Klebsiella Pneumoniae Research Articles

Reducing the effective dose of doxycycline using chitosan silver nanocomposite as a carriers on gram positive and gram-negative bacteria

AbstractDoxycycline (Doxy) is a tetracycline antibiotic with a potent antibacterial activity against a broad range of bacteria. Using nanotechnology is one feasible way to increase the antibiotics’ ability to penetrate the body and increase their antibacterial effectiveness. In this work, we report the formation of a stable green synthesized silver nanoparticles (AgNPs) by chitosan with Doxy nanocomposite for the first time. The obtained nanoparticles were characterized by transmission electron microscopy (TEM), zeta-potential, UV-Visible spectroscopy and four transform infrared spectroscopy (FTIRs). The antibacterial effect of doxy, AgNPs and doxy/AgNPs were determined on Gram-positive Staphylococcus aureus, Streptococcus mutans and Gram-negative Escherichia coli, Klebsiella pneumonia. This combined therapeutic agent restored the susceptibility of doxy and showed an antibacterial activity against tested bacteria. AgNPs has absorption peak at 445 nm, mixing of Doxy with AgNPs causes all doxy absorptions to red shift and a broadening in surface plasmon resonance (SPR) for AgNPs and show a slight increase in particle size of AgNPs from 12 ± 2 nm to 14 ± 2 nm with high stability as zeta potential was 29 mv and 48.5mv for AgNPs and Doxy/AgNPs respectively. The antibacterial effect of Doxy/AgNPs nanocomposite was found to be twice effect of free doxy, suggesting a synergistic interaction between the two components. In conclusion, synergy of doxy with AgNPs is quite promising for antibiotic resistant strains. These results highlight the ability of AgNPs to boost the efficacy of the doxycycline.

The Coexistence of Klebsiella pneumoniae and Candida albicans Enhanced Biofilm Thickness but Induced Less Severe Neutrophil Responses and Less Inflammation in Pneumonia Mice Than K. pneumoniae Alone

Due to the possible coexistence of Klebsiella pneumoniae (KP) and Candida albicans (CA), strains of KP and CA with biofilm production properties clinically isolated from patients were tested. The production of biofilms from the combined organisms (KP+CA) was higher than the biofilms from each organism alone, as indicated by crystal violet and z-stack immunofluorescence. In parallel, the bacterial abundance in KP + CA was similar to KP, but the fungal abundance was higher than CA (culture method), implying that CA grows better in the presence of KP. Proteomic analysis was performed to compare KP + CA biofilm to KP biofilm alone. With isolated mouse neutrophils (thioglycolate induction), KP + CA biofilms induced less prominent responses than KP biofilms, as determined by (i) neutrophilic supernatant cytokines (ELISA) and (ii) neutrophil extracellular traps (NETs), using immunofluorescent images (neutrophil elastase, myeloperoxidase, and citrullinated histone 3), peptidyl arginine deiminase 4 (PAD4) expression, and cell-free DNA. Likewise, intratracheal KP + CA in C57BL/6 mice induces less severe pneumonia than KP alone, as indicated by organ injury (serum creatinine and alanine transaminase) (colorimetric assays), cytokines (ELISA), bronchoalveolar lavage fluid parameters (bacterial culture and neutrophil abundances using a hemocytometer), histology score (H&E stains), and NETs (immunofluorescence on the lung tissue). In conclusion, the biofilm biomass of KP + CA was mostly produced from CA with less potent neutrophil activation and less severe pneumonia than KP alone. Hence, fungi in the respiratory tract might benefit the host in some situations, despite the well-known adverse effects of fungi.

Pioneering Klebsiella Pneumoniae Antibiotic Resistance Prediction With Artificial Intelligence-Clinical Decision Support System-Enhanced Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry: Retrospective Study.

