Large-angle X-ray Scattering Research Articles

Liquid Structure of Room-Temperature Ionic Liquid, 1-Ethyl-3-methylimidazolium Bis-(trifluoromethanesulfonyl) Imide

The liquid structure of 1-ethyl-3-methylimidazolium bis-(trifluoromethanesulfonyl) imide (EMI(+)TFSI(-)) has been studied by means of large-angle X-ray scattering (LAXS), (1)H, (13)C, and (19)F NMR, and molecular dynamics (MD) simulations. LAXS measurements show that the ionic liquid is highly structured with intermolecular interactions at around 6, 9, and 15 A. The intermolecular interactions at around 6, 9, and 15 A are ascribed, on the basis of the MD simulation, to the nearest neighbor EMI(+)...TFSI(-) interaction, the EMI(+)...EMI(+) and TFSI(-)...TFSI(-) interactions, and the second neighbor EMI+...TFSI(-) interaction, respectively. The ionic liquid involves two conformers, C(1) (cis) and C(2) (trans), for TFSI(-), and two conformers, planar cis and nonplanar staggered, for EMI(+), and thus the system involves four types of the EMI(+)...TFSI(-) interactions in the liquid state by taking into account the conformers. However, the EMI(+)...TFSI(-) interaction is not largely different for all combinations of the conformers. The same applies alsoto the EMI(+)...EMI(+) and TFSI(-)...TFSI(-) interactions. It is suggested from the 13C NMR that the imidazolium C(2) proton of EMI(+) strongly interacts with the O atom of the -SO(2)(CF(3)) group of TFSI(-). The interaction is not ascribed to hydrogen-bonding, according to the MD simulation. It is shown that the liquid structure is significantly different from the layered crystal structure that involves only the nonplanar staggered EMI(+) and C(1) TFSI(-) conformers.

Liquid Structure and the Ion-Ion Interactions of Ethylammonium Nitrate Ionic Liquid Studied by Large Angle X-Ray Scattering and Molecular Dynamics Simulations

Room temperature ionic liquids (RTILs) are useful as new solvents or materials owing to their favorable properties such as negligible vapor pressure, non-flammability, and wide electrochemical window. For further development of new RTILs, it is indispensable to understand macroscopic properties as solvent and/or liquids of RTILs at a molecular or atomistic level. Here, liquid structure and the ion-ion interactions of room temperature ionic liquid ethylammonium nitrate (EAN) were studied by means of large angle X-ray scattering (LAXS) experiment and molecular dynamics simulations. X-ray interference function for EAN shows a small peak of 0.62 A–1 indicating nano-scale segregation in the ionic liquid. X-ray radial distribution function as the form of D(r) – 4πr2ρ0 evidently shows a peak of 3.4 and broad ones of 4.7, 8 and 12 A, suggesting that EAN has long range ordering in the liquid state. The intra-molecular X-ray interference function was estimated on the basis of molecular geometries found in crystals to yield the inter-molecular X-ray pair correlation functionG_mathrm{inter}mathrm{LAXS}(r). In G_mathrm{inter}mathrm{LAXS}(r), peaks of 3.0, 3.4, and 4.7 A were found as the atom-atom correlation. The peak of 3.0 A can be assigned to the atom-atom correlation of N (C2H5NH3+)mO (NO3–) in the NHmO hydrogen bonding. In addition, the peak of 3.4 A is also ascribable to C (C2H5NH3+)mO (NO3–) correlations in the CHmO interactions. Molecular dynamics simulations based on newly developed force fields to describe a series of primary ammonium cation were performed to ascribe the peaks found in G_mathrm{inter}mathrm{LAXS}(r). The X-ray interference function imathrm{MD}(s) and the pair correlation function Gmathrm{MD}(r) derived from simulations were reasonably in agreement with the experimental ones. According to the partial atom-atom correlation functions derived from the simulations, the experimentally observed peaks of 3.0 and 3.4 A can be ascribable to the NHmO and the CHmO correlations in the closest ethylammonium and nitrate interaction, respectively. The CHmO interactions may play an important role in macroscopic properties of this kind of ionic liquids.

