Abstract Ground subsidence is a critical problem in populated areas, which requires attention and routine monitoring. Specifically, subsidence related to the exploitation of aquifer systems is of particular interest in terms of risk for the possible damage to buildings and availability of water resources. We propose to realise a survey of the aquifer systems near the city of Lorca, southern Spain, using Synthetic Aperture Radar Interferometry (InSAR) with a light method necessitating a small number of interferograms rather than analysing hundreds of radar images. We computed nine interferograms with good coherence over the years 2004 and 2005. We analysed them by a two-step filtering process in order to characterise the atmospheric contribution and the ground deformation. We are then able to identify two deforming areas and quantify subsidence rates at 0.20 ± 0.02 mm/day south of Lorca and southeast to the city of Alhama de Murcia with the same efficiency as the studies using sophisticated InSAR methods. Using continuous records of water levels in boreholes, we deduced a mean storage coefficient ( S k ) at 4.1 × 10 − 3 which is very close to the previous published values, and coincides in this case to an inelastic deformation mode of all the system. With this value, we determine the groundwater level variations from the measurements of the ground subsidence.