Individual Giant Unilamellar Vesicles Research Articles

Sedimentation‐Based Confinement of Individual Giant Unilamellar Vesicles in Microchamber Arrays with a Dynamically Exchangeable Outer Medium

AbstractGiant unilamellar vesicles (GUVs) are an ideal model to study cellular membrane functions in vitro, yet difficult to manipulate due to their fragile nature, especially when subjected to dynamic change of their external microenvironment. Here, an original microfluidic concept is introduced for constraint‐free confinement of individual GUVs in microchambers with a dynamically exchangeable outer medium. GUVs self‐confine in an array of laterally separated microchambers by sedimentation, avoiding any mechanical constraint while allowing diffusion‐based exchange of the outer medium via a microfluidic channel and time‐resolved microscopy observation. The geometric and flow parameters optimizing medium exchange while preventing GUV from lifting out are numerically established. Different aqueous solutions separated by air plugs can be flowed into the channel by taking advantage of a polydimethylsiloxane‐based hydrophilic channel wall. The possibility to manipulate microliter sample volumes for in situ observation of protein cell‐free expression is also exploited. It is found that the membrane‐targeting sequence of Bacillus subtilis MinD binds to GUVs and induces extensive membrane tubulation. This technically simple method offers a robust way to confine GUVs and dynamically control their outer medium, thus constituting an ideal platform to study the spatio‐temporal response of reconstituted membranes and/or synthetic cell studies subjected to dynamic micro‐environments.

Secondary Ion Mass Spectrometry of Single Giant Unilamellar Vesicles Reveals Compositional Variability.

Giant unilamellar vesicles (GUVs) are a widely used model system to interrogate lipid phase behavior, study biomembrane mechanics, reconstitute membrane proteins, and provide a chassis for synthetic cells. It is generally assumed that the composition of individual GUVs is the same as the nominal stock composition; however, there may be significant compositional variability between individual GUVs. Although this compositional heterogeneity likely impacts phase behavior, the function and incorporation of membrane proteins, and the encapsulation of biochemical reactions, it has yet to be directly quantified. To assess heterogeneity, we use secondary ion mass spectrometry (SIMS) to probe the composition of individual GUVs using non-perturbing isotopic labels. Both 13C- and 2H-labeled lipids are incorporated into a ternary mixture, which is then used to produce GUVs via gentle hydration or electroformation. Simultaneous detection of seven different ion species via SIMS allows for the concentration of 13C- and 2H-labeled lipids in single GUVs to be quantified using calibration curves, which correlate ion intensity to composition. Additionally, the relative concentration of 13C- and 2H-labeled lipids is assessed for each GUV via the ion ratio 2H-/13C-, which is highly sensitive to compositional differences between individual GUVs and circumvents the need for calibration by using standards. Both quantification methods suggest that gentle hydration produces GUVs with greater compositional variability than those formed by electroformation. However, both gentle hydration and electroformation display standard deviations in composition (n = 30 GUVs) on the order of 1-4 mol %, consistent with variability seen in previous indirect measurements.

Examining compositional variability of giant unilamellar vesicles via secondary ion mass spectrometry.

Giant unilamellar vesicles (GUVs) are a widely used model system to interrogate lipid phase behavior, study biomembrane mechanics, reconstitute membrane proteins, and provide a chassis for synthetic cells. However, there may be significant compositional variability between individual GUVs, either due to lipid sorting during film hydration or from vesicle budding following GUV formation. Although this compositional heterogeneity likely impacts phase behavior, the function and incorporation of membrane proteins, and the encapsulation of biochemical reactions, it has yet to be directly quantified. To assess heterogeneity, we use secondary ion mass spectrometry (SIMS) to probe the composition of individual GUVs using non-perturbing isotopic labels. Both 13C- and 2H-labeled lipids are incorporated into a ternary POPC/DSPC/CHOL mixture, which is then used to produce GUVs via gentle hydration or electroformation. Simultaneous detection of seven different ion species via SIMS allows for the concentration of 13C- and 2H-labeled lipids in a single GUVs to be quantified using calibration curves, which correlate ion intensity to composition. Additionally, the relative concentration of 13C- and 2H-labeled lipids is assessed for each GUV via the ion ratio 2H−/13C−, which is highly sensitive to compositional changes between individual GUVs and circumvents the need for calibration using standards. Both quantification methods suggest that gentle hydration produces GUVs with greater compositional variability than those formed by electroformation. However, both gentle hydration and electroformation display compositional variability on the order of several mole percent.

