Particulate Organic Matter Input Research Articles

Paired Synoptic and Long-Term Monitoring Datasets Reveal Decadal Shifts in Suspended Sediment Supply and Particulate Organic Matter Sources in a River-Estuarine System

The San Francisco Estuary, in central California, has several long-running monitoring programs that have been used to reveal human-induced changes throughout the estuary in the last century. Here, we pair synoptic records of particulate organic matter (POM) composition from 1990–1996 and 2007–2016 with more robust long-term monitoring program records of total suspended sediment (TSS) concentrations generally starting in the mid-1970s to better understand how POM and TSS sources and transport have shifted. Specifically, POM C:N ratios and stable isotope values were used as indicators of POM source and to separate the bulk POC pool into detrital and phytoplankton components. We found that TSS and POC sources have shifted significantly across the estuary in time and space from declines in terrestrial inputs. Landward freshwater and brackish water sites, in the Delta and near Suisun Bay, witnessed long-term declines in TSS (32 to 52%), while seaward sites, near San Pablo Bay, recorded recent increases in TSS (16 to 121%) that began to trend downwards at the end of the record considered. Bulk POM C:N ratios shifted coeval with the TSS concentration changes at nearly all sites, with mean declines of 12 to 27% between 1990–1996 and 2007–2016. The widespread declines in bulk POM C:N ratios and inferred changes in POC concentrations from TSS trends, along with the substantial declines in upstream TSS supply through time (56%), suggest measurable reductions in terrestrial inputs to the system. Changes in terrestrial TSS and POM inputs have implications for biotic (e.g., food web dynamics) and abiotic organic matter cycling (e.g., burial, export) along the estuarine continuum. This work demonstrates how human-generated environmental changes can propagate spatially and temporally through a large river-estuary system. More broadly, we show how underutilized monitoring program datasets can be paired with existing (and often imperfect) synoptic records to generate new system insight in lieu of new data collection.

Spatial Variation in Elemental and Isotopic Compositions of Carbon and Nitrogen in a Coastal Lagoon Reveals Natural and Anthropogenic Influences

Increased delivery of particulate organic matter (POM) to coastal lagoons has caused disturbance in nutrient cycling, water quality and aquatic biodiversity. Therefore, the major concern in coastal management is assessment of sources and pathways of POM in order to maintain ecosystem health. Elemental and isotopic of POM compositions are being increasingly used as useful markers for sources of POM in coastal ecosystems to obtain understanding of the nutrient sources and anthropogenic influences. In this study, variation in elemental and stable isotope compositions of carbon (C) and nitrogen (N) were measured in Cau Hai lagoon, Central Vietnam to characterize the possible sources of C and N. Variations in values of C/N ratios (8.17 ± 0.14) and 13C (-22.00‰ ± 0.13) indicated that POM was mainly of autochthonous origin due to high microalgae productivity. The values of 15N (3.83‰ ± 0.08) were likely inferred from potential input of POM from aquaculture practices. These results suggest that main sources of POM in the lagoon were derived from autochthonous microalgae and slightly anthropogenic impacts through aquaculture activities. Control POM load should be taken into account in maintaining water quality and biodiversity in the lagoon to inhibit microalgae biomass and shading due to nutrient enrichment.

Explicit spatial modeling at the pore scale unravels the interplay of soil organic carbon storage and structure dynamics.

The structure of soil aggregates plays an important role for the turnover of particulate organic matter (POM) and vice versa. Analytical approaches usually do not disentangle the continuous re-organization of soil aggregates, caught between disintegration and assemblage. This led to a lack of understanding of the mechanistic relationship between aggregation and organic matter dynamics in soils. In this study, we took advantage of a process-based mechanistic model that describes the interaction between the dynamic (re-)arrangement of soil aggregates, based on dynamic image analysis data of wet-sieved aggregates, to analyze the turnover of POM, and simultaneous soil surface interactions in a spatially and temporally explicit way. Our novel modeling approach enabled us to unravel the temporal development of aggregate sizes, organic carbon (OC) turnover of POM, and surface coverage as affected by soil texture, POM input, and POM decomposition rate comparing a low and high clay soil (18% and 33% clay content). Our results reveal the importance of the dynamic re-arrangement of soil structure on POM-related turnover of OC in soils. Firstly, aggregation was largely determined by the POM input fostering aggregates through additional gluing joints outweighing soil texture at lower decomposition rate, whereas at higher decomposition rate, soil texture had a higher influence leading to larger aggregates in the high clay soil. Secondly, the POM storage increased with clay content, showing that surface interactions may delay the turnover of OC into CO2 . Thirdly, we observed a structural priming effect in which the increased input of POM induced increased structural re-arrangement stimulating the mineralization of old POM. This work highlights that the dynamic re-arrangement of soil aggregates has important implications for OC turnover and is driven by underlying surface interactions where temporary gluing spots stabilize larger aggregates.