Structure of solvated mercury(ii) halides in liquid ammonia, triethyl phosphite and tri-n-butylphosphine solution

Liquid ammonia, trialkyl phosphites, and especially trialkylphosphines, are very powerful electron-pair donor solvents with soft bonding character. The solvent molecules act as strongly coordinating ligands towards mercury(ii), interacting strongly enough to displace halide ligands. In liquid ammonia mercury(ii) chloride solutions separate into two liquid phases; the upper contains tetraamminemercury(ii) complexes, [Hg(NH(3))(4)](2+), and chloride ions in low concentration, while the lower is a dense highly concentrated solution of [Hg(NH(3))(4)](2+) entities, ca. 1.4 mol dm(-3), probably ion-paired by hydrogen bonds to the chloride ions. Mercury(ii) bromide also dissociates to ionic complexes in liquid ammonia and forms a homogeneous solution for which (199)Hg NMR indicates weak bromide association with mercury(ii). When dissolving mercury(ii) iodide in liquid ammonia and triethyl phosphite solvated molecular complexes form in the solutions. The Raman nu(I-Hg-I) symmetric stretching frequency is 132 cm(-1) for the pseudo-tetrahedral [HgI(2)(NH(3))(2)] complex formed in liquid ammonia, corresponding to D(S) = 56 on the donor strength scale. For the Hg(ClO(4))(2)/NH(4)I system in liquid ammonia a (199)Hg NMR study showed [HgI(4)](2-) to be the dominating mercury(ii) complex for mole ratios n(I(-)) : n(Hg(2+)) > or = 6. A large angle X-ray scattering (LAXS) study of mercury(ii) iodide in triethyl phosphite solution showed a [HgI(2)(P(OC(4)H(9))(3))(2)] complex with the Hg-I and Hg-P bond distances 2.750(3) and 2.457(4) A, respectively, in near tetrahedral configuration. Trialkylphosphines generally form very strong bonds to mercury(ii), dissociating all mercury(ii) halides. Mercury(ii) chloride and bromide form solid solvated mercury(ii) halide salts when treated with tri-n-butylphosphine, because of the low permittivity of the solvent. A LAXS study of a melt of mercury(ii) iodide in tri-n-butylphosphine at 330 K resulted in the Hg-I and Hg-P distances 2.851(3) and 2.468(4) A, respectively. The absence of a distinct I-I distance indicates flexible coordination geometry with weak and non-directional mercury(ii) iodide association within the tri-n-butylphosphine solvated complex.

Liquid Structure of Acetic Acid−Water and Trifluoroacetic Acid−Water Mixtures Studied by Large-Angle X-ray Scattering and NMR

The structures of acetic acid (AA), trifluoroacetic acid (TFA), and their aqueous mixtures over the entire range of acid mole fraction xA have been investigated by using large-angle X-ray scattering (LAXS) and NMR techniques. The results from the LAXS experiments have shown that acetic acid molecules mainly form a chain structure via hydrogen bonding in the pure liquid. In acetic acid-water mixtures hydrogen bonds of acetic acid-water and water-water gradually increase with decreasing xA, while the chain structure of acetic acid molecules is moderately ruptured. Hydrogen bonds among water molecules are remarkably formed in acetic acid-water mixtures at xA<or=approximately 0.4, and water clusters eventually predominate in the mixtures at xA<or=approximately 0.18. The LAXS results have revealed that TFA molecules form not a chain structure but cyclic dimers through hydrogen bonding in the pure liquid. In TFA-water mixtures O...O hydrogen bonds among water molecules gradually increase when xA decreases, and hydrogen bonds among water molecules are significantly formed in the mixtures at xA<or=approximately 0.6. It has also been shown that TFA molecules are considerably dissociated to hydrogen ions and trifluoroacetate in the mixtures. 1H, 13C, and 19F NMR chemical shifts of acetic acid and TFA molecules for acetic acid-water and TFA-water mixtures have indicated strong relationships between a structural change of the mixtures and the acid mole fraction. On the basis of both LAXS and NMR results, the structural changes of acetic acid-water and TFA-water mixtures with decreasing acid mole fraction and the effects of fluorination of the methyl group on the structure are discussed at the molecular level.