Biomimetic asymmetric bacterial membranes incorporating lipopolysaccharides

Gram-negative bacteria are equipped with a cell wall that contains a complex matrix of lipids, proteins, and glycans, which form a rigid layer protecting bacteria from the environment. Major components of this outer membrane are the high-molecular weight and amphiphilic lipopolysaccharides (LPSs). They form the extracellular part of a heterobilayer with phospholipids. Understanding LPS properties within the outer membrane is therefore important to develop new antimicrobial strategies. Model systems, such as giant unilamellar vesicles (GUVs), provide a suitable platform for exploring membrane properties and interactions. However, LPS molecules contain large polysaccharide parts that confer high water solubility, which makes LPS incorporation in artificial membranes difficult; this hindrance is exacerbated for LPS with long polysaccharide chains, i.e., the smooth LPS. Here, a novel emulsification step of the inverted emulsion method is introduced to incorporate LPS in the outer or the inner leaflet of GUVs, exclusively. We developed an approach to determine the LPS content on individual GUVs and quantify membrane asymmetry. The asymmetric membranes with outer leaflet LPS show incorporations of 1–16 mol % smooth LPS (corresponding to 16–79 wt %), while vesicles with inner leaflet LPS reach coverages of 2–7 mol % smooth LPS (28–60 wt %). Diffusion coefficient measurements in the obtained GUVs showed that increasing LPS concentrations in the membranes resulted in decreased diffusivity.

Physics of Organelle Membrane Bridging via Cytosolic Tethers is Distinct From Cell Adhesion

Tremendous progress has been made recently in imaging the contacts between intra-cellular organelles, which are thought to be mediated by soluble tethers. However, they are still difficult to study in cellulo, and reconstituting them in vitro is a standing challenge. Here we take a mimetic approach to study Giant unilamellar vesicles (GUVs) and supported lipid bilayers (SLBs) interacting via single- (or double-) stranded DNA sequences of two different lengths. Like intra-cellular tethers which may reside in the cytosol when unbound, the DNA-tethers are soluble, but can insert into the membrane with the help of cholesterol moieties found at their extremities. Tether-exchange between the bulk “cytosol” and the GUV/SLB membrane leads to a novel statistical ensemble in which the entire system equilibrates together, rather than individual GUVs behaving as separate closed systems. As a consequence, adhesion between the GUV and the SLB is driven by collective entropic effects amplified by tether shape changes associated with membrane bridging. A direct experimental consequence is an unusual dependence on tether-concentration, which becomes an important control parameter at low concentrations, while tether length/flexibility are less important. The establishment of this fundamentally different interaction between two membranes suggests that in physiological conditions, the regulation of contact formation inside cells may be very different from the case of the much studied ligand-receptor mediated cell adhesion.

Controlled Peptide-Mediated Vesicle Fusion Assessed by Simultaneous Dual-Colour Time-Lapsed Fluorescence Microscopy

We have employed a model system, inspired by SNARE proteins, to facilitate membrane fusion between Giant Unilamellar Vesicles (GUVs) and Large Unilamellar Vesicles (LUVs) under physiological conditions. In this system, two synthetic lipopeptide constructs comprising the coiled-coil heterodimer-forming peptides K4, (KIAALKE)4, or E4, (EIAALEK)4, a PEG spacer of variable length, and a cholesterol moiety to anchor the peptides into the liposome membrane replace the natural SNARE proteins. GUVs are functionalized with one of the lipopeptide constructs and the fusion process is triggered by adding LUVs bearing the complementary lipopeptide. Dual-colour time lapse fluorescence microscopy was used to visualize lipid- and content-mixing. Using conventional confocal microscopy, lipid mixing was observed on the lipid bilayer of individual GUVs. In addition to lipid-mixing, content-mixing assays showed a low efficiency due to clustering of K4-functionalized LUVs on the GUVs target membranes. We showed that, through the use of the non-ionic surfactant Tween 20, content-mixing between GUVs and LUVs could be improved, meaning this system has the potential to be employed for drug delivery in biological systems.

