It is known that inertial lift forces can lead to particle focusing in channel flows; yet oscillatory straining effects have also been suggested as a mechanism for particle focusing in wavy channels. To explore the synergy between these two mechanisms, we analytically and experimentally investigate the focusing behaviour of rigid neutrally buoyant particles in a wavy channel. We decompose the particle-free channel flow into a primary Poiseuille flow and secondary eddies induced by the waviness. We calculate the perturbation of the particle on the particle-free flow and the resulting lateral lift force exerted on the particle using the method of matched asymptotic expansions. This yields a zeroth-order lift force arising from the Poiseuille flow and a first-order lift force due to the waviness of the channel. We further incorporate the inertial lift force into the Maxey–Riley equation and simulate particle trajectories in wavy channels. The interactions between the zeroth-order lift force and the particle-free flow largely determine the focusing locations. Experiments in wavy channels with varying amplitudes at channel Reynolds numbers ranging from 5 to 250 are consistent with the predictions of the focusing locations, which are mainly governed by the channel Reynolds number as well as the competition between the inertial lift and the oscillatory straining effects.