Large Vertebrates Research Articles

Long-term anthropogenic drivers of diet composition and niche breadth in an endangered avian scavenger: The scant role of sanitary regulations

The widespread and accelerated transformation experienced by our planet results in populations of endangered species having to survive in highly-altered environments and increasingly relying on resources provided by human subsidies. Presently, vultures rank among the most imperiled functional groups of large vertebrates globally, a situation that is largely attributed to the rapid intensification of agriculture and the subsequent transformation of farming practices and agro-grazing landscapes. Hence, documenting the long-term fluctuations in the vultures’ dietary patterns in response to environmental changes, particularly in livestock management, is of utmost significance. Here, by means of bulk stable isotope analysis (δ13C and δ15N), we examined long-term variations in diet composition and niche breadth in a population of the endangered Egyptian vulture (Neophron percnopterus) in the north of the Iberian Peninsula. We specifically focused on the effect of European sanitary regulations enacted in 2014, which allow sheep farmers to abandon livestock remains for consumption by scavenging birds, except for pig carcasses. We found that the implementation of these new regulations did not cause a change in the diet of vultures. Changes were only detected in scrubland areas and were driven by an increase in the consumption of wild rabbit which, in turn, lead to expansion of the trophic niche. These results indicate that these endangered vultures are heavily dependent on food sources derived from intensive farming, mostly of pigs illegally disposed in the wild, and moreover, highlight the importance of carcasses of small vertebrates, often disregarded in conservation programs in favor of the contribution of livestock remains. Our research provides valuable insights into the spatiotemporal dynamics of trophic strategies among avian scavengers, specifically in the context of changes resulting from intensified human-pressures on agro-grazing Mediterranean landscapes.

Prey size and ecological separation in spinosaurid theropods based on heterodonty and rostrum shape.

Members of the dinosaur clade Spinosauridae had numerous traits attributed to feeding in or around water, and their feeding apparatus has often been considered analogous to modern crocodylians. Here we quantify the craniodental morphology of Spinosauridae and compare it to modern Crocodylia. We measured from spinosaurid and crocodylian skeletal material the area of alveoli as a proxy for tooth size to determine size-heterodonty. Geometric morphometrics were also conducted on tooth crowns and tooth bearing regions of the skull. Spinosaurids overall had relatively large alveoli, and both they, and crocodylians, had isolated regions of enlarged alveoli. Spinosaurines also had enlarged alveoli along the caudal dentary that baryonychines lacked, which instead had numerous additional caudal tooth positions. Size-heterodonty was positively allometric, and spinosaurids overlapped with generalist/macro-generalist crocodylians of similar sizes. Spinosaurid crown shape morphologies overlapped with certain slender-longirostrine crocodylians, yet lacked molariform distal crowns typical of most crocodylians. Spinosaurid rostra and mandibles were relatively deep with undulating margins correlating with local tooth sizes, which may indicate a developmental constraint. Spinosaurines had a particularly long concavity caudal to their rosette of anterior cranial teeth, with a corresponding bulbous rostral dentary. The spinosaurid feeding apparatus was well suited for quickly striking and creating deep punctures, but not cutting flesh or durophagy. The jaws interlocked to secure prey and move it deeper into the mouth. The baryonychines probably did little oral processing, yet spinosaurines could have processed relatively large vertebrates. Overall, there is no indication that spinosaurids were restricted to fish or small aquatic prey.

Phylogenomics and pervasive genome-wide phylogenetic discordance among fin whales (Balaenoptera physalus).