Programmed magnetic manipulation of vesicles into spatially coded prototissue architectures arrays

In nature, cells self-assemble into spatially coded tissular configurations to execute higher-order biological functions as a collective. This mechanism has stimulated the recent trend in synthetic biology to construct tissue-like assemblies from protocell entities, with the aim to understand the evolution mechanism of multicellular mechanisms, create smart materials or devices, and engineer tissue-like biomedical implant. However, the formation of spatially coded and communicating micro-architectures from large quantity of protocell entities, especially for lipid vesicle-based systems that mostly resemble cells, is still challenging. Herein, we magnetically assemble giant unilamellar vesicles (GUVs) or cells into various microstructures with spatially coded configurations and spatialized cascade biochemical reactions using a stainless steel mesh. GUVs in these tissue-like aggregates exhibit uncustomary osmotic stability that cannot be achieved by individual GUVs suspensions. This work provides a versatile and cost-effective strategy to form robust tissue-mimics and indicates a possible superiority of protocell colonies to individual protocells.

Raman Spectroscopy Study of Curvature-Mediated Lipid Packing and Sorting in Single Lipid Vesicles

Cellular plasma membrane deformability and stability is important in a range of biological processes. Changes in local curvature of the membrane affect the lateral movement of lipids, affecting the biophysical properties of the membrane. An integrated holographic optical tweezers and Raman microscope was used to investigate the effect of curvature gradients induced by optically stretching individual giant unilamellar vesicles (GUVs) on lipid packing and lateral segregation of cholesterol in the bilayer. The spatially resolved Raman analysis enabled detection of induced phase separation and changes in lipid ordering in individual GUVs. Using deuterated cholesterol, the changes in lipid ordering and phase separation were linked to lateral sorting of cholesterol in the stretched GUVs. Stretching the GUVs in the range of elongation factors 1–1.3 led to an overall decrease in cholesterol concentration at the edges compared to the center of stretched GUVs. The Raman spectroscopy results were consistent with a model of the bilayer accounting for cholesterol sorting in both bilayer leaflets, with a compositional asymmetry of 0.63 ± 0.04 in favor of the outer leaflet. The results demonstrate the potential of the integrated holographic optical tweezers-Raman technique to induce deformations to individual lipid vesicles and to simultaneously provide quantitative and spatially resolved molecular information. Future studies can extend to include more realistic models of cell membranes and potentially live cells.

Controlled and Tunable Loading and Release of Vesicles by Using Gigahertz Acoustics.

Controllable exchange of molecules between the interior and the external environment of vesicles is critical in drug delivery and micro/nano‐reactors. While many approaches exist to trigger release from vesicles, controlled loading remains a challenge. Herein, we show that gigahertz acoustic streaming generated by a nanoelectromechanical resonator can control the loading and release of cargo into and from vesicles. Polymer‐shelled vesicles showed loading and release of molecules both in solution and on a solid substrate. We observed deformation of individual giant unilamellar vesicles and propose that the shear stress generated by gigahertz acoustic streaming induces the formation of transient nanopores, with diameters on the order of 100 nm, in the vesicle membranes. This provides a non‐invasive method to control material exchange across membranes of different types of vesicles, which could allow site‐specific release of therapeutics and controlled loading into cells, as well as tunable microreactors.

Controlled and Tunable Loading and Release of Vesicles by Using Gigahertz Acoustics

AbstractControllable exchange of molecules between the interior and the external environment of vesicles is critical in drug delivery and micro/nano‐reactors. While many approaches exist to trigger release from vesicles, controlled loading remains a challenge. Herein, we show that gigahertz acoustic streaming generated by a nanoelectromechanical resonator can control the loading and release of cargo into and from vesicles. Polymer‐shelled vesicles showed loading and release of molecules both in solution and on a solid substrate. We observed deformation of individual giant unilamellar vesicles and propose that the shear stress generated by gigahertz acoustic streaming induces the formation of transient nanopores, with diameters on the order of 100 nm, in the vesicle membranes. This provides a non‐invasive method to control material exchange across membranes of different types of vesicles, which could allow site‐specific release of therapeutics and controlled loading into cells, as well as tunable microreactors.

