Larger Leaf Research Articles

Community structure of thermophilic photosynthetic microbial mats and flocs at Sembawang Hot Spring, Singapore.

The Sembawang Hot Spring in Singapore lies at the foot of a major regional geological feature called the Bentong-Raub Suture Zone. Amid an extensively managed surface geothermal park, an undisturbed hot spring emerges with source water at 61°C, pH 6.8, and 1 mg/L dissolved sulfide. A small main pool at the source supported orange-green benthic flocs, whereas the outflow channel with gradually less extreme environmental stress supported extensive vivid green microbial mats. Microscopy revealed that cyanobacterial morphotypes were distinct in flocs and mats at several intervals along the environmental gradient, and we describe a spiraling pattern in the oscillatorian cyanobacteria that may reflect response to poly-extreme stress. Estimation of diversity using 16S rRNA gene sequencing revealed assemblages that were dominated by phototrophic bacteria. The most abundant taxa in flocs at 61°C/1 mg/L sulfide were Roseiflexus sp. and Thermosynechococcus elongatus, whilst the mats at 45.7-55.3°C/0-0.5 mg/L sulfide were dominated by Oscillatoriales cyanobacterium MTP1 and Chloroflexus sp. Occurrence of diverse chemoautotrophs and heterotrophs reflected known thermal ranges for taxa, and of note was the high abundance of thermophilic cellulolytic bacteria that likely reflected the large allochthonous leaf input. A clear shift in ASV-defined putative ecotypes occurred along the environmental stress gradient of the hot spring and overall diversity was inversely correlated to environmental stress. Significant correlations for abiotic variables with observed biotic diversity were identified for temperature, sulfide, and carbonate. A network analysis revealed three putative modules of biotic interactions that also reflected the taxonomic composition at intervals along the environmental gradient. Overall, the data indicated that three distinct microbial communities were supported within a small spatial scale along the poly-extreme environmental gradient. The findings add to the growing inventory of hot spring microbiomes and address an important biogeographic knowledge gap for the region.

Impact of different types of green manure on pests and disease incidence and severity as well as growth and yield parameters of maize

The emergence of pests and diseases, including the maize streak virus, leaf blight, the African stem borer, and gray leaf spot, poses a persistent threat to maize production (Zea mays L. cv: DMR-ESR-Yellow) around the world. A field experiment was conducted at the School of Agriculture experimental site, Njala University, Sierra Leone, during a two-year period (2020–2021) to assess the effects of green manure on pest and disease incidence and severity as well as growth and yield parameters of maize. The experiment was laid out in a randomized complete block design (RCBD) with three replications and four treatments: Cal. 3 t.ha−1, Cal. 6 t.h−1, Pan. 3 t.h−1, Pan 6 t.ha−1 and a control plot amended with 200 kg ha−1 of N (urea) and NPK 15:15:15 ha−1 split application. The study showed that gray leaf spot damage was the most severe infection among all treatments. Therefore, the effects of the most severe disease and pest of maize in Sierra Leone can be minimized by applying green manure. Moreover, results reveal that Calopogonium- Pueraria mixture amended plots showed significant performance in the measured growth parameters viz. highest leaf number, large leaf area stem girth, superior plant height, best ear height (64.6–78.5 cm), higher cob yield (1.2–1.4 t.ha−1) ear (1.8–2.1 t.ha−1) and dry grain yield (0.5–0.7 ha−1). Panicum green manure results showed that prompt and adequate application, as well as decomposition of green manures, is imperative for the successful conservation and sustainability of maize farming systems. The findings of this research could improve the efficiency of green manure use in pest, disease, and crop management systems.