Phylogenomics has the power to uncover complex phylogenetic scenarios across the genome. In most cases, no single topology is reflected across the entire genome as the phylogenetic signal differs among genomic regions due to processes, such as introgression and incomplete lineage sorting. Baleen whales are among the largest vertebrates on Earth with a high dispersal potential in a relatively unrestricted habitat, the oceans. The fin whale (Balaenoptera physalus) is one of the most enigmatic baleen whale species, currently divided into four subspecies. It has been a matter of debate whether phylogeographic patterns explain taxonomic variation in fin whales. Here we present a chromosome-level whole genome analysis of the phylogenetic relationships among fin whales from multiple ocean basins. First, we estimated concatenated and consensus phylogenies for both the mitochondrial and nuclear genomes. The consensus phylogenies based upon the autosomal genome uncovered monophyletic clades associated with each ocean basin, aligning with the current understanding of subspecies division. Nevertheless, discordances were detected in the phylogenies based on the Y chromosome, mitochondrial genome, autosomal genome and X chromosome. Furthermore, we detected signs of introgression and pervasive phylogenetic discordance across the autosomal genome. This complex phylogenetic scenario could be explained by a puzzle of introgressive events, not yet documented in fin whales. Similarly, incomplete lineage sorting and low phylogenetic signal could lead to such phylogenetic discordances. Our study reinforces the pitfalls of relying on concatenated or single locus phylogenies to determine taxonomic relationships below the species level by illustrating the underlying nuances which some phylogenetic approaches may fail to capture. We emphasize the significance of accurate taxonomic delineation in fin whales by exploring crucial information revealed through genome-wide assessments.

Recovering connectivity through restoration corridors in a fragmented landscape in the magdalena river’s valley in Colombia

Forest fragmentation is one of the main drivers of global biodiversity loss leading to the isolation of wildlife populations. This study focuses on understanding the role of restoration corridors as a strategy promoting resilience and viability of mammal and bird populations in a fragmented landscape in Colombia. We installed 98 camera-trap stations − 8497 camera-trap days - in four different land cover categories: (1) forest fragments, (2) natural corridors, (3) stablished corridors and (4) pastures. We evaluated if restoration corridors do promote connectivity for large vertebrates and recover species richness and functional diversity lost in anthropogenically transformed pastures. We used indices of taxonomic and functional diversity and a non-metric multidimensional scaling to evaluate the influence of land cover over mammal and bird communities. Both, species richness and functional diversity have higher values in forests, followed by natural corridors and corridors and lower values in open pastures. Differences in species composition were greater between forests and pastures, and species composition of restoration corridors begins to resemble that of riparian forests and forest fragments. Our results provide initial evidence on the role of restoration corridors as an efficient strategy aimed to recover biodiversity and functional diversity in pervasively fragmented landscapes.

Planning for the future: Grasslands, herbivores, and nature‐based solutions

Abstract Global interest and investment in nature‐based solutions (NbS) are rapidly increasing because of the potential of this approach to concurrently counter biodiversity loss, provide cost‐effective measures for climate change adaptations, and maintain natural processes that underpin human health and wellbeing. Recognition is growing that grasslands in many regions will protect carbon stores more effectively than forests in the warmer, drier, more fire‐prone conditions of the future while also serving as hotspots for biodiversity. Yet grasslands have received less attention for their NbS potential. Despite the wide‐ranging goals of this approach, many investments in nature‐based solutions also have focused narrowly on using plants to meet climate pledges, often without considering plant interactions with herbivores and the abiotic environment that jointly control ecosystem functioning and underpin the success of nature‐based solutions. Here, we review the roles that large and small vertebrate and invertebrate herbivores play in the ability of the world's grasslands to provide nature‐based solutions, with a focus on wild herbivore impacts on biodiversity and carbon storage. Synthesis. Planning for nature‐based solutions with a holistic, ecologically informed view that includes the role of herbivores and their interaction with plants and the environment will allow NbS investments to more likely achieve successful, sustainable outcomes.

Megafauna Fossils in Iran's Quaternary Period: An Overview

The Quaternary is marked by numerous climatic fluctuations, including glacial and interglacial periods. Interglacial periods were characterized by warmer and wetter conditions, and are associated with a unique group of large vertebrate animals, or mammals. Fossil remains of these large mammalian vertebrates, such as elephants, rhinoceroses, horses, deer, and boars, are commonly found in Quaternary sediments. One reason for the abundance of Quaternary vertebrate fossils compared to those from other geological epochs is the relatively young age of Quaternary deposits. Additionally, the size of these creatures' skeletal remains and their higher preservation potential in high-energy environments contribute to their prevalence in the fossil record. In recent years, the study of Quaternary paleontology in Iran has gained significant momentum, with numerous research projects focusing on the animal remains of ancient caves throughout the country. This review aims to summarize and introduce the most significant discoveries in this vital field by examining the regions with substantial Quaternary mammalian vertebrates in Iran. Notable areas include Lorestan, Moghan Plain, Ravansar inKermanshah, Natanz, Isfahan, Qaleh Joq, Torbat Heydarieh, Zaviya Saveh, Shahreza, Isfahan, Qazvin, and Haft Tepeh of Khuzestan. The primary fossils of these regions' large animals, such as elephants, geckos, and horses, have been discussed.