Effects of river inputs on particulate organic matter composition and distributions in surface waters and sediments of the Mersin Bay, Northeastern Mediterranean Sea

Terrestrial inputs-induced eutrophication in the P-depleted Northeastern (NE) Mediterranean shelf waters has led to changes in particulate organic matter (POM) composition and distributions in the water column and surface sediments. The present study aimed to understand the impacts of terrestrial nutrient and POM inputs on coastal eutrophication, bulk POM composition and concentrations in surface waters and sediments of the Mersin Bay, located at the Cilician Basin of NE Mediterranean Sea. The present results showed that the regional rivers and wastewater discharges markedly increased nutrient concentrations, leading to enhanced eutrophication and POM concentrations surface waters of the Mersin inner bay. The C/N and C/P molar ratios derived from the regressions of POM data in surface waters were 6.92 and 129, respectively. The higher C/N and C/P molar ratios in the surface sediments of productive Mersin Bay indicated selective decay of N, P-containing organic matter buried in muddy sediments. Close positive correlations were found in sediment organic matter and mud contents, indicating the crucial role of fine particles in transport and enrichment of organic matter in the muddy shelf sediments of NE Mediterranean Sea.

Trophic interactions and metal transfer in marine ecosystems driven by the Peruvian scallop Argopecten purpuratus aquaculture

AbstractThis study investigates the trophic interactions and As and Cd transfer along seven marine ecosystems in Peru. Five of these ecosystems are driven by aquaculture of the Peruvian scallop Argopecten purpuratus. A southward increased gradient of δ15N was observed among the three examined regions along the Peruvian coast. The stable isotope analysis in R (SIAR)‐stable isotope mixing models helped to clarify the feeding ecology of A. purpuratus and its important predators (e.g., Bursa ventricosa, Romaleon setosum). The food items of A. purpuratus can be ranked in decreasing order of importance: seston > sediment > particulate organic matter (POM) > brackish‐and‐fresh water POM input, while A. purpuratus itself was found to be the main prey item for predators. The highest trophic magnification factors (TMFs) were 1.46 and 1.07 for As and Cd, respectively, and were both found at the location in front of the Illescas Reserve Zone (northern Peru). Metal biomagnification and non‐biomagnification effects were found in the Peruvian marine food webs, but A. purpuratus always fitted the trophic metal magnification or bio‐dilution regression model as intermediate consumer and/or prey. The TMFs and linear metal relationships implied that As contamination is a serious concern in marine ecosystems in Peru.

Dynamic of organic matter and meiofaunal community on a river-dominated shelf (Rhône prodelta, NW Mediterranean Sea): Responses to river regime