Structure and Dynamics of Sulfate Ion in Aqueous SolutionAn ab initio QMCF MD Simulation and Large Angle X-ray Scattering Study

The hydrated sulfate ion has been characterized in aqueous solution in structural and dynamic aspects using ab initio quantum mechanical charge field (QMCF) molecular dynamics (MD) simulation and large angle X-ray scattering (LAXS) methods. The LAXS data show an average coordination number of the sulfate ion of up to 12 water molecules bound through hydrogen bonding, while the QMCF MD simulation displays a wide range of coordination numbers between 8 and 14 with an average value of approximately 11. The Os...Ow distance cannot be distinguished from the Ow...Ow distance in the LAXS experiment; the weighted mean O...O distance is 2.880(10) A. In the simulation, the Os...Ow and Ow...Ow distances are found to be very similar, namely, 2.86 and 2.84 A, respectively. The S-Os bond and S...Ow distance have been determined by the LAXS experiment as 1.495(6) and 3.61(2) A, respectively, indicating an average nearly tetrahedral S-Os...Ow angle. The approximately 5% deviations of simulation distances (1.47 and 3.82 A) from the experimental ones can probably be ascribed to the neglect of correlation energy in the quantum mechanical method. The mean residence time of water ligands at O atoms, 2.57 ps, is longer than that in pure water, 1.7 ps, characterizing the sulfate ion as a weak structure maker.

On the complex formation of iron(III) bromide in the space-demanding solvent N, N′-dimethylpropyleneurea and the structure of the trisbromoiron(III) complex in solution and crystalline state

The complex formation between iron(III) and bromide has been studied calorimetrically in N, N′-dimethylpropyleneurea (DMPU), and the structure of the DMPU solvated tribromoiron(III) complex has been studied in solution by extended X-ray absorption fine structure (EXAFS) and large angle X-ray scattering (LAXS), and in solid state by EXAFS and single crystal X-ray diffraction. The calorimetric study showed that iron(III) forms three medium strong bromide complexes in DMPU, and the thermodynamic pattern strongly indicates that all complexes are formed in entropy driven substitution reactions. In DMPU solution, the tribromoiron(III) complex has a regular trigonal planar configuration with a mean Fe–Br bond distance of 2.36 Å, and without any solvent molecules strongly bound to iron(III). In the solid state, however, the structure is a slightly distorted trigonal bipyramid, with one short and two slightly longer Fe–Br bonds, 2.37 and 2.44 Å, respectively, in a somewhat distorted trigonal plane, and two DMPU solvent molecules (mean Fe–O bond distance 1.98 Å) in the apical positions. The DMPU solution of iron(III) bromide and the [FeBr 3(dmpu) 2] crystals are both blackish red.

A Physical Picture of Atomic Motions within the Dickerson DNA Dodecamer in Solution Derived from Joint Ensemble Refinement against NMR and Large-Angle X-ray Scattering Data