Morphological disparity and structural performance of the dromaeosaurid skull informs ecology and evolutionary history

Non-avialan theropod dinosaurs had diverse ecologies and varied skull morphologies. Previous studies of theropod cranial morphology mostly focused on higher-level taxa or characteristics associated with herbivory. To better understand morphological disparity and function within carnivorous theropod families, here we focus on the Dromaeosauridae, ‘raptors’ traditionally seen as agile carnivorous hunters.We applied 2D geometric morphometrics to quantify skull shape, performed mechanical advantage analysis to assess the efficiency of bite force transfer, and performed finite element analysis to examine strain distribution in the skull during biting. We find that dromaeosaurid skull morphology was less disparate than most non-avialan theropod groups. Their skulls show a continuum of form between those that are tall and short and those that are flat and long. We hypothesise that this narrower morphological disparity indicates developmental constraint on skull shape, as observed in some mammalian families. Mechanical advantage indicates that Dromaeosaurus albertensis and Deinonychus antirrhopus were adapted for relatively high bite forces, while Halszkaraptor escuilliei was adapted for high bite speed, and other dromaeosaurids for intermediate bite forces and speeds. Finite element analysis indicates regions of high strain are consistent within dromaeosaurid families but differ between them. Average strain levels do not follow any phylogenetic pattern, possibly due to ecological convergence between distantly-related taxa.Combining our new morphofunctional data with a re-evaluation of previous evidence, we find piscivorous reconstructions of Halszkaraptor escuilliei to be unlikely, and instead suggest an invertivorous diet and possible adaptations for feeding in murky water or other low-visibility conditions. We support Deinonychus antirrhopus as being adapted for taking large vertebrate prey, but we find that its skull is relatively less resistant to bite forces than other dromaeosaurids. Given the recovery of high bite force resistance for Velociraptor mongoliensis, which is believed to have regularly engaged in scavenging behaviour, we suggest that higher bite force resistance in a dromaeosaurid taxon may reflect a greater reliance on scavenging rather than fresh kills.Comparisons to the troodontid Gobivenator mongoliensis suggest that a gracile rostrum like that of Velociraptor mongoliensis is ancestral to their closest common ancestor (Deinonychosauria) and the robust rostra of Dromaeosaurus albertensis and Deinonychus antirrhopus are a derived condition. Gobivenator mongoliensis also displays a higher jaw mechanical advantage and lower resistance to bite force than the examined dromaeosaurids, but given the hypothesised ecological divergence of troodontids from dromaeosaurids it is unclear which group, if either, represents the ancestral condition. Future work extending sampling to troodontids would therefore be invaluable and provide much needed context to the origin of skull form and function in early birds. This study illustrates how skull shape and functional metrics can discern non-avialan theropod ecology at lower taxonomic levels and identify variants of carnivorous feeding.

Development of single-pin, un-barbed, pole-tagging of free-swimming dolphins and sharks with satellite-linked transmitters

