dominant species, which is important in determining parameters such as leaf area index (LAI) and canopy height. Hyperspectral measurements showed a specific signature for the Fescue Ecoregion, due to denser canopies, while the Moist-Mixed and Mixed Ecoregions showed similar spectral characteristics to each other. The correlation between biophysical parameters and spectral indices reveals the importance of LAI, since it was significantly correlated with all spectral indices analyzed. The Normalized Difference Vegetation Index (NDVI), Normalized Difference Moisture Index (NDMI), and the Plant Senescence Reflectance Index (PSRI) showed significant correlations with biophysical parameters. The comparison results indicated the PSRI being overestimated at all sites (satellite data) and NDVI underestimated at all sites. Finally, the satellite-derived LAI showed a significant positive relationship with the field-measured LAI.

CubeSat constellations provide enhanced crop phenology and digital agricultural insights using daily leaf area index retrievals

Satellite remote sensing has great potential to deliver on the promise of a data-driven agricultural revolution, with emerging space-based platforms providing spatiotemporal insights into precision-level attributes such as crop water use, vegetation health and condition and crop response to management practices. Using a harmonized collection of high-resolution Planet CubeSat, Sentinel-2, Landsat-8 and additional coarser resolution imagery from MODIS and VIIRS, we exploit a multi-satellite data fusion and machine learning approach to deliver a radiometrically calibrated and gap-filled time-series of daily leaf area index (LAI) at an unprecedented spatial resolution of 3 m. The insights available from such high-resolution CubeSat-based LAI data are demonstrated through tracking the growth cycle of a maize crop and identifying observable within-field spatial and temporal variations across key phenological stages. Daily LAI retrievals peaked at the tasseling stage, demonstrating their value for fertilizer and irrigation scheduling. An evaluation of satellite-based retrievals against field-measured LAI data collected from both rain-fed and irrigated fields shows high correlation and captures the spatiotemporal development of intra- and inter-field variations. Novel agricultural insights related to individual vegetative and reproductive growth stages were obtained, showcasing the capacity for new high-resolution CubeSat platforms to deliver actionable intelligence for precision agricultural and related applications.

Evaluation of Leaf Area Index (LAI) of Broadacre Crops Using UAS-Based LiDAR Point Clouds and Multispectral Imagery

Leaf area index (LAI) is an established structural variable that reflects the 3D leaf layering of vegetation in response to environmental inputs. In this context, unmanned aerial system (UAS)-based methods present a new approach to such plant- to field-scale LAI assessment for precision agriculture applications. This study used UAS-based light detection and ranging (LiDAR) data and multispectral imagery (MSI) as two modalities to evaluate the LAI of a snap bean field, toward eventual yield modeling and disease risk assessment. LiDAR-derived and MSI-derived metrics were fed to multiple biophysical-based and regression models. The correlation between the derived LAI and field-measured LAI was significant. Six LiDAR-derived metrics were fit in eight models to predict LAI, among which the square root of the laser penetration index (LPI) achieved the most accurate prediction result (R²=0.61, nRMSE=19%). The MSI-derived models, which contained both structural features and spectral signatures, provided similar predicting effectiveness, with predicted R²0.5 and nRMSE22%. We furthermore observed variation in model effectiveness for different cultivars, different cultivar groups, and different UAS flight altitudes, for both the LiDAR and MSI approaches. For data collected at a consistent flight altitude, MSI-derived models could even exceed LiDAR-derived models, in terms of accuracy. This finding could support the possibility of replacing LiDAR with more cost-effective MSI-based approaches. However, LiDAR remains a viable modality, since a LiDAR-derived 3D model only required a single predictor variable, while an MSI-derived model relied on multiple independent variables in our case.