The rising prevalence and swift spread of multidrug-resistant gram-negative bacteria (MDR-GNB), especially Klebsiella pneumoniae (KP), present a critical global health threat highlighted by the World Health Organization, with mortality rates soaring approximately 50% with inappropriate antimicrobial treatment. This study aims to advance a novel strategy to develop an artificial intelligence-clinical decision support system (AI-CDSS) that combines machine learning (ML) with matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS), aiming to significantly improve the accuracy and speed of diagnosing antibiotic resistance, directly addressing the grave health risks posed by the widespread dissemination of pan drug-resistant gram-negative bacteria across numerous countries. A comprehensive dataset comprising 165,299 bacterial specimens and 11,996 KP isolates was meticulously analyzed using MALDI-TOF MS technology. Advanced ML algorithms were harnessed to sculpt predictive models that ascertain resistance to quintessential antibiotics, particularly levofloxacin and ciprofloxacin, by using the amassed spectral data. Our ML models revealed remarkable proficiency in forecasting antibiotic resistance, with the random forest classifier emerging as particularly effective in predicting resistance to both levofloxacin and ciprofloxacin, achieving the highest area under the curve of 0.95. Performance metrics across different models, including accuracy, sensitivity, specificity, positive predictive value, negative predictive value, and F1-score, were detailed, underlining the potential of these algorithms in aiding the development of precision treatment strategies. This investigation highlights the synergy between MALDI-TOF MS and ML as a beacon of hope against the escalating threat of antibiotic resistance. The advent of AI-CDSS heralds a new era in clinical diagnostics, promising a future in which rapid and accurate resistance prediction becomes a cornerstone in combating infectious diseases. Through this innovative approach, we answered the challenge posed by KP and other multidrug-resistant pathogens, marking a significant milestone in our journey toward global health security.

Bacteriology and Physicochemical Analysis of Borehole Water in Some Hostels of a Tertiary Institution in Port Harcourt, Nigeria

Several factors influence the quality of water for human consumption. Most of these factors are more of anthropogenic origin than nature and thus exercises an untold health effect on the end-users of such water body. Bacteriology and Physicochemical Analysis of Borehole Water in Some Hostels of a Tertiary Institution in Port Harcourt, Nigeria. Water samples were collected from six (6) hostels for each study period, and subjected to standard laboratory procedures to analyze for parameters such as pH, nitrite, nitrate, dissolved oxygen (DO), electrical conductivity (EC), Phosphate, as well as standard procedures for antibiotics susceptibility and molecular characterization. Result of the physicochemical parameters showed that the parameters ranged from 5.26±3.53 mg/L to 7.61±0.01 mg/L forpH; 0.61±0.01 to 2.56±0.01 mg/L for Dissolved Oxygen (DO); 96±1.41 μS/cm to 503.5±0.71μS/cm for electrical conductivity; 4.56±0.03 mg/L to 20.3±0.01 mg/L for nitrate; 0.003±0mg/L to 0.03±0mg/L for nitrite; 0.12±0mg/L to 0.17±0mg/L for phosphate. Statistical evaluation showed there was a significant difference (p < 0.05) between the mean values of physicochemical parameters studied, except for pH that recorded no statistical difference (p > 0.05). From the study, 5.6% of Staphylococcus species were resistant to Pefloxacin and Rocephin, while 5.9% of Bacillus species were resistant to Ampiclox. Similarly, 3.33% of Salmonella species were resistant to Augmentin, while the rest of the gram negative isolates were either susceptible or within an intermediate range of susceptibility to the antibiotics tested. Molecular characterization of some bacterial species isolated had pairwise identity with Klebsiella pneumonia strain CP27 and Escherichia coli strain RIZHAO 498.1, Staphylococcus haemolyticus strain SH1. The study has shown that the physicochemical water quality variables were all within the WHO limits, with bacterial species having high percentage susceptibility to the antibiotics tested. Regular water quality monitoring is however recommended to ensure continuous access to water of good quality in hostels within the university community.

Pulsed electric field at resonance frequency combat Klebsiella pneumoniabiofilms.

Healtcare-associated infections have increased due to the development of antimicrobial resistance (AMR) of Gram-negative pathogens (GNPs) and the development of outbreacks over the past two decades. In this work, we investigated how exposure to positive electric pulses affects the growth characteristics of Klebsiella pneumonia (K. pneumonia), a common cause of pneumonia. We explored the impact of varying exposure frequencies (0.2-2Hz) and time (15-90min, at resonance frequency) on bioelectric signals produced during cell division, biofilm formation, and bacterial antibiotic susceptibility. Our research found that an extremely low-frequency pulsed electric field (ELF-PEF) significantly inhibited K. pneumonia growth. Specifically, exposure to 0.8Hz for one hour increased the antibiotic susceptibility of K. pneumonia to inhibitors of cell wall formation, proteins, β-lactamase, DNA, and other substances. We also noticed a notable decrease in K. pneumonia biofilm development exposed to ELF-PEF. Our results suggest that the interaction of K. pneumonia cells with ELF-PEF at the specified frequency and time alters cellular activity and bacterial structure. This technique may be used in the future to treat K. pneumonia infections both in vitro and in vivo.