BackgroundTo tag large marine vertebrates, without the need to catch them, avoiding using barbs for tag retention, and precisely controlling tag location, the remote Tag Attachment Device on a pole (TADpole) was developed. This allows single-pin tags (Finmount, Wildlife Computers) to be attached to the dorsal fins of free-swimming large marine vertebrates.ResultsTADpole comprises a pole-mounted holster that carries a tag. It uses compressed air, and a micro-controller, to rapidly insert a stainless-steel pin through a corrodible metal retaining ring in the first tag attachment wing, the animal’s dorsal fin, and then a press fit Delrin retaining ring in the tag wing on the other side of the fin. Tagging only occurs when the trailing edge of the dorsal fin touches a trigger bar in the holster, ensuring optimal pin placement. It was developed using fins from cadavers, then trialed on briefly restrained coastal dolphins that could be followed in successive days and weeks, and then on free-swimming animals in the field. The latter showed very short touch/response intervals and highlighted the need for several iterative revisions of the pneumatic system. This resulted in reducing the total time from triggering to tag application to ~ 20 ms. Subsequent efforts expanded the TADpole’s applicability to sharks. One free-swimming Atlantic spotted dolphin, two white sharks, and one whale shark were then tagged using the TADpole.ConclusionsBeing able to tag free-swimming dolphins and sharks remotely and precisely with satellite-linked telemetry devices may contribute to solving conservation challenges. Sharks were easier to tag than dolphins. Dolphin touch-to-response times were 28 ms or less. Delphinid skin has unique polymodal axon bundles that project into the epidermis, perhaps a factor in their uniquely fast response, which is 10 × faster than humans. Their primary reaction to tagging is to abduct the flippers and roll the fin out of the TADpole holster. This device has the potential to deliver high-quality tag data from large vertebrates with dorsal fins without the stress and logistics associated with catch-and-release, and without the trauma of tags that use barbs for retention. It also collects a dorsal fin biopsy core.

Ungulate herbivores promote contrasting modifications of soil properties and organic carbon stabilization in a grazed grassland versus rewilded woodland environment

Large vertebrate herbivores are ecosystem engineers, provoking cascading effects on soil properties through modifications of plant communities as well as direct modulation of organic matter incorporated into soils. However, most studies have been carried out with domestic ungulates in grasslands, and the effects which predominate in grasslands may not be generalizable to other ecosystems. It is not well understood how trophic rewilding with wild ungulates may affect soil processes, especially in non-grassland systems albeit rewilding of natural areas is a process associated with larger trends of land abandonment, shrub encroachment or land use change. In this study we investigated ungulate herbivore exclusion in two geographically and pedo-climatically equivalent but ecologically distinct contexts: a Mediterranean grassland with domesticated herbivores, and a reforested area populated by a community of wild ungulates. In each context, long-term herbivore exclusion zones were used to understand the effect of herbivores on soil properties and particularly on soil organic carbon (SOC). Samples from the topsoil (0–5 cm) were taken inside and outside the exclosures distributed between the two contexts, and ecosystem-level effects and responses to grazing were investigated. We found that soil properties’ response to grazing depended on the ecological context in which the grazing occurred. SOC contents in the grassland increased by up to 37% with grazing, while grazing reduced SOC concentrations by 23% in the rewilded area. In both cases, grazing was also associated with significant alterations of soil microbial biomass, the microbial metabolic quotient (qCO2), and aggregate stability, but the effects were opposite: On one hand, domesticated herbivores in the grassland positively influenced carbon stabilization which was strongly associated with soil microbial processes and characteristics, and additionally the proportion of stable macroaggregates was increased. In contrast, wild ungulate herbivory in the forest ecosystem reduced SOC concentrations, accompanied by decreased microbial biomass and increased microbial maintenance costs, and stable macroaggregates were reduced. The results indicate the importance of ecological context in determining the effect of herbivores on soil properties and processes and suggest that the directionality of effects on SOC may change owing to the predominance of different mechanisms of SOC stabilization. Consequently, this study provides evidence that the management of ungulates in rangelands or forests can be associated with different outcomes as related to crucial soil properties such as SOC contents and aggregation.

Competition, cooperation, and parental effects in larval aggregations formed on carrion by communally breeding beetles Necrodes littoralis (Staphylinidae: Silphinae).