Retrieval of Leaf Area Index by Linking the PROSAIL and Ross-Li BRDF Models Using MODIS BRDF Data

Canopy structure parameters (e.g., leaf area index (LAI)) are key variables of most climate and ecology models. Currently, satellite-observed reflectances at a few viewing angles are often directly used for vegetation structure parameter retrieval; therefore, the information content of multi-angular observations that are sensitive to canopy structure in theory cannot be sufficiently considered. In this study, we proposed a novel method to retrieve LAI based on modelled multi-angular reflectances at sufficient sun-viewing geometries, by linking the PROSAIL model with a kernel-driven Ross-Li bi-directional reflectance function (BRDF) model using the MODIS BRDF parameter product. First, BRDF sensitivity to the PROSAIL input parameters was investigated to reduce the insensitive parameters. Then, MODIS BRDF parameters were used to model sufficient multi-angular reflectances. By comparing these reference MODIS reflectances with simulated PROSAIL reflectances within the range of the sensitive input parameters in the same geometries, the optimal vegetation parameters were determined by searching the minimum discrepancies between them. In addition, a significantly linear relationship between the average leaf angle (ALA) and the coefficient of the volumetric scattering kernel of the Ross-Li model in the near-infrared band was built, which can narrow the search scope of the ALA and accelerate the retrieval. In the validation, the proposed method attains a higher consistency (root mean square error (RMSE) = 1.13, bias = −0.19, and relative RMSE (RRMSE) = 36.8%) with field-measured LAIs and 30-m LAI maps for crops than that obtained with the MODIS LAI product. The results indicate the vegetation inversion potential of sufficient multi-angular data and the ALA relationship, and this method presents promise for large-scale LAI estimation.

Comparing vegetation indices from Sentinel-2 and Landsat 8 under different vegetation gradients based on a controlled grazing experiment

Grasslands contribute considerably to the global carbon cycle and livestock production. However, many of the world grasslands suffer from degradation caused mainly by overgrazing. Remote sensing methods are effective tools for monitoring and estimating grassland vegetation parameters. In this study, we compared the performance of vegetation indices (VIs) obtained from two different sensors to estimate grassland vegetation parameters under different vegetation and soil conditions based on typical grassland biomass gradients formed by long-term controlled grazing experiments. Sentinel-2 and Landsat 8 were selected as data sources to estimate two vegetation parameters, fresh aboveground biomass (AGB) and leaf area index (LAI). Field-measured fresh AGB and LAI data were collected from experimental grasslands with different grazing intensities (GI) in Hulunber, Inner Mongolia, China in 2019. Univariate linear mixed models were established between VIs and field measurements, and grazing intensities were considered as random factors. The results confirmed that vegetation parameters (AGB and LAI) and VIs decreased with increasing GI; however, the decreasing trend was insignificant when the GI exceeded 0.69 Au/ha. VIs derived from Sentinel-2 and Landsat 8 estimated fresh AGB and LAI at 80% accuracy. Sentinel-2 derived VIs yielded higher predictive accuracy than Landsat 8 for both fresh AGB and LAI. Comparing with the other VI inversion models, the normalised difference phenology index derived from Sentinel-2 images estimated the vegetation parameters the most effectively and accurately, with a coefficient of determination (R2) of 0.625 and relative root mean square error (RMSE%) of 18.105% for fresh AGB estimation and R2 of 0.559 and RMSE% of 14.953% for LAI estimation.

Validation of Sentinel-2, MODIS, CGLS, SAF, GLASS and C3S Leaf Area Index Products in Maize Crops

We proposed a direct approach to validate hectometric and kilometric resolution leaf area index (LAI) products that involved the scaling up of field-measured LAI via the validation and recalibration of the decametric Sentinel-2 LAI product. We applied it over a test study area of maize crops in northern China using continuous field measurements of LAINet along the year 2019. Sentinel-2 LAI showed an overall accuracy of 0.67 in terms of Root Mean Square Error (RMSE) and it was used, after recalibration, as a benchmark to validate six coarse resolution LAI products: MODIS, Copernicus Global Land Service 1 km Version 2 (called GEOV2) and 300 m (GEOV3), Satellite Application Facility EUMETSAT Polar System (SAF EPS) 1.1 km, Global LAnd Surface Satellite (GLASS) 500 m and Copernicus Climate Change Service (C3S) 1 km V2. GEOV2, GEOV3 and MODIS showed a good agreement with reference LAI in terms of magnitude (RMSE ≤ 0.29) and phenology. SAF EPS (RMSE = 0.68) and C3S V2 (RMSE = 0.41), on the opposite, systematically underestimated high LAI values and showed systematic differences for phenological metrics: a delay of 6 days (d), 20 d and 24 d for the start, peak and the end of growing season, respectively, for SAF EPS and an advance of −4 d, −6 d and −6 d for C3S.