Investigating the role of PmrB mutation on Colistin antibiotics drug resistance in Klebsiella Pneumoniae

Klebsiella pneumoniae, a member of the Enterobacteriaceae family, naturally resides in the digestive tracts of both healthy animals and humans. Carbapenem-resistant Klebsiella pneumoniae (CRKP) poses a significant health risk for hospitalized patients worldwide, greatly reducing the effectiveness of commonly used antibiotics. This leaves healthcare providers with limited treatment options, often relying on colistin. PmrB is important for the survival of Klebsiella pneumonia and, a mutation in the PmrB protein is accountable for the development of colistin antibiotic resistance in Klebsiella pneumonia. This is especially important because colistin is a fundamental component in the treatment of pneumonia. Three mutated residues—T157P, G207D, and T246A—are responsible for colistin resistance. The structural alterations and underlying mechanisms in the PmrB protein that cause resistance owing to mutation remain unclear. As a result, this study is focused to the exploration of the putative mechanism of resistance resulting from these mutations, as well as the structure modification of normal and mutant PmrB proteins, using molecular docking and molecular dynamics simulations analysis. Our results demonstrated that the interaction paradigm for the mutants has been altered and thus showing a significant effect upon the hydrogen bonding network. Interestingly, the binding of Colistin with the three mutant demonstrate unstable behavior as compared with WT+Colistin. The proposed drug-resistance mechanism will help to guide the development of PmrB drugs. These finding may give a new framework for developing novel drugs against the mutant version of PmrB.

Spectroscopic and chemical characterization of the novel Minocycline/Mn complex with evaluation of its invitro potent antioxidant activity and high antibacterial effect against Escherichia coli (ATCC 8739), Bacillus subtilis (ATCC6633), Staphylococcus aureus (ATCC 6538), and Klebsiella pneumonia (ATCC 13883)

Background and objectiveMinocycline (Mino) is a broad-spectrum antimicrobial that is quickly and fully absorbed. Mino is considered a unique tetracycline derivative. Recently, the number of commercially available antibacterial agents has declined, failing to keep pace with the number of challenges of treating pathogens resistant to multiple drugs. Therefore, it is necessary to develop new classes of antibiotics with different modes of action. Material and methodsThe Mino/manganese (Mino/Mn) complex was synthesized and characterized using elemental analysis, spectroscopic methods (infrared (IR), ultraviolet (UV), X-ray diffraction (XRD)), magnetic susceptibility, scanning electron microscopy SEM, and transmission electron microscopy (TEM). The non-electrolytic nature of the Mino/Mnnovel complex was confirmed based on the molar conductance value. The novel Mino/Mn complex was tested using the ORAC assay and evaluated for its antibacterial activity against the following strains: Escherichia coli (ATCC 8739), Bacillus subtilis (ATCC 6633), Staphylococcus aureus (ATCC 6538), and Klebsiella pneumonia (ATCC 13883). ResultsSpectral data showed that Mino is coordinated with Mn(II) through the oxygen atoms of ketonic (CO) and hydroxyl groups. The magnetic moment value confirms the octahedral configuration of the complex. Surface morphology observed via SEM confirmed that the Mino/Mn novel complex appeared as small rectangular projections. TEM showed the formation of black spots for Mn(II) chelate with particle sizes ranging from 9 to 23 nm. The current findings confirmed the high antibacterial activity of the Mino/Mn complex against the four mentioned strains of bacteria at extremely low concentrations: 0.625 mg/ml for E. coli, 0.009 for B. subtilis, and 0.625 for S. aureus. The Mino/Mn complex exhibited potent antioxidant activity by capturing and scavenging free radicals resulting from antibiotic misuse. ConclusionTherefore, it can be concluded that the novel formula of the Mino/Mn complex is an effective antioxidant and antibacterial agent with expected high potentially significant biological effects.