Aggregations of juveniles are dominant forms of social life in some insect groups. Larval societies are shaped by competitive and cooperative interactions of the larvae, in parallel with parental effects. Colonies of necrophagous larvae are excellent systems to study these relationships. Necrodes littoralis (Staphylinidae: Silphinae), a carrion beetle that colonizes cadavers of large vertebrates, forms massive juvenile aggregations. By spreading over carrion anal and oral exudates, the beetles form the feeding matrix, in which the heat is produced and by which adults presumably affect the fitness of the larvae. We predict that exploitative competition shapes the behavior of N. littoralis larvae in their aggregations. However, cooperative interactions may also operate in these systems due mainly to the benefits of collective exodigestion. Moreover, indirect parental effects (i.e., formation of the feeding matrix) probably modulate larval interactions within the aggregations. By manipulating parental effects (present/absent) and larval density (0.02-1.9 larvae/g of meat), we found a strong negative group-size effect on fitness components of N. littoralis, in colonies with parental effects over almost the entire density range, and in colonies without parental effects for densities larger than 0.5 larva/g. This was accompanied by positive group-size effects in terms of development time (it shortened with larval density) and thermogenesis (it increased with larval density). A pronounced positive group-size effect on juvenile fitness was found only in colonies without parental effects and only in the low-density range. These results support the hypothesis that larval societies of N. littoralis are shaped by exploitation competition.

Using historical habitat loss to predict contemporary mammal extirpations in Neotropical forests.

Understanding which species will be extirpated in the aftermath of large-scale human disturbance is critical to mitigating biodiversity loss, particularly in hyperdiverse tropical biomes. Deforestation is the strongest driver of contemporary local extinctions in tropical forests but may occur at different tempos. The 2 most extensive tropical forest biomes in South America-the Atlantic Forest and the Amazon-have experienced historically divergent pathways of habitat loss and biodiversity decay, providing a unique case study to investigate rates of local species persistence on a single continent. We quantified medium- to large-bodied mammal species persistence across these biomes to elucidate how landscape configuration affects their persistence and associated ecological functions. We collected occurrence data for 617 assemblages of medium- to large-bodied mammal species (>1kg) in the Atlantic Forest and the Amazon. Analyzing natural habitat cover based on satellite data (1985-2022), we employed descriptive statistics and generalized linear models (GLMs) to investigate ecospecies occurrence patterns in relation to habitat cover across the landscapes. The subregional erosion of Amazonian mammal assemblage diversity since the 1970s mirrors that observed since the colonial conquest of the Atlantic Forest, given that 52.8% of all Amazonian mammals are now on a similar trajectory. Four out of 5 large mammals in the Atlantic Forest were prone to extirpation, whereas 53% of Amazonian mammals were vulnerable to extirpation. Greater natural habitat cover increased the persistence likelihood of ecospecies in both biomes. These trends reflected a median local species loss 63.9% higher in the Atlantic Forest than in the Amazon, which appears to be moving toward a turning point of forest habitat loss and degradation. The contrasting trajectories of species persistence in the Amazon and Atlantic Forest domains underscore the importance of considering historical habitat loss pathways and regional biodiversity erosion in conservation strategies. By focusing on landscape configuration and identifying essential ecological functions associated with large vertebrate species, conservation planning and management practices can be better informed.

Downsizing a heavyweight: factors and methods that revise weight estimates of the giant fossil whale Perucetus colossus.

Extremes in organismal size have broad interest in ecology and evolution because organismal size dictates many traits of an organism's biology. There is particular fascination with identifying upper size extremes in the largest vertebrates, given the challenges and difficulties of measuring extant and extinct candidates for the largest animal of all time, such as whales, terrestrial non-avian dinosaurs, and extinct marine reptiles. The discovery of Perucetus colossus, a giant basilosaurid whale from the Eocene of Peru, challenged many assumptions about organismal extremes based on reconstructions of its body weight that exceeded reported values for blue whales (Balaenoptera musculus). Here we present an examination of a series of factors and methodological approaches to assess reconstructing body weight in Perucetus, including: data sources from large extant cetaceans; fitting published body mass estimates to body outlines; testing the assumption of isometry between skeletal and body masses, even with extrapolation; examining the role of pachyostosis in body mass reconstructions; addressing method-dependent error rates; and comparing Perucetus with known physiological and ecological limits for living whales, and Eocene oceanic productivity. We conclude that Perucetus did not exceed the body mass of today's blue whales. Depending on assumptions and methods, we estimate that Perucetus weighed 60-70 tons assuming a length 17 m. We calculated larger estimates potentially as much as 98-114 tons at 20 m in length, which is far less than the direct records of blue whale weights, or the 270 ton estimates that we calculated for body weights of the largest blue whales measured by length.