Common population characteristics of direct‐seeded hybrid indica rice for high yield

AbstractDirect seeding of rice has attracted attention because of its simplicity and rapidity compared with traditional cultivation methods. However, the geographical location of the rice region in Southwest China is complex, and the common characteristics of high yield of direct seeding hybrid indica rice and the law of nutrient absorption and accumulation are still unclear. This study results demonstrated that the mean yield of high‐yield varieties (HYV) in the two ecological points increased by 17.68%–19.98% and 17.37%–27.06%, respectively, compared with low‐yield varieties (LYV). The high tillering ability and effective tillering rate of HYV promoted a large leaf area index (LAI) and a strong photosynthetic capacity and stimulated the accumulation of aboveground biomass and nitrogen, phosphorus, and potassium nutrients in rice plants, which were finally transported and allocated to the grains to maintain high yields. Correlation analysis indicated that yield and its components were closely related to spatial population structure and nutrient accumulation and allocation. In particular, LAI at the full heading stage, net photosynthetic rate, aboveground biomass from jointing to maturity stage, and nitrogen, phosphorus, and potassium accumulation and distribution from jointing to full heading stage have the strongest correlation with yield and its components. Therefore, improving the effective tillering rate and LAI, as well as the accumulation and distribution of aboveground biomass, nitrogen, phosphorus, and potassium of rice plants from jointing to full heading stage, are the common laws for the formation of high yield of direct seeding hybrid rice in different ecological areas.

The Impacts of Nitrogen Accumulation, Translocation, and Photosynthesis on Simultaneous Improvements in the Grain Yield and Gluten Quality of Dryland Wheat

The effects of nitrogen (N) accumulation and translocation on photosynthesis have been widely reported, while the impacts of N accumulation, translocation, and photosynthesis on simultaneous improvements in the grain yield and gluten quality of dryland wheat still remain unclear. For this reason, the relationships between photosynthesis, N use efficiency (NUE), and related traits and grain yield, gluten quality, and the related traits of 11 representative wheat genotypes in the 2018–2021 cropping years were examined. The results show that the grain weights per spike accounted for 58.7% and 42.4% of genetic variations in the grain yield and grain protein contents, respectively. Meanwhile, N accumulation at the maturity stage caused a 49.5% genetic variation in the grain protein contents. The gluten index of MY26 and NM101 significantly decreased with a decrease in the grain number per spike in the 2018–2019 cropping season. The precipitation reduced by 53.8% in the 2019–2020 cropping season, resulting in a gluten index that increased by 13.0%. CY25 and NM101 showed high gluten quality without reducing the yield due to the high net photosynthetic rate, big grain size, large leaf area index, and high grain number per spike, respectively. Our results indicated that increasing the grain weight per spike and individual N accumulation at the maturity stage via genotype selection for a big grain size, large leaf area index, and high net photosynthetic rate simultaneously improved the grain yield and gluten quality of dryland wheat. Moreover, the effect of the genotype–environment interaction on the gluten index was related to the N translocation regulated by canopy senescence, and N translocation was affected by the source N supply associated with the net photosynthetic rate and sink N demands in relation to the grain number per spike under dryland soil conditions.

Identification of qBK2.1, a novel QTL controlling rice resistance against Fusarium fujikuroi

BackgroundBakanae disease caused by Fusarium fujikuroi is an increasing threat to rice production. The infected plants show symptoms such as elongation, slenderness, chlorosis, a large leaf angle, and even death. Bakanae disease is traditionally managed by seed treatment. However, fungicide-resistant F. fujikuroi isolates have emerged in several Asian areas, including Taiwan. This study aimed to identify new bakanae resistance quantitative trait loci (QTLs) and provide molecular markers to assist future breeding.ResultsA population of F2:9 recombinant inbred lines (RILs) was derived from the cross between an elite japonica Taiwanese cultivar ‘Taikeng 16 (TK16)’ and an indica variety ‘Budda’. ‘Budda’ was found highly resistant to all 24 representative isolates of the F. fujikuroi population in Taiwan. For the RIL population, 6,492 polymorphic single nucleotide polymorphisms (SNPs) spanning the rice genome were obtained by genotyping-by-sequencing (GBS) technique, and the disease severity index (DSI) was evaluated by inoculation with a highly virulent F. fujikuroi isolate Ff266. Trait-marker association analysis of 166 RILs identified two QTLs in ‘Budda’. qBK2.1 (21.97–30.15 Mb) is a novel and first bakanae resistance QTL identified on chromosome 2. qBK1.8 (5.24–8.66 Mb) partially overlaps with the previously reported qBK1.3 (4.65–8.41 Mb) on chromosome 1. The log of odds (LOD) scores of qBK1.8 and qBK2.1 were 4.75 and 6.13, accounting for 4.9% and 8.1% of the total phenotypic variation, respectively. 64 RILs carrying both qBK1.8 and qBK2.1 showed lower DSI (7%) than the lines carrying only qBK1.8 (15%), only qBK2.1 (13%), or none of the two QTLs (21%). For the future application of identified QTLs, 11 KBioscience competitive allele-specific PCR (KASP) markers and 3 insertion-deletion (InDel) markers were developed.ConclusionsCompared to other important rice diseases, knowledge of bakanae resistance has been insufficient, which limited the development and deployment of resistant cultivars. The discovery of qBK2.1 has provided a new source of bakanae resistance. The resistant RILs inheriting good plant type, good taste, and high yield characteristics from ‘TK16’ can be used as good resistance donors. Our newly developed markers targeting qBK2.1 and qBK1.8 can also serve as an important basis for future fine-mapping and resistance breeding.