Investigation of Nosocomial Urinary Tract Infections Post Transplantation, Main Pathogens, and Sensitivity Tests

Background: Regarding end-stage organ disease, transplantation is recommended as the best therapeutic management. After organ transplantation, the incidence of nosocomial urinary tract infections (NUTIs) due to multidrug-resistant Gram-negative bacilli increases. Aim: The study aimed to investigate NUTIs post-transplantation, the main pathogens involved, and sensitivity tests conducted in a tertiary hospital in Isfahan, Iran. Methods: A retrospective survey on patients admitted to a tertiary hospital in Isfahan (Alzahra), Iran, was performed between 27 March, 2017, and 9 February, 2022. The information recorded included the date of infection, date of hospitalization, gender, age, type of pathogens, and resistance or sensitivity to antibiotics. Results: 73 kidney transplant recipients (61% females) with a mean age of 43. 2 ± 15.1 years were included. Within this population involving both genders, the main pathogens involved in NUTIs were as follows: Escherichia coli (30%), Klebsiella pneumonia (19%), Candida albicans and non-albicans (14%), Enterococcus faecalis (12%), Enterobacteriaceae (8%), Pseudomonas aeruginosa (6%), Staphylococcus spp. (6%), Acinetobacter baumannii (4%), and Streptococcus spp. (4%). Antibiotic susceptibility testing showed the most sensitivity of isolates against amikacin (n=29; 66%), meropenem (n= 28; 64%), piperacillin/tazobactam (n=26; 54%), cefepime (n= 25; 40%), ceftazidime (n= 27; 30%), ciprofloxacin (n= 40; 18%), and co-trimoxazole (n= 29; 10%). Conclusion: Escherichia coli, Klebsiella pneumonia, and Candida spp. were the major causes of NUTIs within the studied organ-transplanted recipients. Amikacin, meropenem, and piperacillin/ tazobactam have shown more than 50% sensitivity against isolates. Further evidence-based pharmacotherapy investigations associated with the different spectrum antibiotics and overall antimicrobial success rate is recommended to be advantageous.

Synthesis, DFT investigation, molecular docking analysis, ADMET studies, and biological evaluation of a novel series of imidazolidinone derivatives as potential antimicrobial agents

In this study, we constructed twenty novel imidazolidinone derivatives via the reaction of 2-(methylthio)-3,5-dihydro-4H-imidazol-4-one derivatives (1a-c) with some active methylene reagents and nitrogen nucleophiles. The synthesized compounds were confirmed through spectral analysis such as 1H NMR, 13C NMR, FT-IR, and MS. Moreover, the synthesized compounds were optimized and utilizing the DFT/B3LYP/6-31(G) basis set to investigate their energies and the presence of two forms of isomers (E and Z). The results confirmed the stability of the E form. ADMET of new imidazolidinones was also studied to investigate their lipophilicity and Lipinski's rule for determination of their physiological biological analysis. Also, the antimicrobial activity of new compounds on Escherichia coli, Klebsiella pneumonia, Staphylococcus aureus, Streptococcus mutans, Candida albicans, and Aspergillus Nigar using the inhibition zone technique were evaluated. The results demonstrate that compound 11c showed higher activity rather than other compounds due to the presence of piperazine moiety out of the plane of the benzene ring. Additionally, the docking study showed an electrostatic bonding interaction of the hydrogen of 11c and the amino acids of two proteins such as PDBID: 3t88 and 2wje.