In the oligotrophic context of the Mediterranean Sea, riverine inputs of particulate organic matter represent an important source of food for benthic communities. However, since most of these inputs are delivered during short, but intense flood events, communities living in the vicinity of river mouths are also exposed to strong and frequent physical disturbances. A very tight and complex relationship links river dynamic and macrofaunal communities in Mediterranean deltas, but less is known on the response of meiobenthic communities to river regime. In 2010, sediments cores were collected in the Rhône River prodelta in winter and spring before the flooding of the Rhône River tributaries in June, and then twice in the early and late summer. The hypothesis was that increased runoff and export of terrigenous material would induce major changes in the sediment biochemistry, which would in turn trigger modifications in abundances and vertical distribution of the meiofauna. The origin and quality (lability, degradation state) of the different pools of organic matter preserved in these recent sediments were determined using bulk geochemical and molecular analyses (fatty acids, amino acids). Vertical profiles of descriptors for organic matter origin and quality revealed major changes in the nature of the inputs occurring at monthly time scales. Inputs of plant detritus from autumnal and winter flood events were still visible in the cores collected in February and April. A few days after the June 2010 high-discharge event, a newly deposit (~7 cm) containing soil organic matter has recovered the prodeltaic sediments and the resident meiofaunal community, but at the end of August only 2 cm of this deposit remained. Multivariate analyses furthermore highlighted that the meiofaunal community was driven by both the trophic conditions and the deposition of a new sediment layer driven by the hydrological regime of the Rhône River. In April, increased abundances of meiofauna were observed in response to the sedimentation of labile organic matter after the spring bloom. The June high-discharge event affected the meiofauna with a reduction of its abundance and the burial of the resident meiobenthic community. However, the meiofauna recovered in less than two months after this disturbance, showing the strong resilience of this component of the benthic ecosystem in this high energy environment.

Emission of greenhouse gases from French temperate hydropower reservoirs

The emission of CO2 and CH4 by diffusion, bubbling and downstream was measured in ten reservoirs representative of the diversity of French hydropower reservoirs in 2016. In all reservoirs, higher fluxes were measured in summer than in spring and winter. Low fluxes were measured in alpine reservoirs as compared to run-of-the-river and storage reservoirs. The low temperatures as well as the low organic matter input from the watershed explained this observation. Bubbling was higher in run-of-the-river reservoirs, as compared to storage reservoirs. This was related to a higher ratio between the length of wooded river network in the watershed, and the reservoir surface area. This ratio was considered as a proxy for allochthonous particulate organic matter input per reservoir surface unit and its accumulation in the sediments. In the larger storage reservoirs, this preferential sedimentation area was limited to the river-reservoir transition zone, the extent of which is primarily a function of reservoir hydrodynamic and morphological parameters. Conversely, the long water residence time in deep storage reservoirs favoured greenhouse gas (GHG) accumulation in the bottom water and diffusion and downstream pathways as compared to bubbling. Classical drivers of GHG emissions in large reservoirs partly failed to explain our measurements, especially for bubbling which seemed to be primarily controlled by allochthonous particulate organic matter input per reservoir surface area. This may results from the small size and the large diversity of the studied reservoirs as compared to the larger systems classically used for global estimates.

Non-condensed shell beds in hiatal successions: instantaneous cementation associated with nutrient-rich bottom currents and high bivalve production

