Infaunal Community Research Articles

Small-scale removal of seagrass (Zostera marina L.): effects on the infaunal community

ABSTRACTEelgrass meadows are a common feature in shallow waters along the Norwegian coast, where they provide a habitat for a diverse infaunal community. Recreational boat anchoring and moorings physically scour seagrass and may affect the ecosystem functioning and resilience of the system to natural and anthropogenic disturbances. A small-scale eelgrass (Zostera marina) removal experiment was conducted to study the effects on macro- and meiofauna. Entire plants, including the rhizomes, were removed from 4 m2 patches in three eelgrass meadows in the inner Oslofjord in October 2010. Core samples were taken after a recovery period of 10 months, from the removed patches as well as from the surrounding meadow. Macrofauna (>500 μm) and meiofauna (63–500 μm) in the sediment were investigated for possible effects of the eelgrass removal. Macrofauna and meiofauna composition were site specific and therefore location was identified as the main determinant for the infaunal community. The eelgrass did not regrow within the recovery period and bare sediment patches with only single eelgrass shoots were present during the sampling. Our analyses support an influence of the removal on individual species, but not the complete community. In particular one species, the gastropod Peringia ulvae, was encountered in higher numbers in samples from the removed patches than in control samples. From a management perspective, such minor removal of eelgrass, on the scale of square metres, appears to have no long-lasting detrimental effect to the infaunal community in sheltered meadows with muddy sediments.

Predicting the Composition of Polychaete Assemblages in the Aegean Coast of Turkey

Benthic infaunal species and communities have been extensively used to evaluate quality of the marine environment. Within the MSFD, community composition is addressed most commonly through Descriptor 6 (Seafloor integrity), criterion 6.2 (Condition of benthic communities). At the same time, the Directive has stipulations for addressing and assessing indicators linked with pressures in an explicitly spatial manner. At larger scales, achieving this through point sampling may be impractical or unfeasible; hence predictive methods are being increasingly employed to produce the large scale spatial data that are often required for marine spatial planning and management. The aim of the current work was to develop statistical and spatial modelling tools that can predict the distribution of soft-sediment benthic polychaetes in the Aegean coast of Turkey. To do that, we employed Species Archetype Models (SAMs), a novel analytical and modelling framework which uses mixture models to cluster species responses to the environment, producing a number of “archetypal” responses assumed to represent species with similar ecological/physiological tolerances. Polychaete presence/absence data were obtained from the literature and modelling was performed against environmental variables reflecting the main natural and anthropogenic gradients in the region. The resulting models are interpreted in light of the sensitivity/tolerance classification scheme for benthic invertebrates. Three Species Archetypes were identified through the analysis. In brief, Species Archetype 1 consists of the most prevalent species in the dataset and primarily follows the salinity and temperature gradients. Species Archetype 2, present in the central and southern Aegean, is dominated by sensitive and indifferent species and responds negatively to chlorophyll a, whereas Species Archetype 3 represents mostly tolerant and opportunistic polychaetes with increased probability of occurrence in eutrophic, shallow, inshore areas throughout the region. Predictive performance was constrained by the information contained in our data. These results from a limited data set show promise that SAMs as a modelling tool can offer valuable insights into patterns of benthic species distribution and coexistence and increase our capacity to provide predictive advice.

Simulated leakage of high pCO2 water negatively impacts bivalve dominated infaunal communities from the Western Baltic Sea.

Carbon capture and storage is promoted as a mitigation method counteracting the increase of atmospheric CO2 levels. However, at this stage, environmental consequences of potential CO2 leakage from sub-seabed storage sites are still largely unknown. In a 3-month-long mesocosm experiment, this study assessed the impact of elevated pCO2 levels (1,500 to 24,400 μatm) on Cerastoderma edule dominated benthic communities from the Baltic Sea. Mortality of C. edule was significantly increased in the highest treatment (24,400 μatm) and exceeded 50%. Furthermore, mortality of small size classes (0–1 cm) was significantly increased in treatment levels ≥6,600 μatm. First signs of external shell dissolution became visible at ≥1,500 μatm, holes were observed at >6,600 μatm. C. edule body condition decreased significantly at all treatment levels (1,500–24,400 μatm). Dominant meiofauna taxa remained unaffected in abundance. Densities of calcifying meiofauna taxa (i.e. Gastropoda and Ostracoda) decreased in high CO2 treatments (>6,600 μatm), while the non - calcifying Gastrotricha significantly increased in abundance at 24,400 μatm. In addition, microbial community composition was altered at the highest pCO2 level. We conclude that strong CO2 leakage can alter benthic infauna community composition at multiple trophic levels, likely due to high mortality of the dominant macrofauna species C. edule.