Large leaf hydraulic safety margins limit the risk of drought‐induced leaf hydraulic dysfunction in Neotropical rainforest canopy tree species

Abstract The sequence of key water potential thresholds from the onset of water stress to mortality, and the timing of stomatal closure with regard to leaf xylem embolism formation are essential to characterizing plant adaptive strategies to drought. This constitutes a critical knowledge gap for tropical rainforest species, which may be less vulnerable to drought than previously thought. We recorded key leaf and stem water potential thresholds, leaf hydraulic safety margins (HSMleaf), leaf stomatal safety margins (SSMleaf) and estimated native embolism levels during a normal‐intensity dry season across 18 neotropical rainforest tree species. We also solved a sequence of key water potential thresholds. Additionally, we provide a cross‐biome analysis of SSMleaf encompassing 97 species from four major biomes based on a literature survey. In the studied rainforest species, leaf turgor loss point, used as a surrogate for stomatal closure, typically occurred before the onset of leaf xylem embolism. Most species exhibited positive HSMleaf and SSMleaf, with contrasting values across species and nearly absent embolism levels during the dry season irrespective of the experienced midday leaf water potentials. Our results point out that leaf xylem embolism is not routine for Neotropical rainforest tree species. Based on our proposal of the water potential sequence for tropical rainforest trees, we argue that leaf xylem embolism is a rare event for these species. This was supported by the literature survey, indicating that across biomes, most woody species have rather large SSMleaf and that leaves of tropical rainforest trees are not necessarily more vulnerable than in other biomes. However, we found evidence that some tropical rainforest species may be more vulnerable than others to ongoing climate change. Our data provide an opportunity to parametrize tree‐based or land‐surface models for tropical rainforests. Read the free Plain Language Summary for this article on the Journal blog.

Integrative analysis of physiology, biochemistry and transcriptome reveals the mechanism of leaf size formation in Chinese cabbage (Brassica rapa L. ssp. pekinensis).

The leaf, the main product organ, is an essential factor in determining the Chinese cabbage growth, yield and quality. To explore the regulatory mechanism of leaf size development of Chinese cabbage, we investigated the leaf size difference between two high-generation inbred lines of Chinese cabbage, Y2 (large leaf) and Y7 (small leaf). Furtherly, the transcriptome and cis-acting elements analyses were conducted. According to our results, Y2 exhibited a higher growth rate than Y7 during the whole growth stage. In addition, the significant higher leaf number was observed in Y2 than in Y7. There was no significant difference in the number of epidermal cells and guard cells per square millimeter between Y2 and Y7 leaves. It indicated that cell numbers caused the difference in leaf size. The measurement of phytohormone content confirmed that GA1 and GA3 mainly play essential roles in the early stage of leaf growth, and IPA and ABA were in the whole leaf growth period in regulating the cell proliferation difference between Y2 and Y7. Transcriptome analysis revealed that cyclins BraA09g010980.3C (CYCB) and BraA10g027420.3C (CYCD) were mainly responsible for the leaf size difference between Y2 and Y7 Chinese cabbage. Further, we revealed that the transcription factors BraA09gMYB47 and BraA06gMYB88 played critical roles in the difference of leaf size between Y2 and Y7 through the regulation of cell proliferation. This observation not only offers essential insights into understanding the regulation mechanism of leaf development, also provides a promising breeding strategy to improve Chinese cabbage yield.