Antibacterial chitosan/organic rectorite nanocomposite-conjugated gelatin/β-cyclodextrin hydrogels with improved hemostasis performance for wound repair

Bacterial infections and severe bleeding continue to pose significant challenges in wound repair. There is an urgent need for innovative, nature-inspired hydrogel dressings with antibacterial and hemostatic properties. A Ge-β-CD-CS-OREC conjugate hydrogel was developed by grafting β-CD and CS-OREC nanocomposites into a Ge matrix using EDC/NHS crosslinking, as confirmed by FT-IR and EDX analyses. Compared to single Ge-β-CD cross-linked hydrogels, the addition of CS-OREC enhanced the hydrogel's properties, including increased pore size (60 ± 14 μm), improved wettability (WCA = 28.82 ± 0.6°), enhanced tensile strength (41.3 ± 3.56 KPa), and strong tissue adhesion. Furthermore, this hydrogel demonstrated excellent cytocompatibility when co-cultured with keratinocytes (Kcs) and vascular endothelial cells (VECs). The incorporation of CS chains into OREC interlayers allowed the hydrogel to specifically target bacteria and increase membrane permeability in Pseudomonas aeruginosa (PA), Klebsiella pneumoniae (KP), and Staphylococcus aureus (SA), effectively reducing the bacterial load in infected wounds by 50.24–73.92 % compared to controls in vivo. Further, the hydrogel exhibited superior hemostatic efficiency (78 ± 10 s) over commercial gauze and other gels by enhancing platelet activation and coagulation factor secretion. The hydrogel accelerated tissue regeneration by promoting epithelial maturation and blood vessel regeneration, indicating its clinical potential as promising wound dressing.

Green synthesis of silver nanoparticles from supercritical CO2 mediated Lagerstroemia speciosa extract: Characterization, antimicrobial and antibiofilm activity

In the current study, optimal supercritical fluid extract (SFE) of Lagerstroemia speciosa (LS) leaves at pressure 29.59 megapascal (MPa), temperature 89.50 ºC and extraction time 53.85 min. was used to extract phenolic compounds for the synthesis of silver nanoparticles (AgNPs). The synthesis was studied for 0-20 hrs. Initially the synthesis of nanoparticles (SFELS-AgNPs) was confirmed using UV -spectroscopy. It demonstrated a maximum surface plasmon resonance at 430 nm. The crystallite dimension of nanoparticles was determined using X-ray diffraction (XRD) (13.47 nm), Transmission electron microscopy (TEM), zeta potential analysis and energy-dispersive X-ray analysis (EDAX) were used to analyze the morphology, surface charge and presence of differential elements in SFELS-AgNPs respectively. Developed nanoparticles revealed antimicrobial activity against two gram-positive viz. Staphylococcus aureus and Bacillus cereus, and three gram-negative bacteria viz. Klebsiella pneumonia, Pseudomonas aeruginosa and Escherichia coli. The nanoparticle showed a minimum inhibitory concentration (MIC) of 64 μg/ml whereas the minimum bactericidal concentration (MBC) 128 μg/ml against K. pneumonia. They significantly inhibited K. pneumonia biofilm formation which was confirmed using scanning electron microscopy (SEM). The results were encouraging compared to the standards drug Chloramphenicol and other controls. The generated nanoparticles have highly effective antimicrobial properties against pathogenic bacteria.

Characterization of a Novel Sequence Type (ST) 6758 Klebsiella Pneumoniae and the Role of IncX3 Plasmid in the Transmission of blaNDM

Characterization of a Novel Sequence Type (ST) 6758 Klebsiella Pneumoniae and the Role of IncX3 Plasmid in the Transmission of blaNDM

Synthesis and Evaluation of Novel Ternary MgFe2O4/CuO/TiO2 Nanocomposite for Visible Light Photodegradation of Malachite Green Dye

Novel ternary MgFe2O4/CuO/TiO2 nanocomposite was synthesized using the sol-gel method at low temperatures. The XRD, FTIR, SEM-EDX, TEM, UV-visible DRS and VSM techniques were used to characterize the structure, shape, optical, morphology and magnetic properties. The XRD examination revealed typical peaks in nanocomposites, including the anatase phase of TiO2 with an average diameter of 9 nm, consistent with the TEM data. The SEM morphology examinations revealed spherical particles, while EDAX analysis indicated the corresponding components (Fe, Ti, O, Mg and Cu) in the prepared nanocomposites. The UV-DRS measurements revealed that the synthesized nanocomposite has a band-gap energy of 2.30 eV. The vibrating sample magnetometer (VSM) was used to trace the M-H loop of MgFe2O4, yielding magnetic parameters such as saturation magnetization (Ms). The catalytic activity of the as-prepared sample was examined by the degradation of malachite green dye under visible light and UV irradiations. The photocatalytic studies demonstrated that MgFe2O4/CuO/TiO2 nanocomposite showed 100% degradation efficiency towards malachite green dye. Under visible light and UV irradiations, the synthesized MgFe2O4/CuO/TiO2 sample with a molar ratio of 0.8:0.1:0.1 demonstrated good catalytic efficiency. The antibacterial activity investigations were done against Gram-negative Escherichia coli, Klebsiella pneumonia, Gram-positive Staphylococcus aureus and Bacillus subtilis bacteria utilizing nanocomposites.