Pelagic carbonate deposits formed by the thin-shelled, epifaunal, originally bimineralic bivalve Bositra buchi were geographically widely distributed in the Tethyan basins during the Middle Jurassic. Here, to evaluate conditions that allowed the formation of peculiar, metre-scale, densely-packed shell beds primarily formed by Bositra, we assess size distributions and preservation of this bivalve in thin sections at ten sites in the Pieniny Klippen Belt and Peri-Klippen units (Western Carpathians), representing a bathymetric transect from pelagic-platform tops with shell beds up to slope environments where small filaments occur with spicules and radiolarians. Although Bositra shell beds are modulated by transport and winnowing, three types of evidence indicate that they primarily reflect high bivalve productivity. First, we find that size distributions of this species form a bathymetric gradient, from the dominance of remains smaller than 0.5 mm in low- energy slope environments, to 0.5-2 mm on muddy platform edges, up to lensoid shell beds with large valves (~2-15 mm) occurring on platform tops exposed to bottom currents. Although sediment winnowing from shell beds contributed to the rarity of small-sized specimens in platform-top environments, the bathymetric shift in the shape of size distributions is not purely driven by fragmentation and by size-selective transport of small specimens into slope environments because the average valve thickness declines with depth and thick fragments do not occur in slope environments. High abundances of suspension-feeding Bositra preferentially associated with indicators of bottom currents at oligophotic or aphotic depths indicate that plankton productivity was probably sourced by nutrient-rich internal waves that intersected platform tops, leading to low juvenile mortality in Bositra populations. In contrast, populations in deeper environments with the limited input of particulate organic matter failed to achieve maturity. Second, the inner, originally nacreous shell layer of Bositra is now represented by neomorphic calcite that is luminescent, enriched in Mn and depleted in Mg, indicating that this layer was not dissolved in the taphonomic active zone. Third, fibrous- acicular low-Mg calcite cements that characteristically coat Bositra in shell beds show blotchy luminescence and highly irregular Mg distribution, indicating that they were precipitated as high-Mg calcite cements. Fibrous-acicular cements in shell beds do not coat upward- facing sides of valves covered by a first phase of micrite whereas they fully coat elevated portions of the same valves. Therefore, they were precipitated at very high rates concurrently with micrite deposition in shelters. Nutrient-rich bottom currents thus simultaneously increased (1) Bositra survivorship by enhancing primary productivity and (2) cementation rate by renewal of saturation of pore waters in the taphonomic active zone at platform tops. In spite of the association of Bositra shell beds with major hiatal surfaces, (1) the rapid precipitation of fibrous-acicular cements, (2) the rarity of iron-stained Bositra valves in shell beds, and (3) the significantly smaller concentrations of iron in shell-rich muds than in shell-poor muds indicate that shell beds do not represent long-term hiatal or lag concentrations. They rather represent composite shell beds that record high population densities of these bivalves at ecological time scales. Spatial variation in intensity of bottom currents and in sea- floor topography generated by faulted blocks resulted (1) in hiatal surfaces with mineralized hardgrounds at high-energy current-swept sites and (2) in preservation of up to 1 m-thick lensoid shell beds at sites with less intense but persistent currents. Bositra shell beds thus ultimately have patchy horizontal and stratigraphic distribution.

Heterogeneity of the chemical composition and thermal stability of particulate organic matter in French forest soils

In temperate forests, soils contain a significant part of the ecosystem carbon (C) stock that can be subjected to C losses upon global changes. In forest soils, particulate organic matter (POM) is a major contributor to the labile C pool and its dynamics can significantly influence the overall total soil organic carbon stock. However, POM has been overlooked in forest soils, specifically in deep horizons.We isolated the POM fraction of mineral soil samples collected in 52 French forest sites, using a size- (> 50 μm) and density- (< 1.6 g·cm−3) fractionation scheme. These soil samples presented variability in terms of depth (0–10 cm; 40–80 cm), soil class (dystric Cambisol, eutric Cambisol, entic Podzol) and vegetation type (deciduous, coniferous). First, we determined the POM chemical composition and thermal stability using elemental analysis, mid infrared-attenuated total reflectance spectroscopy and Rock-Eval thermal analysis. Then, we assessed how depth, soil class and vegetation type influenced POM chemistry and thermal stability in these temperate forest soils.Depth, soil class and vegetation type were all important factors influencing POM chemistry and thermal stability. Variations in POM chemistry (higher C/N ratio, lower ether + alcohol and carbonyl + carboxyl ratios and decrease in hydrogen-rich compounds) and increase in thermal stability with depth suggested different POM input sources for the surface and deep soil layers and an increased biogeochemical stability of POM in deep soil layers. Whatever the vegetation, POM in eutric Cambisols had lower aliphatic and higher aromatic ratios than POM in dystric Cambisols. POM in soils under deciduous trees had higher aliphatic and carbonyl + carboxyl ratios and lower aromatic ratio, more hydrogen-rich and less oxygen-rich compounds than POM in soils under coniferous trees, reflecting the difference in litter chemistry between the two vegetation types. POM from deciduous plots was also significantly more thermally stable than from coniferous plots, suggesting a higher biogeochemical stability for POM in deciduous forest soils.This study highlights the variations in POM chemistry and thermal stability existing within and among soil profiles and the role of depth, soil class and vegetation type in these variations. It appears that if POM can be regarded as a labile carbon fraction in soils, its lability varies depending on the ecosystem (soil, vegetation) and depth considered.

