Students’ learning outcomes in scientific education are still horrifyingly poor as of right now. Numerous scientific students, ranging from elementary school to university education, exhibit insufficient cognitive, attitudinal, and psychomotor skills in their science education. The didactic, traditional, conventional, and non-heuristic instructional pattern used in scientific teaching and learning is to blame for the horrifying learning outcomes in science education. Studies have shown that using technology to educate and understand science has favorable effects. Technology-assisted science instruction and reflective thinking are advised by the National Science Teachers Association (NSTA, 2012, 2015, 2020). The Learning Management System (LMS) is a reliable technological tool that controls learning effectiveness in all subject areas, including science education. With Immediate Knowledge of Results (IKOR), the Learning Management System (LMS) provides a thorough, heuristic, predictive, and stimulating instructional capability to direct and lead the students in a hands-on, mind-on manner. Instructional System Design (ISD) in science education improves, permits, enriches, and empowers science instruction and learning. Insufficient technological expertise, inadequate infrastructure, resistance to change, lack of real-world experience, poor content quality, low digital literacy, and numerous other constraining issues call for investing in the institution’s IT infrastructure, address issues of access and equity; teach educators and students digital literacy; foster community and collaboration; and provide professional development to improve scientific education using learning management systems for enhanced learning outcomes.