Integration of a Crop Growth Model and Deep Learning Methods to Improve Satellite-Based Yield Estimation of Winter Wheat in Henan Province, China

Timely and accurate regional crop-yield estimates are crucial for guiding agronomic practices and policies to improve food security. In this study, a crop-growth model was integrated with time series of remotely sensed data through deep learning (DL) methods to improve the accuracy of regional wheat-yield estimations in Henan Province, China. Firstly, the time series of moderate-resolution imaging spectroradiometer (MODIS) normalized difference vegetation index (NDVI) were input into the long short-term memory network (LSTM) model to identify the wheat-growing region, which was further used to estimate wheat areas at the municipal and county levels. Then, the leaf area index (LAI) and grain-yield time series simulated by the Crop Environment REsource Synthesis for Wheat (CERES-Wheat) model were used to train and evaluate the LSTM, one-dimensional convolutional neural network (1-D CNN) and random forest (RF) models, respectively. Finally, an exponential model of the relationship between the field-measured LAI and MODIS NDVI was applied to obtain the regional LAI, which was input into the trained LSTM, 1-D CNN and RF models to estimate wheat yields within the wheat-growing region. The results showed that the linear correlations between the estimated wheat areas and the statistical areas were significant at both the municipal and county levels. The LSTM model provided more accurate estimates of wheat yields, with higher R2 values and lower root mean square error (RMSE) and mean relative error (MRE) values than the 1-D CNN and RF models. The LSTM model has an inherent advantage in capturing phenological information contained in the time series of the MODIS-derived LAI, which is important for satellite-based crop-yield estimates.

Estimating the phenological dynamics of irrigated rice leaf area index using the combination of PROSAIL and Gaussian Process Regression

The growth of rice is a sequence of three different phenological phases. This sequence of change in rice phenology implies that the condition of the plant during the vegetative phase relates directly to the health of leaves functioning during the reproductive and ripening phases. As such, accurate monitoring is important towards understanding rice growth dynamics. Leaf Area Index (LAI) is an important indicator of rice yields and the availability of this information during key phenological phases can support more informed farming decisions. Satellite remote sensing has been adopted as a proxy to field measurements of LAI and with the launch of freely available high resolution Satellite images such as Sentinel-2, it is imperative that accurate retrieval methods are adopted towards monitoring LAI at irrigated rice fields. Here, we evaluate the potential of a hybrid radiative transfer model (i.e., PROSAIL - Gaussian Process Regression (GPR), for estimating the phenological dynamics of irrigated rice LAI using imager derived from the Sentinel-2 multispectral instrument. LAI field measurements were obtained from an experimental rice field in Nasarawa state, Nigeria during the dry season. We used the PROSAIL radiative transfer model to create a look up table (LUT) that was subsequently used to train a GPR model. Afterwards, we evaluated the potential of the hybrid modelling approach by assessing the overall model accuracy and the extent to which LAI was able to accurately predict LAI during key rice phenological phases. We compared the predicted hybrid GPR LAI values with LAI values generated from the SNAP toolbox, based on a hybrid Artificial Neural Network (ANN) modelling approach. Our results show that the overall predictive accuracy of the hybrid GPR model (R2 = 0.82, RMSE = 1.65) was more accurate than that of the hybrid ANN model (R2 = 0.66, RMSE = 3.89) for retrieving LAI values from Sentinel-2 imagery. Both models underestimated LAI values during the reproductive and ripening phases . However, the accuracy during the phenological phases were more significant when using the hybrid GPR model (P < 0.05). During the different phenological phases, the hybrid GPR model predicted LAI more accurately during the reproductive (R2 = 0.7) and ripening (R2 = 0.59) phases compared to the hybrid ANN reproductive and ripening phases. When monitoring LAI phenological profiles of both hybrid models, the hybrid GPR and ANN models underestimated LAI during the reproductive and ripening phases. However, the ANN model underestimations were statistically significantly greater than those for the hybrid GPR model (P < 0.05). Our results highlight the potential of hybrid GPR models for estimating the phenological dynamics of irrigated rice LAI from Sentinel-2 data. They provided more accurate estimation of LAI patterns from varying nitrogen and water applications than hybrid ANN models.