Copepods act as omnivores in a (sub)tropical reservoir: Implication for the top-down effect on phytoplankton

Tropical reservoirs in China receive a high input of organic matter from surrounding watersheds and this represents a significant resource for zooplankton consumers. Copepods are often the dominant zooplankton group in the tropical systems. Whether copepods tend to be omnivorous and their potential cascading effect on phytoplankton are subjects of debate. We used stable carbon and nitrogen isotope analyses to elucidate the allochthony and trophic positions of two copepod species (Phyllodiaptomus tunguidus and Mesocyclops thermocyclopoides) and one cladoceran species (Diaphanosoma orghidani) over a one-year period in a tropical oligo-mesotrophic reservoir in China. We assumed the filter-feeding D. orghidani was herbivorous and we used it as a baseline indicator of δ15N to estimate the trophic position of the two copepods. P. tunguidus and M. thermocyclopoides had an average trophic level that was 0.7 and 0.5 higher, respectively, than that of D. orghidani. M. thermocyclopoides showed seasonal differences in trophic position and an increase in trophic position with rising temperatures, whereas P. tunguidus remained omnivorous throughout the year. All three zooplankton species had a much higher degree of allochthony in the flood season than in the dry season, and their allochthony was positively related to the allochthony of the particulate organic matter input. The two copepods’ omnivorous behavior suggests their allochthony was primarily linked to microbial food web based on the input of terrestrial organic matter. The chlorophyll a to total phosphorus ratio was much higher when P. tunguidus dominated the zooplankton community than when D. orghidani dominated. The ratio was positively related to the ratio of omnivorous adult copepods to cladoceran biomass but not to the zooplankton:phytoplankton biomass ratio. Our results suggest that copepods tended to be omnivorous and relied heavily on allochthonous material in the study reservoir. The indirect cascading effect is likely to be stronger than the direct grazing effect, resulting in a positive effect of copepods on the phytoplankton.

Relationships between depth and δ15N of Arctic benthos vary among regions and trophic functional groups

Stable isotope ratios of nitrogen (δ15N) of benthic primary consumers are often significantly related to water depth. This relationship is commonly attributed to preferential uptake of 14N from sinking particulate organic matter (POM) by microbes, and suggests that relationships between δ15N and water depth may be affected by local POM sources and flux dynamics. We examined the relationships between δ15N and water depth (20–500 m) for six trophic functional groups using a mixed effects modelling approach, and compared relationships between two contiguous Arctic marine ecosystems with different POM sources and sinking export dynamics: the Canadian Beaufort Sea and Amundsen Gulf. We demonstrate for the first time in the Arctic that δ15N values of mobile epifaunal carnivores increased as a function of depth when considered separately from benthopelagic and infaunal carnivores, which contrarily did not exhibit increasing δ15N with depth. The δ15N of suspension/filter feeders, infaunal deposit feeders and bulk sediment also increased with water depth, and the slopes of the relationships were steeper in the Amundsen Gulf than in the Beaufort Sea. We propose that regional differences in slopes reflect differences in POM sources exported to the benthos. In the Beaufort Sea, terrestrial POM discharged from the Mackenzie River quantitatively dominates the sedimentary organic matter across the continental shelf and slope, dampening change in δ15N of benthic POM with depth. In the Amundsen Gulf, we attribute a faster rate of change in δ15N of POM with increasing depth to larger contributions of marine-derived POM to the benthic sedimentary pool, which had likely undergone extensive biological transformation in the productive offshore pelagic zone. Differences in POM input regimes among regions should be considered when comparing food webs using stable isotopes, as such differences may impact the rate at which consumer δ15N changes with depth.

Substantial soil organic carbon retention along floodplains of mountain streams

AbstractSmall, snowmelt‐dominated mountain streams have the potential to store substantial organic carbon in floodplain sediment because of high inputs of particulate organic matter, relatively lower temperatures compared with lowland regions, and potential for increased moisture conditions. This work (i) quantifies mean soil organic carbon (OC) content along 24 study reaches in the Colorado Rocky Mountains using 660 soil samples, (ii) identifies potential controls of OC content based on soil properties and spatial position with respect to the channel, and (iii) and examines soil properties and OC across various floodplain geomorphic features in the study area. Stepwise multiple linear regression (adjusted r2 = 0.48, p &lt; 0.001) indicates that percentage of silt and clay, sample depth, percent sand, distance from the channel, and relative elevation from the channel are significant predictors of OC content in the study area. Principle component analysis indicates limited separation between geomorphic floodplain features based on predictors of OC content. A lack of significant differences among floodplain features suggests that the systematic random sampling employed in this study can capture the variability of OC across floodplains in the study area. Mean floodplain OC (6.3 ± 0.3%) is more variable but on average greater than values in uplands (1.5 ± 0.08% to 2.2 ± 0.14%) of the Colorado Front Range and higher than published values from floodplains in other regions, particularly those of larger rivers.