The structure and dynamics of the Dickerson DNA dodecamer [5'd(CGCGAATTCGCG)2] in solution have been investigated by joint simulated annealing refinement against NMR and large-angle X-ray scattering data (extending from 0.25 to 3 A-1). The NMR data comprise an extensive set of hetero- and homonuclear residual dipolar coupling and 31P chemical shift anisotropy restraints in two alignment media, supplemented by NOE and 3J coupling data. The NMR and X-ray scattering data cannot be fully ascribed to a single structure representation, indicating the presence of anisotropic motions that impact the experimental observables in different ways. Refinement with ensemble sizes (Ne) of >or=2 to represent the atomic motions reconciles all the experimental data within measurement error. Cross validation against both the dipolar coupling and X-ray scattering data suggests that the optimal ensemble size required to account for the current data is 4. The resulting ensembles permit one to obtain a detailed view of the conformational space sampled by the dodecamer in solution and permit one to analyze fluctuations in helicoidal parameters, sugar puckers, and BI-BII backbone transitions and to obtain quantitative metrics of atomic motion such as generalized order parameters and thermal B factors. The calculated order parameters are in good agreement with experimental order parameters obtained from 13C relaxation measurements. Although DNA behaves as a relatively rigid rod with a persistence length of approximately 150 bp, dynamic conformational heterogeneity at the base pair level is functionally important since it readily permits optimization of intermolecular protein-DNA interactions.

A structural study of the N, N′-dimethylpropyleneurea solvated zinc(II) and cadmium(II) ions in solution and crystalline state

The structures of the N, N′-dimethylpropyleneurea (DMPU) solvated zinc(II) and cadmium(II) ions have been studied in solution by extended X-ray absorption fine structure (EXAFS) and large angle X-ray scattering (LAXS), and in solid state as the trifluoromethanesulfonate salts by EXAFS and crystallography. The DMPU solvated zinc(II) ion is four-coordinated in a tetrahedral fashion with a mean Zn–O bond distance of 1.925(6) Å in solid state, while the mean Zn–O bond distance is much longer in solution, 1.99(2) Å, suggesting that a five-coordinated solvate complex is dominating. As this Zn–O bond distance is somewhat shorter than expected for a five-coordinated zinc(II) complex the presence of a transient four-coordinated solvate complex in small amounts is possible. The DMPU solvated cadmium(II) ion is six-coordinated in an octahedral fashion in the solid state with a mean Cd–O bond distance of 2.260(9) Å. The crystal structure displays severe disorder of both the hexakis( N, N′-dimethylpropyleneurea)cadmium and trifluoromethanesulfonate ions. In this case, the mean Cd–O bond distance is slightly shorter in solution, 2.24(1) Å, which may indicate the existence of a transient dissociative five-coordinated species.

Coordination Chemistry of the Solvated Silver(I) Ion in the Oxygen Donor Solvents Water, Dimethyl Sulfoxide, and N,N‘-Dimethylpropyleneurea

The hydrated and dimethyl sulfoxide and N,N'-dimethylpropyleneurea solvated silver(I) ions have been characterized structurally in solution by means of extended X-ray absorption fine structure (EXAFS) and large-angle X-ray scattering (LAXS). The coordination chemistry of the hydrated and dimethyl sulfoxide solvated silver(I) ions has been reevaluated because of different results from the EXAFS and LAXS methods reported previously. Consistent results are obtained with a linearly distorted tetrahedral model with two short and approximately two long Ag-O bond distances: mean Ag-O bond lengths of 2.32(1) and 2.54(1) A for the hydrate, 2.31(1) and 2.48(2) A for the dimethyl sulfoxide solvate, and 2.31(1) and 2.54(2) A for the N,N'-dimethylpropyleneurea solvate, in solution.

Thermal Properties and Mixing State of Ethylene Glycol−Water Binary Solutions by Calorimetry, Large-Angle X-ray Scattering, and Small-Angle Neutron Scattering