Spaceborne Estimation of Leaf Area Index in Cotton, Tomato, and Wheat Using Sentinel-2

Satellite remote sensing is a useful tool for estimating crop variables, particularly Leaf Area Index (LAI), which plays a pivotal role in monitoring crop development. The goal of this study was to identify the optimal Sentinel-2 bands for LAI estimation and to derive Vegetation Indices (VI) that are well correlated with LAI. Linear regression models between time series of Sentinel-2 imagery and field-measured LAI showed that Sentinel-2 Band-8A—Narrow Near InfraRed (NIR) is more accurate for LAI estimation than the traditionally used Band-8 (NIR). Band-5 (Red edge-1) showed the lowest performance out of all red edge bands in tomato and cotton. A novel finding was that Band 9 (Water vapor) showed a very high correlation with LAI. Bands 1, 2, 3, 4, 5, 11, and 12 were saturated at LAI ≈ 3 in cotton and tomato. Bands 6, 7, 8, 8A, and 9 were not saturated at high LAI values in cotton and tomato. The tomato, cotton, and wheat LAI estimation performance of ReNDVI (R2 = 0.79, 0.98, 0.83, respectively) and two new VIs (WEVI (Water vapor red Edge Vegetation Index) (R2 = 0.81, 0.96, 0.71, respectively) and WNEVI (Water vapor narrow NIR red Edge Vegetation index) (R2 = 0.79, 0.98, 0.79, respectively)) were higher than the LAI estimation performance of the commonly used NDVI (R2 = 0.66, 0.83, 0.05, respectively) and other common VIs tested in this study. Consequently, reNDVI, WEVI, and WNEVI can facilitate more accurate agricultural monitoring than traditional VIs.

Improved retrieval of land surface biophysical variables from time series of Sentinel-3 OLCI TOA spectral observations by considering the temporal autocorrelation of surface and atmospheric properties

Estimation of essential vegetation properties from remote sensing is crucial for a quantitative understanding of the Earth system. Ill-posedness of the model inversion problem leads to multiple interpretations of one satellite observation, and using prior information is a promising way to reduce the ill-posedness and increase the accuracy of land surface products. Tobler's first law of geography states that “everything is related to everything else, but near things are more related than distant things”. Likewise, it is expected that the state of an object at a single moment is related to the state at every other moment, but temporally near attributes are more related than distant ones. This temporal autocorrelation is a vital source of prior information and can be used to improve the retrieval accuracy. In this study, we develop a retrieval framework that makes use of the temporal autocorrelation and dependence of land surface and atmospheric properties. We apply this retrieval algorithm to Sentinel-3 Ocean and Land Colour Instrument (OLCI) satellite data to derive land surface biophysical variables with a focus on leaf area index (LAI) from top-of-atmosphere (TOA) radiance observations. The results from both a synthetic dataset and a real satellite dataset show that the use of the temporal continuity as a priori information improves the accuracy of the estimation of land surface properties, such as leaf chlorophyll content and LAI. Compared with the MODIS LAI products, much less unrealistic short-term fluctuations are found in the LAI retrievals from OLCI with the time-series retrieval approach across different land cover types including cropland, forest and savannah. Field measurements of LAI at two forest sites quantitatively confirm that the estimated LAI from OLCI is reasonably accurate with R2 > 0.65 and RMSE < 1.00 m2m−2. Overall, the time series retrieval results in more robust and smoother time series than standard retrievals of LAI from individual scenes, more stable retrievals than the MODIS LAI product, and values of LAI that match better with reported measurements in the field. The present retrieval framework can make better use of time series of spectral observations and potentially of multi-sensor observations.