Molecular Diagnosis of Vaginal Microbiota Associated with Spontaneous Abortion in Women

Spontaneous abortion (SA) is a sever disease in which a women losses her foetus usually before 24 weeks of the pregnancy. About 10% -50% of pregnancy cases are run out with SA for reasons related with women's age and health. This condition occurrence may increases if the patient has a history of bacterial vaginosis. This study aimed at the characterization and isolation of vaginal microbiota generally and highlight on commensal bacteria becoming opportunistic when circumstances are favourable. From October to December 2022, about 100 samples were collected, 50 specimens from women with SA and 50 specimens from healthy pregnant outcomes (control). The high vaginal swabs samples were collected from Babylon Teaching Hospital for Maternity and Children and Imam Sadiq Teaching Hospital in Babylon, Iraq. To culture the samples, they were transported by media swab to laboratory. The culture of bacteria was done on 4 types of agar media: UTI chromogenic agar, MRS agar, MacConkey agar and blood agar. The first identification of bacteria was based on phenotypic traits of colonies, using manual biochemical tests and gram stain. Finally, the diagnosis was confirmed genetically by extracting bacterial genomic DNA for 20 of bacterial isolates under study and using PCR technique for 16S rRNA Loci gene and sequencing. The current study results showed difference in bacterial genera in women with SA compared with healthy women. It was also noted that embroilment of Enterococcus faecalis occurred in most cases of SA with an estimated percentage of 56% (28/50), thus defeating Escherichia coli by 32% (16/50) and 4% (2/50) for Klebsiella pneumonia and 4% (2/50) for Enterococcus gallinarum. In this study, some very rare bacteria species were identified including Acinetobacter junii at 2% (1/50) and Corynebacterium coyleae at 2% (1/50). While the percentage of bacteria associated with healthy women was: 30% (15/50) for E. faecalis, 26% (13/50) for E. coli, 18% (9/50) for K. pneumonia, 24% (12/50) for Staphylococcus epidermidis, and 2% (1/50) for Metabacillus niabensis (which was diagnosed for the first time in Iraq as well as the rest of the world in a clinical sample).

Effects of different carbapenemase and siderophore production on cefiderocol susceptibility in Klebsiella pneumoniae.

The resistance mechanism of Gram-negative bacteria to the siderophore antibiotic cefiderocol is primarily attributed to carbapenemase and siderophore uptake pathways; however, specific factors and their relationships remain to be fully elucidated. Here, we constructed cefiderocol-resistant Klebsiella pneumoniae (CRKP) strains carrying different carbapenemases and knocked out siderophore genes to investigate the roles of various carbapenemases and siderophores in the development of cefiderocol resistance. Antimicrobial susceptibility testing revealed that both blaNDM and blaKPC significantly increased the minimum inhibitory concentration (MIC) of Klebsiella pneumoniae (KP) to cefiderocol, while blaOXA-48 showed a modest increase. Notably, KP expressing NDM exhibited a higher cefiderocol MIC compared to KP expressing KPC, although expression of NDM alone did not induce cefiderocol resistance. Laboratory evolutionary experiments demonstrated that combining pNDM with mutations in the siderophore uptake receptor gene cirA and pKPC with a mutation in the two-component system gene envZ led to KP reaching a high level of cefiderocol resistance. Although combining pOXA with mutations in the two-component system gene baeS did not induce cefiderocol resistance, it significantly reduced susceptibility. Moreover, siderophores could influence the development of cefiderocol resistance. Strains deficient in enterobactin exhibited increased susceptibility to cefiderocol, while deficiencies in yersiniabactin and salmochelin showed no significant alterations. In conclusion, carbapenemase gene expression facilitates cefiderocol resistance, but its presence alone is insufficient. Cefiderocol resistance in CRKP typically involves abnormal expression of certain genes and other factors, such as mutations in siderophore uptake receptor genes and two-component system genes. The enterobactin siderophore synthesis gene entB may also contribute to resistance.