Permanganate-oxidizable soil organic matter in floodplain soils

Riverine floodplain soils contain large stocks of soil organic matter (SOM) also in larger depth. Qualitative characterization of SOM, especially in the subsoil horizons of floodplain soils, is scarce. To gain deeper insights into the composition of SOM and the driving parameters of SOM processing, we studied 121 horizons of 18 soil profiles along the Central Elbe River (Germany) by determining permanganate-oxidizable carbon (POXC) and a stability parameter derived from diffuse reflectance infrared (DRIFT) spectroscopy. The absolute and relative amounts of POXC varied between the horizons. While the topsoil horizons contained the largest total contents of POXC (average 923mgkg−1 soil), the largest relative proportions were detected in subsoil horizons characterized by reducing conditions and water saturation (up to 19% of total organic C), which exceeded those reported for terrestrial soils. The absolute contents of POXC were positively and partially highly significantly correlated with those of total organic, hot-water extractable and microbial-biomass C, confirming its nature as slightly processed and relatively labile fraction of SOM. The correlations were distinctly weaker for the reduced horizons, indicating hampered decomposition. The contents of POXC were also positively correlated with the DRIFT stability parameter, expressing the ratio of aliphatic to aromatic C. Our results suggest the presence of a large fraction of less processed SOM in the subsoils of floodplain soils, originating from inputs of particulate organic matter that was buried and weakly decomposed at water saturation, and partially from charcoal particles, also transported by the river water. The results point to a possible limitation of POXC as an indicator of decomposition to soils lacking an aquic moisture regime.

The effect of summer monsoon on pelagic and littoral food webs in a large regulated reservoir (Lake Paldang, Korea): A stable isotope approach

To investigate the effect of summer monsoon-derived inputs of particulate organic matter (POM) on patterns of stable isotopes in the food web in a reservoir, we traced dietary sources of carbon and nitrogen in pelagic zooplankton and herbivorous littoral zoobenthos following a monsoonal disturbance in Lake Paldang, a large regulated reservoir in Korea. Carbon and nitrogen stable isotopes were analyzed in POM, zooplankton, sedimentary organic matter, zoobenthos, and piscivorous fishes in pre- and post-summer monsoon periods. Sharp depletion of 13C and enrichment of 15N of POM along with elevated POC/Chl a ratios occurred following the summer monsoon period, reflecting the rapid reduction of phytoplankton biomass and a pulsed supply of terrestrial organic detritus. Herbivorous zooplankton δ13C values, which were initially similar to POM δ13C values in the pre-summer monsoon period, decreased to nearly that of terrestrial organic matter, providing isotopic evidence of allochthonous contribution to zooplankton in the post-summer monsoon period. In contrast, herbivorous zoobenthos in the littoral area and higher fishes appeared to have a similar stable isotope composition between the pre- and post-summer monsoon period. Our findings indicate that although monsoon storms dramatically decrease phytoplankton biomass, the augmented allochthonous material after the summer monsoon offsets this effect temporarily by subsidizing pelagic zooplankton production. Allochthonous subsidies to herbivorous littoral zoobenthos and piscivorous fishes are relatively limited.

Planting grass filter strips: Does it influence the structure and function of riparian habitats of agricultural headwater streams?