Evaluation of Morpho-physiological Variations in Pigeon Pea for Weed Suppression and Yield Potentials in Southern Agro-ecologies of Nigeria

A study was conducted at Ibadan (Derived savanna), Ife (Rainforest), and Kishi (southern Guinea savanna-northern fringe) to ascertain the agronomic potentials and variation in early interference traits for weed suppression in pigeon pea in southern agro-ecologies of Nigeria. The experimental site was marked out into 4 x 4 m plots and twenty (20) genotypes were randomly assigned with three replicates. Results showed that across genotypes in all locations, NSWCC-29B-1 had the tallest plants. However, NSWCC-46 had the shortest plants. Genotypes sown at Ife were the tallest across locations. This might have resulted from superior growth factors in Ife. Tall crop plants compete and suppress weeds more than short crop plants. NSWCC-19 had the largest leaf area across genotypes and locations at 20 WAP. Genotypes sown at Ife had the broadest leaves across the locations. Large leaf area enhances canopy formation, weed suppression, and light interception for improved grain yield. NSWCC-7D had the broadest canopy width; though, similar to NSWCC-24, NSWCC-29B-1, NSWCC-27A, and AO/TB 79-9. Broad canopy width is loftier for weed suppression and crop yield. NSWCC-24 had the highest grain yield across genotypes in all locations. Plants sown in Ibadan and Ife had better and similar grain yields than Kishi, which was about 50% lower than other locations. NSWCC-7D, NSWCC-29A, NSWCC-35, NSWCC-46B, NSWCC-35A, NSWCC-34, NSWCC-29B-1, NSWCC-27A, NSWCC-24, CITA 3, AO/TB 79-9 and NSWCC/8B showed promising potentials for weed suppression and grain yield in all the agro-ecologies.

Growth, Xylem Vulnerability to Cavitation and Leaf Cell Response to Dehydration in Tree Seedlings of the Caribbean Dry Forest

The characterisation of ecological strategies to predict drought response is still lacking for Caribbean dry forest seedlings. This study documents growth characteristics and tolerance to drought via xylem hydraulic and leaf cell properties of three dominant native species of the Caribbean dry forest. Twenty morphological and physiological traits were assessed in Citharexylum spinosum, Guaiacum officinale and Guapira fragrans in greenhouse conditions. The seedlings displayed contrasting growth rates, which were positively correlated with the capacity to quickly develop a large leaf area and root fraction. The three species had a similar xylem tolerance to embolism (P50: −4 MPa) but differed in leaf cell tolerance to dehydration, which was negatively correlated with RGR (R2 > 0.87). The slowest-growing, G. officinale, had high leaf tolerance to cell dehydration due to low ΨTLP and πo, but displayed a narrow hydraulic safety margin. The leaves of the fast-growing C. spinosum were sensitive to leaf dehydration but exhibited a surprisingly wide stem hydraulic safety margin. G. fragrans had intermediate traits. Our results showed that dry forest seedling growth in similar environments can exhibit distinct carbon growth strategies as well as contrasting water-use strategies, primarily as they relate to drought resistance, due to variation in root development and leaf cell resistance to dehydration. Our study thus provides an approach to estimate species performance under drought conditions.