Integrating genomic and molecular data to predict antimicrobial minimum inhibitory concentration in Klebsiella pneumoniae

Minimum inhibitory concentration (MIC) denotes the in vitro benchmark indicating the quantity of antibiotic required to inhibit proliferation of specific bacterial strains. Determining MIC values corresponding to the infecting bacterial strain is paramount for tailoring appropriate antibiotic therapy. In the interim between specimen collection and laboratory-derived MIC outcomes, clinicians frequently resort to empirical therapy informed by retrospective analyses. Here introduces two deep learning approaches, a Convolutional Neural Network (CNN)-based model and an Enformer-based model, integrating genomic data of Klebsiella Pneumoniae and molecular structural data of 20 antibiotics to anticipate the MIC value of the bacterium for each antibiotic under consideration. These models demonstrate enhanced raw accuracy over the existing state-of-the-art model, which rely exclusively on genomic data. The CNN-based model achieves a notable 20% increase in raw accuracy while further mirroring the 1-tier accuracy of the state-of-the-art model. Although the Enformer-based model does not quite reach the performance levels of the CNN-based model, it offers an advantage by eliminating the need for arbitrary data processing steps. This streamlining of the data processing pipeline facilitates fast updates and improves the model interpretability. It is expected that these deep learning paradigms can significantly inform and bolster clinician decision-making during the empirical treatment phase.

PHYTOCHEMICAL SCREENING, ANTIMICROBIAL AND ANTI-OXIDANT ACTIVITIES OF SALVADORA PERSICA AND CALOTROPIS GIGANTEA EXTRACTS AGAINST SELECTED PATHOGENS

Multiple diseases are treated using medicinal plants nowadays. Salvadora persica and Calotropis Gigantea are beneficial herbs for traditional herbal medicine. The aim of the study was to Screen phytochemicals, antibacterial and antioxidant properties of Salvadora persica and Calotropis Gigantea against Staph. Aureus, Pseudomonas aeruginosa, Escherichia coli, and Salmonella typhimurium. Methods: Phytochemicals of both Salvadora persica and Calotropis Gigantea were screened by GC-MS analyzer. Antibacterial and antioxidant activity of ethnolic and Methonolic extracts of screened phytochemicals was tested using Agar Well Diffusion and DPPH assay respectively. Salvadora persica leaf extracts (100g/ml) inhibited Staph. Aureus, Pseudomonas aeruginosa, Escherichia coli, and Salmonella typhimurium. Density was used to establish the minimal inhibitory concentration of Salvadora persica and Calotropis Gigantea extracts. Results: Both plant extracts were rich in over 250 detected chemicals via GC-MS analyzer, with 52.5% of these having antibacterial and antioxidant properties Salvadora persica extracts were characterized by 1, 8-Cineole polyphenols (45%) and cyclic ethylene mercaptole (55%), demonstrating antibacterial and antioxidant effects. Meanwhile, Calotropis Gigantea extracts contained major components Campestrol (69%) and β-tocopherol (4%). Salvadora persica and Calotropis Gigantea extracts exhibited inhibition against Pseudomonas aeruginosa at 3.12 mg/ml. Antioxidant activity, assessed via the DPPH test, revealed 35% activity with 200μl of Methanolic extracts. Both Salvadora persica and Calotropis Gigantea leaf extracts exhibited antibacterial activity against Salmonella typhimurium, Pseudomonas aeruginosa, Staphylococcus aureus, and Escherichia coli. Notably, Calotropis Gigantea was effective against all chosen pathogens, while Salvadora persica exclusively targeted Staphylococcus aureus. Although Calotropis Gigantea had fewer antioxidants compared to Salvadora persica, the latter's extracts held potential for mitigating oxidative stress, aging, and related disorders. Previous studies highlighted 1, 8-Cineole polyphenols (45%) and cyclic ethylene mercaptole (55%) as antibacterial and antifungal agents against Klebsiella pneumonia and Aspergillus nigar. Conclusion: These findings underscore the promising applications of Salvadora persica and Calotropis Gigantea extracts in both antimicrobial and antioxidant interventions. And can be effected against different diseases such as Typhoid, skin diseases, and disease caused by Escherichia coli and staphylococcus aureus. Further exploration of their specific mechanisms of action and potential therapeutic applications of different metabolites and chemical compounds are warranted to harness the benefits offered by these natural extracts.