Density of Key-Species Determines Efficiency of Macroalgae Detritus Uptake by Intertidal Benthic Communities.

Accumulating evidence shows that increased biodiversity has a positive effect on ecosystem functioning, but the mechanisms that underpin this positive relationship are contentious. Complete extinctions of regional species pools are comparatively rare whereas compositional changes and reductions in abundance and biomass are common, although seldom the focus of biodiversity-ecosystem functioning studies. We use natural, small-scale patchiness in the density of two species of large bivalves with contrasting feeding modes (the suspension-feeding Austrovenus stutchburyi and deposit-feeding Macomona liliana) to examine their influence on the uptake of nitrogen from macroalgae detritus (i.e. measure of ecosystem function and food web efficiency) by other infauna in a 10-d laboratory isotope-tracer experiment. We predicted that densities of these key bivalve species and functional group diversity (calculated as Shannons H, a density-independent measure of community composition) of the intact infaunal community will be critical factors explaining variance in macroalgal per capita uptake rates by the community members and hence determine total uptake by the community. Results show that only two species, M. liliana and a large orbiniid polychaete (Scoloplos cylindrifer) dominated macroalgal nitrogen taken up by the whole community due to their large biomass. However, their densities were mostly not important or negatively influenced per capita uptake by other species. Instead, the density of a head-down deposit-feeder (the capitellid Heteromastus filiformis), scavengers (mainly nemertines and nereids) and species and functional group diversity, best explained per capita uptake rates in community members. Our results demonstrate the importance of species identity, density and large body size for ecosystem functioning and highlight the complex interactions underlying loss of ecological functions with declining biodiversity and compositional changes.

Physical and Biological Alterations Following Dredging in Two Beach Nourishment Borrow Areas in South Carolina's Coastal Zone

ABSTRACT Crowe, S.E.; Bergquist, D.C.; Sanger, D.M., and Van Dolah, R.F., 2016. Physical and biological alterations following dredging in two beach nourishment borrow areas in South Carolina's coastal zone. Dredging of nearshore subtidal sand deposits as a source for beach fill is a common practice in the SE United States, but the long-term effects of this practice on benthic environments are not well documented. Two borrow areas used to nourish the shoreface of Folly Beach, South Carolina, in 2005 (borrow area A) and 2007 (borrow area B) were sampled for sediment characteristics (silt and clay, calcium carbonate, total organic matter content, and sand phi size) and macrobenthic infaunal community composition using a before–after, control–impact design over periods of 8 and 6 years postdredging, respectively. Following dredging, surficial sediment characteristics within both borrow pits shifted toward finer materials and showed little evidence of recovering 8 and 6 years after impact. Changes in the benth...

Impacts of bottom fishing on the sediment infaunal community and biogeochemistry of cohesive and non-cohesive sediments