Protein-Free Membrane Fusion Probed by Single Giant Unilamellar Vesicle Imaging - the Role of Membrane Charge

Membrane fusion is a ubiquitous process in biology. The outcome of fusion is followed by successive steps of fusion intermediates, including (i) protein tethering in apposing bilayers, (ii) membrane adhesion, (ii) hemifusion and eventually (iv) full fusion, the latter leading to complete mixing of membranes and aqueous contents. Studying membrane fusion in vivo is, however, very challenging. By a combination of microscopic approaches, we investigate the role of membrane charges on the interaction and fusion of cationic large (DOTAP:DOPE:DPPE-Rh - 1:1:0.1 mol) and individual giant unilamellar vesicles (LUVs-GUVs) in a pure lipid system. Fluorescencence Resonance Energy Transfer (FRET) efficiency, in which the donor is reconstituted in the GUVs and the acceptor incorporated upon membrane merging, is measured and directly related to fusion efficiency. LUVs stably adhere and diffuse onto the surface of neutral (POPC) GUVs with minimal membrane merging (FRET efficiency 0.1). In sharp contrast, very efficient fusion occurs with the negative GUV membranes (POPC:POPG - 1:1) - FRET 0.6-1. An increase in membrane area after contact with the fusogenic LUVs was clearly detected for this composition. Excess of negative lipids on GUVs (pure POPG) relative to positive charges decrease fusion efficiency (FRET 0.3) - a charge-neutralization process. Transferred lipids upon fusion undergo similar diffusion to those on GUV membranes (∼ 1 μm2/s) With the developed LUV-GUV system, we studied the charge-dependent membrane adhesion and fusion separately and individually for the very same interacting partners, not possible with traditional in vitro systems. The system could also be easily adapted to protein-reconstituted studies.Financial support: FAPESP.

Visualization and Quantification of Transmembrane Ion Transport into Giant Unilamellar Vesicles

AbstractTransmembrane ion transporters (ionophores) are widely investigated as supramolecular agents with potential for biological activity. Tests are usually performed in synthetic membranes that are assembled into large unilamellar vesicles (LUVs). However transport must be followed through bulk properties of the vesicle suspension, because LUVs are too small for individual study. An alternative approach is described whereby ion transport can be revealed and quantified through direct observation. The method employs giant unilamellar vesicles (GUVs), which are 20–60 μm in diameter and readily imaged by light microscopy. This allows characterization of individual GUVs containing transporter molecules, followed by studies of transport through fluorescence emission from encapsulated indicators. The method provides new levels of certainty and relevance, given that the GUVs are similar in size to living cells. It has been demonstrated using a highly active anion carrier, and should aid the development of compounds for treating channelopathies such as cystic fibrosis.

Trapping and release of giant unilamellar vesicles in microfluidic wells.

We describe the trapping and release of giant unilamellar vesicles (GUVs) in a thin and wide microfluidic channel, as they cross indentations etched in the channel ceiling. This trapping results from the reduction of the membrane elastic energy, which is stored in the GUV as it squeezes to enter into the thin channel. We demonstrate that GUVs whose diameter is slightly larger than the channel height can be trapped and that they can be untrapped by flowing the outer fluid beyond a critical velocity. GUVs smaller than the channel height flow undisturbed while those much larger cannot squeeze into the thin regions. Within the range that allows trapping, larger GUVs are anchored more strongly than smaller GUVs. The ability to trap vesicles provides optical access to the GUVs for extended periods of time; this allows the observation of recirculation flows on the surface of the GUVs, in the forward direction near the mid-plane of the channel and in the reverse direction elsewhere. We also obtain the shape of GUVs under different flow conditions through confocal microscopy. This geometric information is used to derive a mechanical model of the force balance that equates the viscous effects from the outer flow with the elastic effects based on the variation of the membrane stretching energy. This model yields good agreement with the experimental data when values of the stretching moduli are taken from the scientific literature. This microfluidic approach provides a new way of storing a large number of GUVs at specific locations, with or without the presence of an outer flow. As such, it constitutes a high-throughput alternative to micropipette manipulation of individual GUVs for chemical or biological applications.

