In urban and degraded areas, ectoparasite abundance can be affected by increasing human population density and habitat fragmentation. This study aimed to characterize the ectoparasitic fly community associated with bats in the urban green areas of Sergipe, Brazil. Campaigns were conducted monthly, for two consecutive nights, between September 2019 and February 2021. To capture the bats, ten mist nets were set up inside and at the edge of the habitat fragments. All ectoparasites found were removed from the bats and stored in 70% alcohol. The specificity index, parasitological rates, and level of parasite aggregation were calculated, and the influence of host sex and seasonality on parasitological rates were verified for the most parasitized bats. The collected ectoparasites corresponded to the families Nycteribiidae (S = 1; n = 26) and Streblidae (S = 13; n = 849), with Trichobius costalimai and Medistopoda aranea being the most abundant species. For some interactions, there was an influence of host sex on the prevalence rates, with the highest number of parasites being found on females, which can be explained by their greater susceptibility to parasitism owing to their long stay in roosts. The seasonality influenced the parasitological rates, and opposing patterns (from what was expected) were observed for some interactions; this influence may be due to the biological differences between parasite species. This study provides relevant data on this interaction, especially for urban areas in northeastern Brazil, expanding the number of studies in the State of Sergipe and promoting future studies.
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