Bottom-trawl fisheries are wide-spread and have large effects on benthic ecosystems.We investigate the effect of scallop dredging on sand and otter trawling on mud by measuring changes in the infaunal community and the biogeochemical processes which they mediate. We hypothesize that changes in biogeochemistry due to fishing will be larger in mud where macrofauna-mediated processes are expected to play a greater role, than in sand where hydrodynamics mediate the redox system. We sampled benthic infauna, sediment pore-water nutrients, oxygen, chlorophyll a (Chl a), apparent redox potential discontinuity layer, organic carbon and nitrogen content over a gradient of fishing intensity in sand and mud. The effects of fishing on biogeochemistry were stronger on mud than on sand, where biogeochemistry appeared to be more strongly influenced by tidal currents and waves. On mud, trawling increased sediment-surface Chl a and ammonium concentration beyond 5 cm depth, but decreased ammonium and silicate concentration in the upper sediment layers. The effects of fauna and bioturbation potential on biogeochemistry were very limited in both mud and sand habitats. Our results suggests that otter trawling may be affecting organic-matter remineralization and nutrient cycling through sediment resuspension and burial of organic matter to depth rather than through the loss of bioturbation potential of the benthic community. In conclusion, our hypothesis that the effects of trawling on biogeochemistry are larger in mud is supported, but the hypothesis that these effects are mediated by changes in the infauna is not supported. These results imply that management of trawling on muddy sediments should have higher priority.

Macroinfaunal Communities on mud Volcanoes in the Gulf of Cádiz (NE Atlantic): Preliminary Results

This study was carried out from a series of samples obtained from the diapiric mud volcano system of the Guadalquivir River (Gulf of Cadiz) during the ARSA 0307 campaign. Five stations were sampled over depths ranging between 490 and 717 m. The main objective of this study is to provide a preliminary description of the infaunal communities living in these environments, reaching the taxonomic rank of family. As a result of this study we conclude that the polychaetes were the most abundant faunistic group in all stations sampled, accounting for more than 50 % of the total infaunal abundance. Following in abundance were crustaceans, dominated by amphipods and the group called “others.” Molluscs and echinoderms are the infauna with the lowest abundance values. After a multivariate analysis, no defined groupings were found between the different stations.

Submerged vegetation complexity modifies benthic infauna communities: the hidden role of the belowground system

AbstractMarine plants provide a variety of functions with high economic and ecological values in ecosystems. The above‐ (AG) and below‐ground (BG) systems increase the structural complexity of plants, which also enhance faunal abundance and diversity. The ecological role of the AG compartment in structuring inter‐tidal macrobenthic communities has been widely studied; however, this is not the case for the BG compartment. This study addressed the effects of variation in vegetation complexity (in both AG and BG systems) on associated macrobenthic infauna with respect to abundance, species richness, composition, weight and body type. To achieve this aim, a field experiment using artificial vegetation mimics was carried out using replicated treatments with different AG‐BG complexity ratios. We found a significant increase in the density and the number of taxa of macrobenthic infaunal species in plots with vegetation mimics compared with unvegetated areas, regardless of either AG or BG complexity. This effect was found even when AG parts were not present (i.e. when only BG parts were used). Furthermore, a positive relationship between structural complexity and diversity was recorded. Variation in one or both plant compartments was strongly related to diversity changes in the associated macrobenthic infauna. In conclusion, our experimental set‐up provides the first evidence that the BG compartment is at least as important as the AG compartment in controlling diversity in inter‐tidal vegetated areas because it was able to strongly affect community structure even when the AG system was totally absent.

Contribution of non-native species to soft-sediment marine community structure of San Francisco Bay, California

While non-native species (NIS) are important components in many coastal bays and estuaries, quantitative measures that characterize their effects on community structure at bay-wide scales are rare. In this study, we measure species composition and abundance for soft-sediments to assess the contribution of NIS to multiple dimensions of community structure, focusing on one of the most highly invaded bays in the world, San Francisco Bay. Benthic macrofauna was sampled in the high salinity, muddy shallow subtidal (2 m depth) across 10 sites, using replicate 0.1 m2 Van Veen grabs. Invertebrates retained on a 1 mm sieve were identified, counted, and used to estimate the overall contribution of NIS to (a) abundance (b) species richness, and (c) community similarity. Soft-sediment communities were dominated numerically by NIS, which accounted for 76 % of all organisms detected and had a mean bay-wide abundance that was three and half-fold higher than native biota. Overall, NIS contributed to 36 % of observed taxa and 24–29 % of total estimated regional diversity. Native species accounted for 21 % of total abundance and 45 % of total species richness. Compared to native species, NIS occurred more frequently among samples and also explained more of the variation in community structure among sites. NIS dominate several key attributes of the soft-sediment infaunal community in San Francisco Bay. Percent contribution of NIS to species richness was at least two-fold higher than reported from two decades ago. Unique to this bay, these measures establish a quantitative baseline on the state of invasions and provide an important model for evaluating the extent of NIS in estuaries. Application of this approach across estuaries, with repeated measures over time, is critically needed to advance scientific understanding of invasions and also evaluation of efficacy and gaps in management to reduce new invasions.