Thermal properties and mixing states of ethylene glycol (EG)-water binary solutions in the entire mole fraction range of EG, 0 < or = x(EG) < or = 1, have been clarified by using differential scanning calorimetry (DSC), large-angle X-ray scattering (LAXS), and small-angle neutron scattering (SANS) techniques. The DSC curves obtained have shown that the EG-water solutions over the range of EG mole fraction 0.3 < or = x(EG) < or = 0.5 are kept in the supercooling state until approximately 100 K, and those in the range of 0.6 < or = x(EG) < or = 0.8 are vitrified, and those in the ranges of 0 < x(EG) < or = 0.2 and 0.9 < or = x(EG) < 1 are crystallized. The radial distribution function (RDF) for pure EG obtained from the LAXS measurements has suggested that a gauche conformation of an EG molecule is favorable in the liquid. The RDFs for the EG-water solutions have shown that the structure of the binary solutions moderately changes from the inherent structure of EG to the tetrahedral-like structure of water when the water content increases. The SANS intensities for deuterated ethylene glycol (HOCD2CD2OH) (EGd4)-water solutions at x(EG) = 0.4 and 0.6 have not been significantly observed in the temperature range from 298 to 173 K, showing that EG and water molecules are homogeneously mixed. On the other hand, the SANS intensities at x(EG) = 0.2 and 0.9 have been strengthened when the temperature decreases due to crystallization of the solutions. On the basis of all the present results, a relation between thermal properties of EG-water binary solutions and their mixing states clarified by the LAXS and SANS measurements has been discussed at the molecular level.

The hydration of the scandium(iii) ion in aqueous solution and crystalline hydrates studied by XAFS spectroscopy, large-angle X-ray scattering and crystallography

The structures of the hydrated scandium(III) ion and of the hydrated dimeric hydrolysis complex, [Sc2(mu-OH)2]4+, in acidic aqueous solutions have been characterized by X-ray absorption fine structure (XAFS) and large-angle X-ray scattering (LAXS) methods. Comparisons with crystalline reference compounds containing hydrated scandium(III) ions in well characterized six-, seven- and eight-coordinated polyhedra have been used to evaluate the coordination numbers and configurations in aqueous solution. In strongly acidic aqueous solution the structure of the hydrated scandium(III) ion is found to be similar to that of the eight-coordinated scandium(III) ion with distorted bicapped trigonal prismatic coordinating geometry in the crystalline [Sc(H2O)(8.0)](CF3SO3)3 compound. The EXAFS data reveal for the solution, as for the solid, a mean Sc-O bond distance of 2.17(1) Angstrom to six strongly bound prism water molecules, 2.32(4) Angstrom to one capping position, with possibly another capping position at about 2.5 Angstrom. The LAXS study supports this structural model and shows furthermore a second hydration sphere with approximately 12 water molecules at a mean Sc...O(II) distance of 4.27(3) Angstrom. In less acidic concentrated scandium(III) aqueous solutions, the dimeric hydrolysis product, [Sc2(mu-OH)2(H2O)10]4+, is the predominating species with seven-coordinated scandium(III) ions in a double hydroxo bridge and five terminal water molecules at a mean Sc-O bond distance of 2.145 Angstrom. Hexahydrated scandium(III) ions are found in the crystal structure of the double salt [Sc(H2O)6][Sc(CH3SO3)6], which crystallizes in the trigonal space group R3[combining macron] with Z = 6 and the unit cell dimensions a = 14.019(2) and c = 25.3805(5) Angstrom. The Sc-O distances in the two crystallographically unique, but nearly identical, [Sc(H2O)6]3+ entities (both with 3[combining macron] imposed crystallographic symmetry) are 2.085(6) and 2.086(5) Angstrom, while the mean Sc-O distance in the near octahedral [Sc(OSO2CH3)6]3- entities (with three-fold symmetry) is 2.078 Angstrom.

Crystal structure of lead(ii) acetylacetonate and the structure of the acetylacetone solvated lead(ii) ion in solution studied by large-angle X-ray scattering

The crystal structure of bis(acetylacetonato)lead(II) and the structure of the acetylacetone solvated lead(II) ion in solution have been determined by single-crystal X-ray diffraction and large-angle X-ray scattering (LAXS), respectively. The acetylacetone is deprotonated and acts as a bidentate anionic ligand (acac-) in the solid Pb(acac)2 compound. The lead(II) ion binds four oxygen atoms strongly in a nearly flat pyramidal configuration with Pb-O bond lengths in the range 2.32-2.37 A, and additionally three oxygens from neighboring complexes at 3.01-3.26 A. Acetylacetone acts as a solvent (Hacac) at dissolution of lead(II) trifluoromethanesulfonate forming a pentasolvate with a mean Pb-O bond distance of 2.724(5) A. The 6s2 lone electron pair on the lead(II) ion becomes stereochemically active in the crystalline acetylacetonate complex, while it is inactive in the solvate in solution. The solution was also analysed using IR and 1H NMR spectroscopy.