Fluid domain patterns in free-standing membranes captured on a solid support

We devise a methodology to fixate and image dynamic fluid domain patterns of giant unilamellar vesicles (GUVs) at sub-optical length scales. Individual GUVs are rapidly transferred to a solid support forming planar bilayer patches. These are taken to represent a fixated state of the free standing membrane, where lateral domain structures are kinetically trapped. High-resolution images of domain patterns in the liquid-ordered (lo) and liquid-disordered (ld) co-existence region in the phase-diagram of ternary lipid mixtures are revealed by atomic force microscopy (AFM) scans of the patches. Macroscopic phase separation as known from fluorescence images is found, but with superimposed fluctuations in the form of nanoscale domains of the lo and ld phases. The size of the fluctuating domains increases as the composition approaches the critical point, but with the enhanced spatial resolution, such fluctuations are detected even deep in the coexistence region. Agreement between the area-fraction of domains in GUVs and the patches respectively, supports the assumption that the thermodynamic state of the membrane remains stable. The approach is not limited to specific lipid compositions, but could potentially help uncover lateral structures in highly complex membranes.

Automated analysis of giant unilamellar vesicles using circular Hough transformation

In order to obtain statistically relevant results, the study of membrane effects at the single-vesicle level requires the analysis of several hundreds of giant unilamellar vesicles (GUVs), which becomes a very time-consuming task if carried out manually. Complete and user-friendly software for fast and bias-free automated analysis has not been reported yet. We developed a framework for the automated detection, tracking and analysis of individual GUVs on digital microscopy images. Our tool is suited to quantify protein binding to membranes as well as several aspects of membrane permeabilization on single vesicles. We demonstrate the applicability of the approach by comparing alternative activation methods for Bax, a pore-forming protein involved in mitochondrial permeabilization during apoptosis. The complete software is implemented in MATLAB (The MathWorks, Inc., USA) and available as a standalone as well as the full source code at http://www.ifib.uni-tuebingen.de/research/garcia-saez/guv-software.html.

Partitioning of Oleic Acid into Phosphatidylcholine Membranes Is Amplified by Strain

Partitioning of fatty acids into phospholipid membranes is studied on giant unilamellar vesicles (GUVs) utilizing phase-contrast microscopy. With use of a micropipet, an individual GUV is transferred from a vesicle suspension in a mixed glucose/sucrose solution into an isomolar glycerol solution with a small amount of oleic acid added. Oleic acid molecules intercalate into the phospholipid membrane and thus increase the membrane area, while glycerol permeates into the vesicle interior and thus via osmotic inflation causes an increase of the vesicle volume. The conditions are chosen at which a vesicle swells as a sphere. At sufficiently low oleic acid concentrations, when the critical membrane strain is reached, the membrane bursts and part of vesicle content is ejected, upon which the membrane reseals and the swelling commences again. The radius of the vesicle before and after the burst is determined at different concentrations of oleic acid in suspension. The results of our experiments show that the oleic acid partitioning increases when the membrane strain is increased. The observed behavior is interpreted on the basis of a tension-dependent intercalation of oleic acid into the membrane.

A single copy of SecYEG is sufficient for preprotein translocation

The heterotrimeric SecYEG complex comprises a protein-conducting channel in the bacterial cytoplasmic membrane. SecYEG functions together with the motor protein SecA in preprotein translocation. Here, we have addressed the functional oligomeric state of SecYEG when actively engaged in preprotein translocation. We reconstituted functional SecYEG complexes labelled with fluorescent markers into giant unilamellar vesicles at a natively low density. Förster's resonance energy transfer and fluorescence (cross-) correlation spectroscopy with single-molecule sensitivity allowed for independent observations of the SecYEG and preprotein dynamics, as well as complex formation. In the presence of ATP and SecA up to 80% of the SecYEG complexes were loaded with a preprotein translocation intermediate. Neither the interaction with SecA nor preprotein translocation resulted in the formation of SecYEG oligomers, whereas such oligomers can be detected when enforced by crosslinking. These data imply that the SecYEG monomer is sufficient to form a functional translocon in the lipid membrane.