Relative Importance of Biotic and Abiotic Forces on the Composition and Dynamics of a Soft-Sediment Intertidal Community.

Top-down, bottom-up, middle-out and abiotic factors are usually viewed as main forces structuring biological communities, although assessment of their relative importance, in a single study, is rarely done. We quantified, using multivariate methods, associations between abiotic and biotic (top-down, bottom-up and middle-out) variables and infaunal population/community variation on intertidal mudflats in the Bay of Fundy, Canada, over two years. Our analysis indicated that spatial structural factors like site and plot accounted for most of the community and population variation. Although we observed a significant relationship between the community/populations and the biotic and abiotic variables, most were of minor importance relative to the structural factors. We suggest that community and population structure were relatively uncoupled from the structuring influences of biotic and abiotic factors in this system because of high concentrations of resources that sustain high densities of infauna and limit exploitative competition. Furthermore, we hypothesize that the infaunal community primarily reflects stochastic spatial events, namely a “first come, first served” process.

Rosselia socialis from the Ordovician of Asturias (Northern Spain) and the Early Evolution of Equilibrium Behavior in Polychaetes

ABSTRACTStacked specimens of Rosselia socialis from the Middle to Upper Ordovician Castro Formation of Asturias, northern Spain represent an example of an infaunal community able to move upwards simultaneously to avoid burial due to sedimentation from unidirectional currents. This ichnofabric is similar to those described from younger deposits and attributed to equilibrium structures produced by polychaetes belonging to the Order Terebellida. Although high density of specimens has been documented in Cambrian Rosselia suites, the Ordovician occurrence from Asturias is so far the oldest example of a Rosselia ichnofabric recording synchronous equilibrium behaviour of a whole community. Despite uncertainties derived from their patchy fossil record and potential for behavioral convergence, trace-fossil evidence seems to indicate that some groups of polychaetes were efficient burrowers since the early Cambrian. Rosselia ichnofabrics reflect an increased complexity of the trophic web and the ability of infaunal polychaete communities to colonize sandy, relatively high-energy settings by the early Paleozoic.

Infaunal macrobenthos in the Porcupine Bank (NE Atlantic)

Infaunal macrobenthos in the Porcupine Bank (NE Atlantic)

Comparison between infaunal communities of the deep floor and edge of the Tonga Trench: Possible effects of differences in organic matter supply

Hadal trenches are characterised by environmental conditions not found in any other environment, thereby providing new opportunities to understand the processes that shape deep-sea benthic communities. Technological advances have led to an increase in the number of investigations in hadal trenches over the last two decades. However, more quantitative samples including the deepest parts of trenches is needed to better understand trends in benthic diversity, abundance, biomass and community structure in these extreme habitats, and how these may be shaped by environmental and/or evolutionary factors. In this study, we describe and compare the abundance, biomass, vertical distribution in the sediment, diversity, and community structure of nematodes and other infauna in sediments from the Horizon Deep (~10 800m) in the Tonga Trench and a site on the edge of the trench (~6250m). Mean nematode abundance was six times greater at the Horizon Deep site (387 ind. 10cm−2) than at the trench edge site (65 ind. 10cm−2). A similar pattern was observed for biomass (15 vs 2μgDW 10cm−2, respectively), which likely resulted from elevated organic matter supply at the Horizon Deep site. There was no significant difference in nematode species richness between the two sites, but diversity measured using rarefaction was significantly greater at the trench edge site than at the Horizon Deep site [ES(20); 13.8 vs 7.8]. Dominance was much more pronounced in the Horizon Deep, which may be due to competitive exclusion by a small number of opportunistic species. Nematode community structure differed significantly both between sites and among sediment depth layers. The presence of subsurface peaks in pigment concentrations, bacteria abundance, and nematode abundance at the Horizon Deep site is consistent with a recent turbidite event, and may also reflect high rates of bioturbation by larger fauna resulting from high food availability. Determining the relative influences of different environmental factors on hadal trench benthic communities will require further investigation based on quantitative samples encompassing the trench axis as well as the oceanic and continental slopes.