Structure and Dynamics of Halogenoethanol−Water Mixtures Studied by Large-Angle X-ray Scattering, Small-Angle Neutron Scattering, and NMR Relaxation

To clarify the structure of solvent clusters formed in halogenoethanol-water mixtures at the molecular level, large-angle X-ray scattering (LAXS) measurements have been made at 298 K on 2,2,2-trifluoroethanol (TFE), 2,2,2-trichloroethanol (TCE), and their aqueous mixtures in the TFE and TCE mole fraction ranges of 0.002 < or = x(TFE) < or = 0.9 and 0.5 < or = x(TCE) < or = 0.9, respectively. The radial distribution functions (RDFs) for TFE-water mixtures have shown that the structural transition from inherent TFE structure to the tetrahedral-like structure of water takes place at x(TFE) approximately 0.2. In the TCE-water mixtures inherent TCE structure remains in the range of 0.5 < or = x(TCE) < or = 1. Small-angle neutron scattering (SANS) experiments have been performed on CF(3)CH(2)OD- (TFE-d(1)-) D(2)O and CF(3)CD(2)OH- (TFE-d(2)-) H(2)O mixtures in the TFE mole fraction range of 0.05 < or = x(TFE) < or = 0.8. The SANS results in terms of the Ornstein-Zernike correlation length have revealed that TFE and water molecules are most heterogeneously mixed with each other in the TFE-water mixture at x(TFE) approximately 0.15, i.e., both TFE clusters and water clusters are most enhanced in the mixture. To evaluate the dynamics of TFE and ethanol (EtOH) molecules in TFE-water and ethanol-water mixtures, respectively, (1)H NMR relaxation rates for the methylene group within alcohol molecules have been measured by using an inversion-recovery method. The alcohol concentration dependence of the relaxation rates for the TFE-water and ethanol-water mixtures has shown a break point at x(TFE) approximately 0.15 and x(EtOH) approximately 0.2, respectively, where the structural transition from alcohol clusters to the tetrahedral-like structure of water takes place. On the basis of the present results, the most likely structure models of solvent clusters predominantly formed in TFE-water and TCE-water mixtures are proposed. In addition, effects of halogenation of the hydrophobic groups on clustering of alcohol molecules are discussed from the present results, together with the previous ones for ethanol-water and 1,1,1,3,3,3-hexafluoro-2-propanol- (HFIP-) water mixtures.

The structure of dimethylsulfoxide-solvated magnesium and calcium ions in solution and the solid state, and an overview of the coordination chemistry of hydrated and solvated alkaline earth metal ions

The structures of dimethylsulfoxide-solvated magnesium and calcium ions have been studied in the solid state and in dimethylsulfoxide solution by X-ray crystallography and large-angle X-ray scattering (LAXS), respectively. The magnesium and calcium ions coordinate six dimethylsulfoxide molecules in both the solid state and solution with mean Mg–O and Ca–O bond distances in solid perchlorate salts of 2.062(4) and 2.303(5) Å, respectively. A summary of the coordination chemistry of the hydrated and solvated alkaline earth metal ions shows that beryllium(II) and magnesium ions are tetrahedral and octahedral, respectively, in all solvents studied, while calcium and strontium are eight-coordinated in square antiprismatic fashion in water, but octahedral in dimethylsulfoxide and other organic solvents. Mean M–O bond distances of the hydrated alkaline earth metal ions were used to calculate the ionic radii of the alkaline earth metal ions.