From death comes life: Large vertebrate carrion enhances seedling establishment in clonal ericaceous shrubs

Abstract Carrion can have disproportionally large effects on ecological processes and community dynamics. During decomposition, the influx of growth‐limiting nutrients can create small‐scale disturbances with high soil cover known as ‘cadaver decomposition islands’ (CDIs). Such disturbances can allow for altered plant species composition, increased biomass production or provide microsites for regeneration. Carcasses also provide a resource for omnivorous scavengers, which have the potential to direct endozoochorous seed dispersal towards developing CDIs. In this study, we investigated functional links between the scavenger community, carcass‐induced disturbances in vegetation and the seedling establishment of berry‐producing ericaceous species. We experimentally placed out 30 vertebrate carcasses of various species in a boreal forest ecosystem, each paired with a control and a mechanically disturbed plot to track vertebrate animal activity (i.e. dispersal vectors), vegetation changes (i.e. recruitment windows) and seedling establishment. We hypothesized that carcass size and season of experimental deposition would affect (H1) scavenger community composition and (H2) formation of CDIs, and that (H3) seedling establishment of ericaceous species is more abundant at CDIs compared with control or disturbed plots without carcass deposition. We found that carcass presence effectively created a spatiotemporal hotspot of animal activity and that 94% of observations of vertebrates at carcasses were of species with the potential for ericaceous seed dispersal. Larger carcasses (e.g. moose, reindeer) attracted similar and abundant vertebrate communities, whereas observations at small carcasses (e.g. red fox) resembled those at control plots (H1). Only larger carcasses led to CDI formation (i.e. potential recruitment microsites), while plots with small carcasses resembled control plots (H2). Surprisingly, the season of carcass deposition did not influence vertebrate composition at carcass plots or CDI formation (H1–2). Seedlings were significantly more abundant in CDIs compared with mechanical disturbance and control plots (H3). Overall, CDIs contained about 4 and 19 times more seedlings compared with disturbed and controls, respectively. Our study demonstrates how individual carcasses in a boreal forest landscape can facilitate sexual reproduction in ericaceous keystone species. We suggest that this pathway also occurs in other ecosystems and that it may contribute to the genetic diversity of plant populations. Read the free Plain Language Summary for this article on the Journal blog.

Community-based monitoring reveals low anthropogenic pressure on a game vertebrate population in a sustainable-use Amazonian protected area

SummaryBiodiversity systematic monitoring programmes have been expanding across the globe, especially in protected areas (PAs). Amongst sustainable-use PAs, medium- to large-sized mammals and birds comprise crucial groups to monitor, given their importance to forest functionality and subsistence for local residents. Here, we used 6 years of community-based monitoring data from a sustainable-use PA in the Brazilian Amazonia (Tapajós–Arapiuns Extractive Reserve) to examine the influence of anthropogenic stressors and time on the density and biomass of forest mammal and bird game species. We further assessed trends in population density of target groups over the period. A total of 1915 km of line-transect surveys were completed by trained local monitors along eight established transects, providing data from 12 medium-sized and five large-sized game genera. Generalized linear mixed models of all medium-sized species, all large species and four individual taxa (Tinamidae, Dasyproctidae, primates and Cervidae) showed that some species (e.g., Dasyprocta croconota) exhibited great density, whereas others (e.g., Tapirus terrestris and Tayassu pecari) were rarely detected. Anthropogenic variables did not affect the density and biomass of the overall medium-sized and large vertebrates. Dasyproctidae, Tinamidae and primates were the only taxa influenced by anthropogenic stressors, with negative influence occurring only for Tinamidae. Moreover, density of groups and taxa remained stable throughout the period in the Reserve, although the frequency of some species may indicate past population losses. Continuation of this monitoring programme is required to improve understanding of population fluctuations, but over the 6 years studied, game population density and biomass were not linked to anthropogenic stressors.