AbstractGrass filter strips are strips of cool or warm season grasses planted adjacent to agricultural streams to reduce nutrient, pesticide, and sediment input. This conservation practice is the most frequently planted riparian buffer type in the United States. Previous studies have not evaluated how grass filter strips alter the structure and function of riparian habitats of agricultural streams. Our objective was to examine the research hypothesis that planting grass filter strips will influence the structure and function of riparian habitats of channelized agricultural headwater streams. We sampled riparian vegetation, quantified coarse particulate organic matter input and nutrient input, and measured water temperature within two unplanted riparian habitat sites, two riparian habitat with grass filter strips sites, and two forested riparian habitat sites of agricultural headwater streams in central Ohio. Forested riparian habitats exhibited greater percent maximum frequency of woody vegetation and reduced water temperatures than unplanted riparian habitats and grass filter strips. Forested riparian habitats also exhibited greater canopy cover, woody vegetation taxa richness, and coarse particulate organic matter input than grass filter strips and greater riparian widths and woody vegetation abundance than unplanted riparian habitats. Grass filter strips did not differ in structure and function from unplanted riparian habitats. We conclude that planting grass filter strips does not influence the structure and function of riparian habitats of channelized agricultural headwater streams.

Assessing source contributions to particulate organic matter in a subtropical estuary: A biomarker approach

Assessing the sources and quantifying the contributions of particulate organic matter (POM) in estuaries is a challenge. Here we apply source-specific biomarkers to assess POM sources in an estuary receiving suspended material from freshwater wetlands, fringe mangroves and coastal environments. A three end-member mixing model, including terrestrial, estuarine and marine end-member contributions was developed and successfully validated to assess general OM dynamics and hydrologic processes that control POM distributions within the Shark River estuary in South Florida. Low tide and wet season conditions coincided with an enhanced signal of the freshwater end-member biomarker abundance, while high tide and dry season conditions resulted in enhanced POM input of marine origin. Incoming tide was observed to be an important factor in the re-suspension and tidal pumping of mangrove-derived POM, which seems to be the dominant source of particulate organic carbon (POC) in the estuary. The three end-member conceptual model was tested to obtain a rough estimate of POC source strength, with the ultimate goal of constraining carbon budgets in this sub-tropical estuary. Mangrove-derived POC flux of ca. 5.3×105 to 1.0×106kg/yr POC from the Shark River to the Gulf of Mexico were estimated, but end-member values used in the assessment need to be better constrained to reduce the degree of variability.

Hypoxia in Chilean Patagonian Fjords

Chilean Patagonia is one of the largest estuarine systems in the world. It is characterized by a complex geography of approximately 3300 islands, a total surface area of 240,000km2, and 84,000km of coast line, including islands, peninsulas, channels, fjords, and sounds. The Chilean Patagonia Interior Sea is filled with a mixture of sea, estuarine, and fresh waters, and is characterized by a two layer vertical general circulation. Dissolved oxygen (DO) conditions in these fjords were analyzed based on historic salinity, dissolved oxygen and nutrient data from 1200 oceanographic stations. Horizontal advection of adjacent well oxygenated Subantarctic Waters (5–6mLL−1) was the mayor source of DO in the deep layers of the Interior Sea. Incoming DO was consumed by the respiration of autochthonous and allochthonous particulate organic matter, as ocean water flows towards the continental fjord heads, reaching near-hypoxic (2–3mLL−1) or hypoxic levels (<2mLL−1). As DO declined nutrient concentrations increased towards the fjord heads (from ∼1.6μM PO4−3 and ∼16μM NO3− to ∼2.4μM PO4−3 and ∼24μM NO3−). Overall, DO conditions in the Interior Sea were mostly the result of a combination of physical and biogeochemical processes. In all eastern channels and fjords, a low DO zone developed near the fjord heads (<4mLL−1) as a result of larger allochthonous particulate organic matter inputs transported by local rivers. This enhanced organic matter input to the deep layer increased DO consumption due to respiration and overwhelmed the oxygen supplied by horizontal advection. Out of the 90 Chilean Patagonian gulfs, channels and fjords analyzed, 86 systems were oxic (>2mLL−1) and four hypoxic (<2mLL−1), but only at their heads. None were found to be anoxic (0mLL−1). We found these DO conditions to be permanent features of the Chilean Patagonia Interior Sea.