Infaunal Benthic Communities from the Inner Shelf off Southwestern Africa Are Characterised by Generalist Species.

Infaunal communities of benthic macro-organisms (≥ 1mm length) were studied from 81 samples collected across nine sites to the north and south of the Orange River in the Benguela upwelling ecosystem in 2003, with a view to describing communities and understanding the drivers of regional community structure, as well as to document diversity and to examine geographic affinities. Although the fauna was dominated by polychaetes and peracarid crustaceans, patterns in community structure could only weakly be explained by the measured environment (~35%). This is attributed to the generalist nature of the species recovered, which were widely distributed amongst different sediments, water-depths and latitudes. The fauna is dominated by species that enjoy a widespread regional and global distribution and is characterised by relatively low diversity, which is discussed.

Assessing functional redundancy in chronically trawled benthic communities

Fishing disturbance on ecosystems leads to changes in community structure and composition, which may have drastic implications for ecosystem functional performance. Functional redundancy, defined as species sharing similar functional roles, is a community property that plays an important role in preventing functional changes in ecosystems under pressure. In this study, we suggest that functional redundancy may be achieved through trait abundance (i.e. large amounts of a trait, hereafter “common traits”), or through trait richness (i.e. large numbers of distinct taxa exhibiting the same trait, hereafter “widespread traits”). We assessed the variability of both measures obtained from epifaunal and infaunal communities in soft-bottom trawling grounds. Sampling sites were located in four Mediterranean areas that were subjected to different levels of trawling effort. Common and widespread traits measures were based on the analysis of biological traits linked to key soft-bottoms functions such as nutrient cycling, bentho-pelagic coupling and habitat provision. The role of rare species in both measures was also assessed and we observed that, in our study sites, rare species generally exhibited the same traits as the most abundant species. Common and widespread traits measures provided complementary information on benthic functional redundancy. Thus, we suggest that a combination of the two measures should be used to appropriately assess benthic functional redundancy in trawling grounds. As redundancy is a component of ecosystem resilience, functional redundancy evaluation is important to assess the overall integrity of ecosystems.

The Effects of Sieve Size on Benthic Community Composition Analysis

Hartwell, S.I. and Fukuyama, A.K., 2015. The effects of sieve size on benthic community composition analysis.Sediment samples were collected from the deep portion of Kachemak Bay, Alaska, for chemical analysis, toxicity testing, and infaunal community assessment as part of a larger Cook Inlet project. The benthos samples were sieved through nested 1.0- and 0.5-mm screens to allow a comparison of the relative efficacy of the two techniques. The community was highly diverse at all sampled locations (Shannon-Weiner Index > 3). Abundance was dominated by a relatively small number of species. A significantly higher number of individuals and species were retained on the 0.5-mm screen. Sieving the benthic organisms with a 1.0-mm sieve introduced biases in the data relative to the 0.5-mm screen, including calculations such as diversity and other parameters such as feeding guild distributions and benthic indices. Using a 0.5-mm mesh sieve did increase sample analysis costs and resulted in a larger number of individual organisms that were not identified to species.

Accurate assessment of the impact of salmon farming on benthic sediment enrichment using foraminiferal metabarcoding

Assessing the environmental impact of salmon farms on benthic systems is traditionally undertaken using biotic indices derived from microscopic analyses of macrobenthic infaunal (MI) communities. In this study, we tested the applicability of using foraminiferal-specific high-throughput sequencing (HTS) metabarcoding for monitoring these habitats. Sediment samples and physico-chemical data were collected along an enrichment gradient radiating out from three Chinook salmon (Oncorhynchus tshawytscha) farms in New Zealand. HTS of environmental DNA and RNA (eDNA/eRNA) resulted in 1,875,300 sequences that clustered into 349 Operational Taxonomic Units. Strong correlations were observed among various biotic indices calculated from MI data and normalized fourth-root transformed HTS data. Correlations were stronger using eRNA compared to eDNA data. Quantile regression spline analyses identified 12 key foraminiferal taxa that have potential to be used as bioindicator species. This study demonstrates the huge potential for using this method for biomonitoring of fish-farming and other marine industrial activities.