Review of Satellite Remote Sensing and Unoccupied Aircraft Systems for Counting Wildlife on Land

Although many medium-to-large terrestrial vertebrates are still counted by ground or aerial surveys, remote-sensing technologies and image analysis have developed rapidly in recent decades, offering improved accuracy and repeatability, lower costs, speed, expanded spatial coverage and increased potential for public involvement. This review provides an introduction for wildlife biologists and managers relatively new to the field on how to implement remote-sensing techniques (satellite and unoccupied aircraft systems) for counting large vertebrates on land, including marine predators that return to land to breed, haul out or roost, to encourage wider application of these technological solutions. We outline the entire process, including the selection of the most appropriate technology, indicative costs, procedures for image acquisition and processing, observer training and annotation, automation, and citizen science campaigns. The review considers both the potential and the challenges associated with different approaches to remote surveys of vertebrates and outlines promising avenues for future research and method development.

Ran-GTP assembles a specialized spindle structure for accurate chromosome segregation in medaka early embryos

Despite drastic cellular changes during cleavage, a mitotic spindle assembles in each blastomere to accurately segregate duplicated chromosomes. Mechanisms of mitotic spindle assembly have been extensively studied using small somatic cells. However, mechanisms of spindle assembly in large vertebrate embryos remain little understood. Here, we establish functional assay systems in medaka (Oryzias latipes) embryos by combining CRISPR knock-in with auxin-inducible degron technology. Live imaging reveals several unexpected features of microtubule organization and centrosome positioning that achieve rapid, accurate cleavage. Importantly, Ran-GTP assembles a dense microtubule network at the metaphase spindle center that is essential for chromosome segregation in early embryos. This unique spindle structure is remodeled into a typical short, somatic-like spindle after blastula stages, when Ran-GTP becomes dispensable for chromosome segregation. We propose that despite the presence of centrosomes, the chromosome-derived Ran-GTP pathway has essential roles in functional spindle assembly in large, rapidly dividing vertebrate early embryos, similar to acentrosomal spindle assembly in oocytes.

Island biogeography theory provides a plausible explanation for why larger vertebrates and taller humans have more diverse gut microbiomes.

Prior work has shown a positive scaling relationship between vertebrate body size, human height, and gut microbiome alpha diversity. This observation mirrors commonly observed species area relationships (SARs) in many other ecosystems. Here, we expand these observations to several large datasets, showing that this size-diversity scaling relationship is independent of relevant covariates, like diet, body mass index, age, sex, bowel movement frequency, antibiotic usage, and cardiometabolic health markers. Island biogeography theory (IBT), which predicts that larger islands tend to harbor greater species diversity through neutral demographic processes, provides a simple mechanism for positive SARs. Using a gut-adapted IBT model, we demonstrated that increasing the length of a flow-through ecosystem led to increased species diversity, closely matching our empirical observations. We delve into the possible clinical implications of these SARs in the American Gut cohort. Consistent with prior observations that lower alpha diversity is a risk factor for Clostridioides difficile infection (CDI), we found that individuals who reported a history of CDI were shorter than those who did not and that this relationship was mediated by alpha diversity. We observed that vegetable consumption had a much stronger association with CDI history, which was also partially mediated by alpha diversity. In summary, we find that the positive scaling observed between body size and gut alpha diversity can be plausibly explained by a gut-adapted IBT model, may be related to CDI risk, and vegetable intake appears to independently mitigate this risk, although additional work is needed to validate the potential disease risk implications.

The late-Quaternary megafauna extinctions: Patterns, causes, ecological consequences and implications for ecosystem management in the Anthropocene

