Prolonged mechanical ventilation (MV; ≥6h) results in large, time-dependent reductions in diaphragmatic blood flow and shear stress. We tested the hypothesis that MV would impair the structural and material properties (ie, increased stress/stretch relation and/or circumferential stretch) of first-order arterioles (1A) from the medial costal diaphragm. Shear stress was estimated from isolated arterioles and prior blood flow data from the diaphragm during spontaneous breathing (SB) and prolonged MV (6h MV). Thereafter, female Sprague-Dawley rats (~5months) were randomly divided into two groups, SB (n=6) and 6h MV (n=6). Following SB and 6h MV, 1A medial costal diaphragm arterioles were isolated, cannulated, and subjected to stepwise (0-140cmH2 O) increases in intraluminal pressure in calcium-free Ringer's solution. Inner diameter and wall thickness were measured at each pressure step and used to calculate wall:lumen ratio, Cauchy-stress, and circumferential stretch. Compared to SB, there was a ~90% reduction in arteriolar shear stress with prolonged MV (9±2 vs 78±20dynes/cm2 ; p≤.05). In the unloaded condition (0cmH2 O), the arteriolar intraluminal diameter was reduced (37±8 vs 79±13μm) and wall:lumen ratio was increased (120±18 vs 46±10%) compared to SB (p≤.05). There were no differences in the passive diameter responses or the circumferential stress/stretch relationship between groups (p>.05), but at each pressure step, circumferential stretch was increased with 6h MV vs SB (p≤.05). During prolonged MV, medial costal diaphragm arteriolar shear stress is severely diminished. Despite no change in the material behavior (stress/stretch), prolonged MV resulted in altered structural and mechanical properties (ie, elevated circumferential stretch) of medial costal diaphragm arterioles. This provides important novel mechanistic insights into the impaired diaphragm blood flow capacity and vascular dysfunction following prolonged MV.