Methyl-β-Cyclodextrins Preferentially Remove Cholesterol from the Liquid Disordered Phase in Giant Unilamellar Vesicles

Methyl-β-cyclodextrins (MβCDs) are molecules that are extensively used to remove and to load cholesterol (Chol) from artificial and natural membranes; however, the mechanism of Chol extraction by MβCD from pure lipids or from complex mixtures is not fully understood. One of the outstanding questions in this field is the capability of MβCD to remove Chol from lipid domains having different packing. Here, we investigated the specificity of MβCD to remove Chol from coexisting macrodomains with different lipid packing. We used giant unilamellar vesicles (GUVs) made of 1,2-dioleoylphosphatidylcholine:1,2-dipalmitoylphatidylcholine:free cholesterol, 1:1:1 molar ratio at 27°C. Under these conditions, individual GUVs present Chol distributed into l o and l d phases. The two phases can be distinguished and visualized using Laurdan generalized polarization and two-photon excitation fluorescence microscopy. Our data indicate that MβCD removes Chol preferentially from the more disordered phase. The process of selective Chol removal is dependent on the MβCD concentration. At high concentrations, MβCD also removes phospholipids.

Kinetics of Membrane Permeabilization by Human Antimicrobial Peptide LL-37

The molecular mechanism of membrane permeabilization by antimicrobial peptides (AMPs) has been an active field of research. There are suggestions that different AMPs might act with different mechanisms. One example used to support this hypothesis is LL-37 which was found by two independent studies that the helical peptide adsorbs to the membrane with its helical axis parallel to the membrane. Base on this result, it was concluded that LL-37 does not form pores, unlike many well studied AMPs, such as magainin. We have recently found that this result was due to the impediment of peptide rotation in the multilayers, because LL-37 is longer than the membrane thickness. We have detected pores by LL-37 in swollen multilayers by neutron in-plane scattering and also found that the helices were oriented normal to the membrane, exactly like magainin. We would like to know if the pore formation by long helices may exhibit kinetic potential barriers. By observing individual giant unilamellar vesicles (GUVs), we found that the pores are stable and of finite size consistent with neutron measurement. However, sometimes the pores reduce their sizes in time, allowing only partial leakage of large dye molecules, while small dye molecules completely leaked out. Both the formation of the pores and change of pore size occur stochastically as if there are potential barriers for each type of event. We also used the method of aspiration to correlate the leakage with the change of aspiration protrusion length. The maximum protrusion length before pore formation depends on the peptide concentration, exhibiting yet another type of potential barrier.

Pores Formed by Bax α5 Relax to a Smaller Size and Keep at Equilibrium

Pores made by amphipathic cationic peptides (e.g., antimicrobials and fragments of pore-forming proteins) are typically studied by examining the kinetics of vesicle leakage after peptide addition or obtaining structural measurements in reconstituted peptide-lipid systems. In the first case, the pores have been considered transient phenomena that allow the relaxation of the peptide-membrane system. In the second, they correspond to equilibrium structures at minimum free energy. Here we reconcile both approaches by investigating the pore activity of the α5 fragment from the proapoptotic protein Bax (Bax α5) before and after equilibrium of peptide/vesicle complexes. Quenching assays on suspensions of large unilamellar vesicles suggest that in the presence of Bax α5, the vesicles maintain a leaky state for hours under equilibrium conditions. We proved and analyzed stable pores on single giant unilamellar vesicles (GUVs) in detail by monitoring the entrance of dyes added at different times after incubation with the peptide. When the GUVs came in contact with Bax α5, leakage started stochastically, was delayed for various periods of time, and in the majority of cases proceeded rapidly to completion. After hours in the presence of the peptide, the same individual GUVs that refilled completely at first instance maintained a porated state, which could be observed in subsequent leak-in events for serially added dyes. However, these long-term pores were smaller in size than the initial equilibration pores. Stable pores were also detected in GUVs made in the presence of Bax α5. The latter pores can be considered equilibrium states and may correspond to structures measured previously in bilayer stacks. Although pore formation may occur as a kinetic process, equilibrium pores may also be functionally relevant structures, especially in highly regulated systems such as the apoptotic mitochondrial pores induced by Bax.