Abstract Across the last ~50,000 years (the late Quaternary) terrestrial vertebrate faunas have experienced severe losses of large species (megafauna), with most extinctions occurring in the Late Pleistocene and Early to Middle Holocene. Debate on the causes has been ongoing for over 200 years, intensifying from the 1960s onward. Here, we outline criteria that any causal hypothesis needs to account for. Importantly, this extinction event is unique relative to other Cenozoic (the last 66 million years) extinctions in its strong size bias. For example, only 11 out of 57 species of megaherbivores (body mass ≥1,000 kg) survived to the present. In addition to mammalian megafauna, certain other groups also experienced substantial extinctions, mainly large non-mammalian vertebrates and smaller but megafauna-associated taxa. Further, extinction severity and dates varied among continents, but severely affected all biomes, from the Arctic to the tropics. We synthesise the evidence for and against climatic or modern human (Homo sapiens) causation, the only existing tenable hypotheses. Our review shows that there is little support for any major influence of climate, neither in global extinction patterns nor in fine-scale spatiotemporal and mechanistic evidence. Conversely, there is strong and increasing support for human pressures as the key driver of these extinctions, with emerging evidence for an initial onset linked to pre-sapiens hominins prior to the Late Pleistocene. Subsequently, we synthesize the evidence for ecosystem consequences of megafauna extinctions and discuss the implications for conservation and restoration. A broad range of evidence indicates that the megafauna extinctions have elicited profound changes to ecosystem structure and functioning. The late-Quaternary megafauna extinctions thereby represent an early, large-scale human-driven environmental transformation, constituting a progenitor of the Anthropocene, where humans are now a major player in planetary functioning. Finally, we conclude that megafauna restoration via trophic rewilding can be expected to have positive effects on biodiversity across varied Anthropocene settings.

Scavenging with invasive species.

Carrion acts as a hotspot of animal activity within many ecosystems globally, attracting scavengers that rely on this food source. However, many scavengers are invasive species whose impacts on scavenging food webs and ecosystem processes linked to decomposition are poorly understood. Here, we use Australia as a case study to review the extent of scavenging by invasive species that have colonised the continent since European settlement, identify the factors that influence their use of carcasses, and highlight the lesser-known ecological effects of invasive scavengers. From 44 published studies we identified six invasive species from 48 vertebrates and four main groups of arthropods (beetles, flies, ants and wasps) that scavenge. Invasive red foxes (Vulpes vulpes), domestic dogs (Canis familiaris), feral pigs (Sus scrofa), black rats (Rattus rattus) and feral cats (Felis catus) were ranked as highly common vertebrate scavengers. Invasive European wasps (Vespula germanica) are also common scavengers where they occur. We found that the diversity of native vertebrate scavengers is lower when the proportion of invasive scavengers is higher. We highlight that the presence of large (apex) native vertebrate scavengers can decrease rates of scavenging by invasive species, but that invasive scavengers can monopolise carcass resources, outcompete native scavengers, predate other species around carcass resources and even facilitate invasion meltdowns that affect other species and ecological processes including altered decomposition rates and nutrient cycling. Such effects are likely to be widespread where invasive scavengers occur and suggest a need to determine whether excessive or readily available carcass loads are facilitating or exacerbating the impacts of invasive species on ecosystems globally.

Amino acid‐specific nitrogen stable isotope analysis reveals the trophic behavior of Icelandic fin whales in winter and suggests variable feeding strategies

AbstractFin whales (Balaenoptera physalus) aggregate west of Iceland during summer, where they feed mostly on krill, but their winter distribution is poorly known. This study investigates the winter behavior of fin whales that summer off Iceland by analyzing amino acid‐specific nitrogen isotope ratios in the baleen plates. This technique is increasingly used in large marine vertebrates to discriminate between changes in trophic position and changes in isotopic baseline levels, while ruling out the effect of fasting on these patterns. Analyses were conducted on samples extracted from two baleen plate segments: one corresponding to winter, another to summer. The trophic position was higher and slightly more variable in winter (3.6 ± 0.7) than in summer (3.0 ± 0.4), which indicates that during winter fin whales tend to feed on fish and are more generalist in feeding habits. Interestingly, the δ15NPhe values were not lower in winter than in summer (winter: 5.2‰ ± 2.4‰; summer: 4.0‰ ± 2.1‰). This was unexpected because baseline δ15N values (e.g., zooplankton) tend to be lower at low latitudes, where fin whales are believed to spend the winter. Fin whales may remain in relatively high latitudes during winter or visit low‐latitude areas with locally higher than average δ15N values, such as upwelling areas.