Influence of sediment characteristics on the composition of soft-sediment intertidal communities in the northern Gulf of Mexico.

Benthic infaunal communities are important components of coastal ecosystems. Understanding the relationships between the structure of these communities and characteristics of the habitat in which they live is becoming progressively more important as coastal systems face increasing stress from anthropogenic impacts and changes in climate. To examine how sediment characteristics and infaunal community composition were related along the northern Gulf of Mexico coast, we sampled intertidal infaunal communities at seven sites covering common habitat types at a regional scale. Across 69 samples, the communities clustered into four distinct groups on the basis of faunal composition. Nearly 70% of the variation in the composition of the communities was explained by salinity, median grain size, and total organic content. Our results suggest that at a regional level coarse habitat characteristics are able to explain a large amount of the variation among sites in infaunal community structure. By examining the relationships between infaunal communities and their sedimentary habitats, we take a necessary first step that will allow the exploration of how changes in habitat and community composition influence higher trophic levels and ecosystem scale processes.

Modelling habitat range and seasonality of a new, non-indigenous polychaete Laonome sp. (Sabellida, Sabellidae) in Pärnu Bay, the north-eastern Baltic Sea

An as-yet-undescribed, non-indigenous polychaete species was found at very high densities in the eastern part of the Baltic Sea in Estonia in 2012. The species belongs to the sabellid genus Laonome Malmgren, 1866, but it could not be assigned to any of the previously described species. To date, the species has established a stable population after surviving a notably cold winter (2012/2013). To study the local distribution and abundance of the species, a spatial grid with some stations repeated seasonally and interannually was sampled in a quantitative manner. Based of the survey data and available environmental data, the variables that contributed significantly to explaining variation in the abundance of the polychaete were determined using the Boosted Regression Trees modelling approach. Molecular barcodes to characterize the identity of the species were also established. The abundance of Laonome sp. exhibited strong seasonal variation, peaking between July and November. Besides seasonality, the quantity of decomposed microalgae in the sediment and wave exposure best explained the variation in abundance. Laonome sp. is now well-established in the Baltic Sea and locally reached high densities in low salinity areas. This non-indigenous polychaete may potentially modify sediment morphology and chemistry and disrupt the natural infaunal communities. Laonome sp. could displace or even completely eliminate some species currently present in the study area and beyond if it spreads; however, it could also facilitate currently-present species through the provision of alternative substrate and/or food. Given its persistence and high abundance in Parnu Bay, colonization of other low-salinity areas of the Baltic Sea can be expected.

Habitat Heterogeneity Determining the Macrobenthic Infaunal Community in a Mangrove Swamp in South China: Implication for Plantation and Plant Invasion

ABSTRACT Leung, J.Y.S., 2015. Habitat heterogeneity determining the macrobenthic infaunal community in a mangrove swamp in South China: Implication for plantation and plant invasion. Mangroves have been severely disturbed by human exploitation over the last few decades, and mangrove plantation programs have been launched to restore degraded mangroves worldwide. However, mangrove plantations can change habitat heterogeneity, potentially altering the macrobenthic infaunal community, an important constituent in mangrove ecosystems. The Tai O mangrove swamp in Hong Kong was chosen as the study site for evaluation of the significance of habitat heterogeneity on the macrobenthic infaunal community by interpreting infaunal and environmental data through univariate and multivariate analyses. Infauna and sediment samples were collected by sediment cores in habitats with an increasing order of habitat heterogeneity (mudflat < seedling < Kandelia < Kandelia with algal mats < pneumatophore). Compared with other areas...