Comparison of Agronomic Parameters and Nutritional Composition on Red and Green Amaranth Species Grown in Open Field Versus Greenhouse Environment

Previously, researchers have not paid attention to indigenous African leafy vegetables such as nightshade and kale, however, amaranth species have recently gained popularity due to their adaptability to various climatic conditions and their cultivation in both open fields and hydroponics. Amaranth species are ranked among the underutilized leafy vegetables with medicinal properties, economic values, nutritional and health benefits. This study aimed to compare the growth parameters and nutritional composition of two consumed red (Amaranthus Cruentus L.) and green (Amaranthus Graecizans L.) amaranth species in South Africa, cultivated in an open field versus a greenhouse. The findings showed a high chlorophyll content and large leaf area under open field conditions on red and green species. The number of leaves and stem height were higher in the greenhouse cultivation system. In open field cultivation, minerals such as calcium, magnesium, phosphorus, iron, zinc, aluminium, copper and manganese for both species were significantly higher whilst potassium, sodium, boron, sulphur were significantly higher in the greenhouse production. The sufficient total nitrogen and ash were recorded in the open field production, and no significant difference was observed between the open field and greenhouse on moisture and ash content of A. Cruentus. In conclusion, A. Cruentus and A. Graecizansn grown in an open field had higher proximate and mineral composition over the greenhouse cultivation system.

First Report of Leaf Spot on water convolvulus Caused by Stemphylium solani in Yunnan Province, China.

Water convolvulus (Ipomoea aquatica Forsk.), a member of the Convolvulaceae family, is an important tropical vegetable cultivated in China (Liu et al. 2017). From 2016 to 2020, dark-brown leaf spots were observed in major water convolvulus (cv. Large leaf) growing areas (2 ha) in Honghe City (24°12' N, 103°6' E), Yunnan Province, China. Field investigations showed that a leaf spot disease occurred on water convolvulus in four fields with 15% incidence (50 plants in each field were investigated) and resulted in up to a 10% decrease in its total production. Symptoms on water convolvulus plants appeared as small lesions, yellowish-green and circular on the leaves. Ten plants were selected randomly from the growing area, with three diseased leaves collected from each plant. Symptomatic tissues were excised, surface sterilized with 75% ethanol for 30 s, washed in sterile-distilled water three times, and placed on the Potato Dextrose Agar (PDA) followed by incubation at 25°C in the dark for 7 days. Colonies on PDA were gray to green in color and fuzzy in the middle, with irregular borders. Conidiophore morphology showed single, yellowish-brown or brown structures with 1~6 septa, and long 22~125 µm, wide 3.5~5.5 µm. Conidia were elliptical, black-brow, solitary, with a smooth surface, 1~6 longitudinal septa and 1~3 transverse septa, 20~30 µm in length, and 15~22 µm in width. The morphological characteristics of the fungus were consistent with the description of Stemphylium solani (Chai et al. 2014; Weber, 1930). To further confirm the identity of the 30 isolates, the partial gapdh (glyceraldehyde-3-phosphate dehydrogenase), tef1 (translation elongation factor 1-alpha), cmdA (Calmodulin) and ITS (intemal transcribed spacers) sequences were amplified by PCR with the primer pairs of gpd1/gpd2, EF1-728F/EF1-986R, CALDF1/CALDR2 and ITS1/ITS4, respectively (Berbee et al. 1999; Carbone & Kohn. 1999; Lawrence et al. 2013; White et al. 1990). Multiple sequence alignments were generated using MEGA7, and phylogenetic analysis was conducted with the neighbor-joining (NJ) method (Tamura et al. 2007), the results indicated that all sequences from the 30 isolates were identical. Thus, one representative isolate, KXC11033003 was chosen for further analysis. The ITS, gapdh, cmdA and tef1 sequences of this isolate were submitted to the NCBI GenBank database (accession nos. OL444947~OL444950). The strain KXC11033003 and S. solani (CBS-408.54) formed a clade with 82% bootstrap value (Figure S2). To fulfill Koch's postulates, 30 plants were inoculated for each of the thirty isolates. Conidia were sprayed on leaves of water convolvulus (8-true-leaf stage) in a suspension of 107 conidia/mL or water as a healthy control in a greenhouse at 15~18℃ (night) / 25~28℃ (day) with 95% humidity. Symptoms of dark brown spots appeared on the leaves after 7 days, whereas controls remained healthy The pathogens were reisolated from the lesions and confirmed identical to the original isolate by gene sequences. No pathogens were isolated from the control plants. To our knowledge, this is the first report of leaf spot caused by S. solani on water convolvulus in Yunnan Province, China. Further, Stemphylium leaf spot caused by S. solani has been reported previously on tomato, garlic, pepper (Zheng et al.2008; Nasehi et al.2018). This study stresses the need to identify appropriate management strategies for S. solani that help prevent quality and yield losses in water convolvulus in China.