Changes in the adsorption of bisphenol A, 17 α-ethinyl estradiol, and phenanthrene on marine sediment in Hong Kong in relation to the simulated sediment organic matter decomposition

Marine sediment with an input of particulate organic matter was incubated to simulate the early aging process. On the sediment after various incubation periods, adsorption and desorption tests were conducted for three selected organic micropollutants: bisphenol A (BPA), 17α-ethinyl estradiol (EE2), and phenanthrene (Phe). The results showed significant sediment organic matter (SOM) decomposition during the incubation, and the SOM decay and transformation had a profound impact on the adsorption of organic compounds by the sediment. An increasing-delay-increasing pattern of change was observed for the SOM normalized partition coefficients of EE2 and Phe. This change was accordant to the transformation of SOM from labile organics into active biomass and its microbial products, and finally into more condensed and humic-like substances. Comparison between the 3 model micropollutants indicates that the chemical adsorption behaviors were mostly affected by their hydrophobic properties.

Glacial-interglacial variability in ocean oxygen and phosphorus in a global biogeochemical model

Abstract. Increased transfer of particulate matter from continental shelves to the open ocean during glacials may have had a major impact on the biogeochemistry of the ocean. Here, we assess the response of the coupled oceanic cycles of oxygen, carbon, phosphorus, and iron to the input of particulate organic carbon and reactive phosphorus from shelves. We use a biogeochemical ocean model and specifically focus on the Last Glacial Maximum (LGM). When compared to an interglacial reference run, our glacial scenario with shelf input shows major increases in ocean productivity and phosphorus burial, while mean deep-water oxygen concentrations decline. There is a downward expansion of the oxygen minimum zones (OMZs) in the Atlantic and Indian Ocean, while the extension of the OMZ in the Pacific is slightly reduced. Oxygen concentrations below 2000 m also decline but bottom waters do not become anoxic. The model simulations show when shelf input of particulate organic matter and particulate reactive P is considered, low oxygen areas in the glacial ocean expand, but concentrations are not low enough to generate wide scale changes in sediment biogeochemistry and sedimentary phosphorus recycling. Increased reactive phosphorus burial in the open ocean during the LGM in the model is related to dust input, notably over the southwest Atlantic and northwest Pacific, whereas input of material from shelves explains higher burial fluxes in continental slope and rise regions. Our model results are in qualitative agreement with available data and reproduce the strong spatial differences in the response of phosphorus burial to glacial-interglacial change. Our model results also highlight the need for additional sediment core records from all ocean basins to allow further insight into changes in phosphorus, carbon and oxygen dynamics in the ocean on glacial-interglacial timescales.

Tracing estuarine organic matter sources into the southern North Sea using C and N isotopic signatures

Sources and distribution of particulate organic matter in surface waters of the Humber and Thames estuaries and in the East Anglian plume in the southern North Sea were investigated in winter 2006/2007. Carbon (C) and nitrogen (N) stable isotopes provided evidence for the presence of three particulate organic matter sources; riverine plankton (δ13C −30 ‰ and δ15N 7.9 ‰) identified in the Thames estuary only, marine plankton (average δ13C −21.4 ‰ and δ15N 4.5 ‰) and a third source with an enriched 13C signature (>−16.7 ‰) and elevated C:N ratio (>12.7). Particulate organic matter with enriched 13C values were observed throughout the Humber estuary and at the marine end-member of the Thames estuary. While bacterial cycling of organic carbon undoubtedly takes place within these estuaries, these processes on their own are unlikely to account for the isotopic signatures seen. The 13C enriched organic matter source is suggested to be due to particulate organic matter input from marsh plants and seagrasses such as Spartina spp. and Zostera on the adjacent salt marshes and mudflats and/or macroalgae along the banks of the estuaries. This 13C enriched signal was also identified approximately 50 km offshore within the southern North Sea, in the East Anglian plume, which transports UK riverine water off-shore in a discrete plume. This plume therefore provides a mechanism to transport this estuarine derived organic matter pool offshore out of the estuaries. These results indicate that estuarine derived organic matter from marsh plants, seagrasses and/or macroalgae contributes to the southern North Sea organic matter pool and is therefore likely to contribute to winter-time shelf sea carbon and nitrogen cycles.