Antimicrobial activity of blue mold (Penicillium italicum) Filtrates against some species of pathogenic bacteria

Background: Penicillium saprophytic species, which primarily consume organic biodegradable materials, is a common example of a fungal species. The preparation filtrates of Penicillium italicum, a saprophyte on citrus fruits frequently linked to post-harvest diseases in this crop, were included in the current investigation. Objective: This investigation aimed determine the most efficient culture medium for the production of antibacterial secondary metabolites. Patients and Methods: included identifying the growth medium for P. italicum and produce its metabolites through the use of gas chromatography-mass spectrometry (GC MS) for both solid-state fermentation filtrate (SSFF) and liquid fermentation filtrate (LFF). Additionally, the antimicrobial activity of the mold filtrate against certain pathogenic bacteria was assessed using the agar well diffusion method. Results: indicated that the biomass used for mold growth was heavier in SSFF than LFF, and according to the findings, the selective active isolate's crude filtrate from two duplicates of the P. italicum Yeast Extract Sucrose YES culture medium was 0.063 mg, while the crude extract from rotten orange (as a solid medium) containing P. italicum was 0.11 mg. Tetracosane and other substances with a track record of therapeutic activity were found in the two mold extracts, according to GC MS data. Overall, both SSFF and LFF demonstrated antibacterial activity against Klebsiella pneumonia, Escherichia coli, Acinetobacter baumannii, Pseudomonas aeruginosa and Staphylococcus aureus, with the inhibition zones± standard deviation (IZ± SD) being 24.7± 0.57, 18.2± 0.28, 26.3± 0.59, 21.6± 0.51, and 32.8± 0.21 (for SSFF) mm and 0.0, 12.3±0.57, 28.16±0.20, 19.3±1.15, and 28±0.2 (for LFF) mm, respectively. Conclusion: the filtrate of P. italicum from a natural medium (rotted orange) as a solid state fermentation was more weighted and gave many effective metabolites compared to what was produced by liquid fermentation on a synthetic medium, and both liquid and solid fermentation filtrates demonstrated efficacy against harmful bacteria.

An investigation on the structural, morphological, optical, and antibacterial activity of Sr:CuS nanostructures

The aim of the present study is to synthesize Cu1−xSrxS (x = 0.00, 0.025, 0.05, 0.075, and 0.1) nanoparticles (NPs) using an easy chemical co-precipitation method in an efficient, inexpensive, and simple technique. The structural, morphological, and optical properties of the prepared samples were investigated using XRD, TEM, XRF, UV–Vis DRS, and PL characterization techniques. XRD spectra confirmed the Sr-doped copper sulfide nanoparticles have a hexagonal structure with crystallite sizes ranging from 15.15 to 16.04 nm, and, by XRF, the presence of the dopant was detected. TEM analysis confirmed that strontium ions had an effect on the shape of the CuS nanostructure, and the particle size increased from 16.27 to 17.32 nm after doping. A study using UV-Vis showed the presence of Sr doping increased the optical energy band gap (1.38 eV to 1.59 eV). At room temperature, one photoluminescence (PL) band was found at 826 nm. The antibacterial activity of CuS nanostructures against E. coli, P. aeruginosa, Klebsiella pneumonia, and S. aureus was evaluated by zone of inhibition. Sr doped CuS NPs exhibited the highest antibacterial activity against S. aureus (17 to 29 mm). Also, the results demonstrated that samples doped with 5, 7.5, and 10% Sr exhibited inhibitory effects against all the tested microbial strains higher than the antibiotic.

Biochemical Role of Folic Acid On Experimentally Induced Pulmonary Toxicity by klebsiella pneumonia in Rats

Biochemical Role of Folic Acid On Experimentally Induced Pulmonary Toxicity by klebsiella pneumonia in Rats