Construction of a high-density genetic map and dissection of genetic architecture of six agronomic traits in tobacco (Nicotiana tabacum L.).

Tobacco (Nicotiana tabacum L.) is an economic crop and a model organism for studies on plant biology and genetics. A population of 271 recombinant inbred lines (RIL) derived from K326 and Y3, two elite flue-cured tobacco parents, has been constructed to investigate the genetic basis of agronomic traits in tobacco. Six agronomic traits including natural plant height (nPH), natural leaf number (nLN), stem girth (SG), inter-node length (IL), length of the largest leaf (LL) and width of the largest leaf (LW) were measured in seven environments, spanning the period between 2018 and 2021. We firstly developed an integrated SNP-indel-SSR linkage map with 43,301 SNPs, 2,086 indels and 937 SSRs, which contained 7,107 bin markers mapped on 24 LGs and covered 3334.88 cM with an average genetic distance of 0.469cM. Based on this high-density genetic map, a total of 70 novel QTLs were detected for six agronomic traits by a full QTL model using the software QTLNetwork, of which 32 QTLs showed significant additive effects, 18 QTLs showed significant additive-by-environment interaction effects, 17 pairs showed significant additive-by-additive epistatic effects and 13 pairs showed significant epistasis-by-environment interaction effects. In addition to additive effect as a major contributor to genetic variation, both epistasis effects and genotype-by-environment interaction effects played an important role in explaining phenotypic variation for each trait. In particular, qnLN6-1 was detected with considerably large main effect and high heritability ( =34.80%). Finally, four genes including Nt16g00284.1, Nt16g00767.1, Nt16g00853.1, Nt16g00877.1 were predicted as pleiotropic candidate genes for five traits.

LG5, a Novel Allele of EUI1, Regulates Grain Size and Flag Leaf Angle in Rice.

Grain size and flag leaf angle are two important traits that determining grain yield in rice. However, the mechanisms regulating these two traits remain largely unknown. In this study, a rice long grain 5 (lg5) mutant with a large flag leaf angle was identified, and map-based cloning revealed that a single base substitution followed by a 2 bp insertion in the LOC_Os05g40384 gene resulted in larger grains, a larger flag leaf angle, and higher plant height than the wild type. Sequence analysis revealed that lg5 is a novel allele of elongated uppermost internode-1 (EUI1), which encodes a cytochrome P450 protein. Functional complementation and overexpression tests showed that LG5 can rescue the bigger grain size and larger flag leaf angle in the Xiushui11 (XS) background. Knockdown of the LG5 transcription level by RNA interference resulted in elevated grain size and flag leaf angle in the Nipponbare (NIP) background. Morphological and cellular analyses suggested that LG5 regulated grain size and flag leaf angle by promoting cell expansion and cell proliferation. Our results provided new insight into the functions of EUI1 in rice, especially in regulating grain size and flag leaf angle, indicating a potential target for the improvement of rice breeding.

