Foreland basins are shaped by the sedimentary architecture and lithospheric flexure due to the sediment load, slab pull, orogenic growth, and asthenospheric mantle flow. However, it is challenging to differentiate foreland basins from rift basins due to the destructive effects of multiphase orogenesis. Situated at the core of the western Central Asian Orogen Belt, the Junggar Basin holds vital clues regarding the closure of the Paleo-Asian Ocean. There is debate regarding whether it was a compressional foreland basin or an extended rift after the closure of the surrounding oceans. Furthermore, uncertainties persist regarding the fate of the residual oceanic crust and the precise tectonic processes during the collision of the ocean-arc-continent system. Understanding the basin's style during the early Permian period is crucial for deciphering its dynamic tectonic history. This study leverages regional seismic data to reevaluate the overall structure of the Junggar Basin, providing insights into its tectonic context and the mechanisms of intraplate deformation during the early Permian period. The findings reveal significant early Permian deformation features characterized by varying strata thicknesses and unconformities, signifying continuous tectonic activity during deposition. The western and southern depressions that developed from the late Carboniferous to early Permian are in keeping with compressional dynamics and reflect a foredeep basin, while the central uplift corresponds to a forebulge. This study posits that the observed foreland basin system was shaped by lithospheric flexure at the end of the late Carboniferous and lithospheric buckling in the early Permian, which contributed to the creation of uplifted Mosuowan-Baijiahai forebulge in the interior. The Junggar Basin featured a convergent dynamic environment, although the surrounding orogen transitioned into a postcollisional orogen in the Central Asian Orogenic Belt during the early Permian.