Experimental Evidence for a Variable First Coordination Shell of the Cadmium(II) Ion in Aqueous, Dimethyl Sulfoxide, and N,N‘-Dimethylpropyleneurea Solution

A combined extended X-ray absorption fine structure (EXAFS) and large angle X-ray scattering (LAXS) investigation has been performed to evaluate the coordination structure of the cadmium(II) ion in aqueous, dimethyl sulfoxide, and N,N'-dimethylpropyleneurea (dmpu) solutions. This approach has singled out the existence of a flexible coordination shell around the cadmium(II) ion in aqueous and dimethyl sulfoxide solutions, whereas a regular octahedral complex is detected in dmpu. The EXAFS and LAXS techniques provide different values of the Cd-O first shell distance (2.27(1) A and 2.302(5) A, respectively) for the hydrated and dimethyl sulfoxide solvated complexes, and this discrepancy is originated by the simultaneous presence of hexa- and heptacoordinated complexes in solution, giving rise to a broad distribution of distances around the ion. These findings demonstrate that, in solution, the cadmium(II) ion forms quite flexible hydration and dimethyl sulfoxide solvate complexes undergoing a solvent exchange with unusually stable seven-coordinated intermediate complexes, and therefore the mean ion-solvent distance is longer in solution than in the solid state. In the dmpu solution, due to the bulkiness of the solvent molecules, the octahedral cadmium(II) solvate is extremely crowded and it is not possible for a seventh ligand to enter the inner-coordination shell. This investigation shows that the combined analysis of the EXAFS and LAXS data allows a reliable determination of the structural properties of electrolyte solutions, also in the presence of flexible coordination shell with a variable number of coordinating molecules.

Structure of Methanol Confined in MCM-41 Investigated by Large-Angle X-ray Scattering Technique

Large-angle X-ray scattering (LAXS) measurements over a temperature range from 223 to 298 K have been made on methanol confined in mesoporous silica MCM-41 with two different pore diameters, 28 A (C14) and 21 A (C10), under both monolayer and capillary-condensed adsorption conditions. To compare the structure of methanol in the MCM-41 pores with that of bulk methanol, X-ray scattering intensities for bulk methanol in the same temperature range have also been measured. The radial distribution functions (RDFs) for the monolayer methanol samples showed that methanol molecules are strongly hydrogen bonded to the silanol groups on the MCM-41 surface, resulting in no significant change in the structure of adsorbed methanol with respect to the pore size and temperature. On the other hand, the RDFs for the capillary-condensed methanol samples showed that hydrogen-bonded chains of methanol molecules are formed in both pores. However, the distance and number of hydrogen bonds estimated from the RDFs suggested that hydrogen bonds between methanol molecules in the pores are significantly distorted or partly disrupted. It has been found that the hydrogen bonds are more distorted in the smaller pores of MCM-41. With decreasing temperature, however, the hydrogen-bonded chains of methanol in the pores were gradually ordered. A comparison of the present results on methanol in MCM-41 pores with those on water in the same pores revealed that the structural change with temperature is less significant for confined methanol than for confined water.

Molecular dynamics (MD) simulations and large-angle X-ray scattering (LAXS) studies of the solid-state structure and assembly of isotactic (R)-poly(2,2'-dioxy-1,1'-binaphthyl-)phosphazene in the bulk state and in the cast film.