Hydraulic determinants of drought-induced tree mortality and changes in tree abundance between two tropical forests with different water availability

Because of climate change, extreme droughts have become more frequent and caused widespread tree mortality, and thus significant shifts in community structure and function in many forests. Hydraulic failure is a major cause of drought-induced tree mortality. However, its effects on tree dynamics during repeated extreme droughts in tropical forests with different soil water availability are poorly understood. In this study, we surveyed the mortality rate and change in abundance (basal area) for 29 tree species from a humid tropical ravine rainforest (TRF) and an adjacent dry tropical karst forest (TKF) between 2004 and 2015. During this period, two extreme droughts occurred. We measured leaf and stem hydraulic-related traits and analyzed the trait–demography relationships. Our results showed that repeated extreme droughts induced an increase in tree mortality, and thus significantly affected the change of species abundance in the two forest communities. In both forests, the tree species with higher stem embolism resistance were more likely to survive extreme droughts, and increased in basal area during the census period. Moreover, the tree species in the two forests exhibited contrasting hydraulic strategies to deal with extreme drought. The lower mortality rate was associated with larger leaf and stem hydraulic safety margins in the TRF, but with more negative leaf hydraulic safety margin and stronger vulnerability segmentation (larger difference in embolism resistance between leaf and stem) in the TKF. This study expands our understanding of the hydraulic mechanisms to cope with extreme droughts in tropical tree species grown in different substrates under the present and future climatic conditions.

Leaf economics fundamentals explained by optimality principles.

The life span of leaves increases with their mass per unit area (LMA). It is unclear why. Here, we show that this empirical generalization (the foundation of the worldwide leaf economics spectrum) is a consequence of natural selection, maximizing average net carbon gain over the leaf life cycle. Analyzing two large leaf trait datasets, we show that evergreen and deciduous species with diverse construction costs (assumed proportional to LMA) are selected by light, temperature, and growing-season length in different, but predictable, ways. We quantitatively explain the observed divergent latitudinal trends in evergreen and deciduous LMA and show how local distributions of LMA arise by selection under different environmental conditions acting on the species pool. These results illustrate how optimality principles can underpin a new theory for plant geography and terrestrial carbon dynamics.

In vitro and ex vitro production of Schomburgkia crispa: effect of flask sealing systems and different light sources

Abstract The extraction of native orchids from natural habitats is relevant for the reduction of populations in the Cerrado biome, making it necessary to establish practices aiming their production both for reintroduction and commercialization. The objective here is to evaluate light sources and sealing systems on the in vitro and ex vitro growth of Schomburgkia crispa. Two flask sealing systems were tested: conventional (CSS) and with gas exchange (SSGE), and eight light sources: FL1-100% white LED, FL2-100% blue LED, FL3-100% red LED, FL4-50% white + 25% red + 25% blue LED, FL5-50% red + 50% blue LED, FL6-25% red + 75% blue LED, FL7-75% red + 25% blue LED, and FL8- with fluorescent lamp, with five replications in each treatment. A completely randomized design was adopted with a 2x8 factorial scheme (vial sealing system x light sources). After 120 days of cultivation in vitro and 180 days ex vitro, the plants were evaluated as for number of leaves, roots and shoots, plant height, pseudobulb diameter, length of the largest root, largest leaf, and fresh mass. For the in vitro growth, the use of SSGE together with the light sources blue and red favors the cultivation of S. crispa. For the ex vitro growth, the cultivation in vitro in SSGE together with FL4 affects the acclimatization of plants.

The Association between Root Microbiome Diversity of Yunnan Large Leaf Tea Trees and Soil pH

The Association between Root Microbiome Diversity of Yunnan Large Leaf Tea Trees and Soil pH

Effect of Hydrogen Peroxide and Vermicompost on Germination and Development of Vigna Mungo

With the aim of securing the nutritional security with legumes the study aims at the effect of hydrogen peroxide and vermicompost on germination as well as morphology of Vigna mungo. Before sowing the seeds were treated with hydrogen peroxide as well as vermicompost. Then after sowing observations were made on the percentage of germination, plant height, number of leaves, width and height of leaves, area of leaves and root length and nodule formation. The percentage of germination is calculated after 7 days of seed sowing. The plant height was measured at 6, 12, 17, 24, 35 and 42 days after seed germinating with the help of measuring scale. The root length was measured after 16 and 25 days of germination. The leaf width and length were also measured with the help of measuring scale and leaf area was calculated on this basis. From the experiment conducted it was found that the seed germination percentage was highest in Vermicompost treated soil in Vigna mungo. The germination percentage in treatment with vermicompost (T3) was highest 95% then followed by 85% germination rate in treatment with hydrogen peroxide (T2) and the least 65% in the control (T1). Moreover, the seeds treated with vermicompost show tremendous increase in plant height, increase in number of leaves and relatively large leaf area compared to the seeds treated with hydrogen peroxide and then followed by control. Therefore, the study recommends the use of vermicompost over any inorganic material or chemical.

