Water contamination by pesticides threatens clean water availability, highlighting the need for advanced sustainable sanitation systems. Adsorption using biopolymers and minerals is prominent. Understanding process kinetics and influencing parameters is crucial for optimizing contaminant-adsorbent contact time for safe water disposal. The adsorption kinetics of Paraquat (PQ) at three initial concentrations (C0 = 19, 38, and 50 ppm) were studied using alginate-montmorillonite (Alg-Mt) beads with varying clay contents and a 30-min gelation time. The beads were characterized by elemental analysis, TG/DTG, FTIR, XRD, SEM, and EDX. The Shrinking Core Model (SCM) was applied to the experimental data to determine if the diffusion of PQ within the beads depended on clay content. The effective diffusion coefficient (Dp) in the adsorbent increased from 7 × 10−12 to 1 × 10−10 m2 s−1 with increasing clay content, suggesting that diffusion into the interior depended on interaction with the mineral.This investigation also demonstrated that the synthesis of beads at different gelation times does not impact either the adsorption capacity or the adsorption rate of the herbicide on the materials. These results indicate that diffusion depends solely on the interaction of the cationic herbicide with the clay encapsulated within the bead hydrogel.