The intrachain conformation, molecular structure and interchain assembly of isotactic (R)-poly(2,2'-dioxy-1,1'-binaphthyl)phosphazene (P-DBNP) both in the bulk state (I) and in the cast film (II) were studied by molecular dynamics (MD) simulations of models, as implemented by a bias potential for the analysis of the radial distribution function (RDF) obtained from large-angle X-ray scattering (LAXS) data. The microscopic structure and order extension of the polymer changed from I to II, as qualitatively shown in the shapes of their experimentally measured RDF curves. With the use of a bias potential, the MD simulations provided a much more accurate analysis of the models, as seen in the reproduction of the RDFs. The chiral P-DBNP chain was found to be consistent with helix conformations in both the I and the II samples. The predominant interchain clustering motif was best reproduced with a seven-chain model. In the case of I, the maximum chain length was 18 monomeric -R(2)NP- units, while in the case of the cast film II the chain was more elongated, up to distances of approximately 100 A, equivalent to over 48 monomeric -R(2)NP- units. The seven-chain assembly was accounted for in terms of nonbonded interactions favouring the minimum voids area between the seven tubular structures of the material. The results validate our earlier finding that MD analysis with implementation of a biasing potential for the RDFs can provide quantitative information on the structural and conformational features of amorphous solids. The combined theoretical and experimental approach was found to be a useful tool to detect, locate and evaluate the intra- and intermolecular modifications of materials subsequent to their phase transformation and, as in the present case, changes in their microscopic structures or preparation methods.

On the solvation of the mercury(I) ion. A structural, vibration spectroscopic and quantum chemical study

The structure of the solvated mercury(I) ion in solvents such as water, methanol, dimethylsulfoxide, N, N ′-dimethylpropyleneurea, acetonitrile and pyridine solution has been studied by means of EXAFS and/or large angle X-ray scattering (LAXS). Raman spectroscopy has been used for the determination of the Hg–Hg stretching frequencies. The Hg–Hg bond length increases with increasing solvating ability of the solvent, while the stretching frequency appears to be almost invariant. The results of quantum chemical calculations indicate a significant influence on the Hg–Hg bond from solvation. The structure of solid anhydrous mercury(I) trifluoromethanesulfonate, Hg 2(CF 3SO 3) 2 ( 1), has been determined by powder diffraction methods. The structure comprises of discrete molecules, where each mercury binds to an oxygen atom in the anion, forming an almost linear O–Hg–Hg–O entity; the Hg–Hg–O angle is 173° and the Hg–Hg and Hg–O bond lengths are 2.486(6) and 2.099(22) Å, respectively.

Structure of 1-Propanol–Water Mixtures Investigated by Large-Angle X-ray Scattering Technique

Large-angle X-ray Scattering (LAXS) experiments at 298 K have been made on 1-propanol–water mixtures over the whole 1-propanol mole fraction range. The radial distribution functions show that the predominant clusters in 1-propanol–water mixtures change at 1-propanol mole fraction x 1pr = 0.1; the tetrahedral-like structure of water is mainly formed in the mixtures with x 1pr≤ 0.1, while hydrogen-bonded chain clusters of 1-propanol molecules predominate in the mixtures at x 1pr > 0.1. From the present results, together with the previous ones on methanol–water, ethanol–water, and 2-propanol–water mixtures, size and shape effects of the hydrophobic groups on the structure of aliphatic alcohol–water mixtures are discussed at the molecular level. The anomalies of the enthalpies of mixing for 1-propanol–water mixtures at 298 K are interpreted on the basis of the proposed change in structure of the mixtures with 1-propanol mole fraction.

Structure of the hydrated and dimethyl sulfoxide solvated rubidium ions in solution.

The structure of the hydrated and the dimethyl sulfoxide solvated rubidium ions in solution has been determined by means of large-angle X-ray scattering (LAXS) and extended X-ray absorption fine structure (EXAFS) studies. The models of the hydrated and dimethyl sulfoxide solvated rubidium ions fitting the experimental data best are square antiprisms with Rb-O bond distances of 2.98(2) and 2.98(3) A, respectively. The EXAFS data show a significant asymmetry in the Rb-O bond distance distribution with C(3) values of 0.0076 and 0.015 A(3), respectively. No second hydration sphere is observed around the hydrated rubidium ion. The dimethyl sulfoxide solvated rubidium ion displays a Rb-O-S bond angle of ca. 130 degrees, which is typical for a medium hard electron acceptor such as rubidium.