Identification and Evaluation of Insect and Disease Resistance in Transgenic Cry1Ab13-1 and NPR1 Maize

PCR detection, quantitative real-time PCR (q-RTPCR), outdoor insect resistance, and disease resistance identification were carried out for the detection of genetic stability and disease resistance through generations (T2, T3, and T4) in transgenic maize germplasms (S3002 and 349) containing the bivalent genes (insect resistance gene Cry1Ab13-1 and disease resistance gene NPR1) and their corresponding wild type. Results indicated that the target genes Cry1Ab13-1 and NPR1 were successfully transferred into both germplasms through tested generations; q-PCR confirmed the expression of Cry1Ab13-1 and NPR1 genes in roots, stems, and leaves of tested maize plants. In addition, S3002 and 349 bivalent gene-transformed lines exhibited resistance to large leaf spots and corn borer in the field evaluation compared to the wild type. Our study confirmed that Cry1Ab13-1 and NPR1 bivalent genes enhanced the resistance against maize borer and large leaf spot disease and can stably inherit. These findings could be exploited for improving other cultivated maize varieties.

Evaluating the vegetation–atmosphere coupling strength of ORCHIDEE land surface model (v7266)

Abstract. Plant transpiration dominates terrestrial latent heat fluxes (LE) and plays a central role in regulating the water cycle and land surface energy budget. However, Earth system models (ESMs) currently disagree strongly on the amount of transpiration, and thus LE, leading to large uncertainties in simulating future climate. Therefore, it is crucial to correctly represent the mechanisms controlling the transpiration in models. At the leaf scale, transpiration is controlled by stomatal regulation, and at the canopy scale, through turbulence, which is a function of canopy structure and wind. The coupling of vegetation to the atmosphere can be characterized by the coefficient Ω. A value of Ω→0 implies a strong coupling of vegetation and the atmosphere, leaving a dominant role to stomatal conductance in regulating water (H2O) and carbon dioxide (CO2) fluxes, while Ω→1 implies a complete decoupling of leaves from the atmosphere, i.e., the transfer of H2O and CO2 is limited by aerodynamic transport. In this study, we investigated how well the land surface model (LSM) Organising Carbon and Hydrology In Dynamic Ecosystems (ORCHIDEE) (v7266) simulates the coupling of vegetation to the atmosphere by using empirical daily estimates of Ω derived from flux measurements from 90 FLUXNET sites. Our results show that ORCHIDEE generally captures the Ω in forest vegetation types (0.27 ± 0.12) compared with observation (0.26 ± 0.09) but underestimates Ω in grasslands (GRA) and croplands (CRO) (0.25 ± 0.15 for model, 0.33 ± 0.17 for observation). The good model performance in forests is due to compensation of biases in surface conductance (Gs) and aerodynamic conductance (Ga). Calibration of key parameters controlling the dependence of the stomatal conductance to the water vapor deficit (VPD) improves the simulated Gs and Ω estimates in grasslands and croplands (0.28 ± 0.20). To assess the underlying controls of Ω, we applied random forest (RF) models to both simulated and observation-based Ω. We found that large observed Ω are associated with periods of low wind speed, high temperature and low VPD; it is also related to sites with large leaf area index (LAI) and/or short vegetation. The RF models applied to ORCHIDEE output generally agree with this pattern. However, we found that the ORCHIDEE underestimated the sensitivity of Ω to VPD when the VPD is high, overestimated the impact of the LAI on Ω, and did not correctly simulate the temperature dependence of Ω when temperature is high. Our results highlight the importance of observational constraints on simulating the vegetation–atmosphere coupling strength, which can help to improve predictive accuracy of water fluxes in Earth system models.