Indian River Research Articles

Extreme Runoff of Chemical Species of Nitrogen and Phosphorus Threatens a Florida Barrier Island Lagoon

Extreme runoff of stormwater to poorly flushed barrier island lagoons often adds excess nitrogen (N) and phosphorus (P) that can promote subsequent, sometimes intense, harmful algal blooms (HABs). Successful management of such estuaries requires special appreciation of when and how to control concentrations and fluxes of chemical species of N and P during high flow. Toward that end, monthly surveys and episodic rain-event sampling were carried out from December 2015 to March 2018 for two contrasting tributaries of the Indian River Lagoon (IRL), a barrier island lagoon in Florida. One tributary, South Prong Saint Sebastian River, flows through predominantly agricultural, forested and open land, whereas the second tributary, Crane Creek, traverses mainly residential-commercial land. Concentrations of some N and P species in these tributaries increased with increased flow and could be described with statistically significant equations for concentration versus flow rate, thereby supporting flow-rate-dependent flux determinations. Drainage basin yields (fluxes per square km) varied with land cover/use. Calculated annual yields of dissolved organic N (DON) and dissolved inorganic P (DIP) averaged ∼70% greater for South Prong Saint Sebastian River from high flow through thicker, more organic- and P-rich soils. In contrast, yields of nitrate + nitrite were 100% higher for Crane Creek from widespread application of N-fertilizer to thin layers of turfgrass overlying sand, plus runoff of N-rich reclaimed water. Two major weather events highlighted our study and foreshadow impacts from climate change. Seven months of drought from November 2016 to May 2017 were followed in September-October 2017 by excess rain, runoff and flooding from Hurricane Irma. Consequently, >50% of freshwater fluxes and ∼60% of N and P fluxes from South Prong Saint Sebastian River, Crane Creek and other IRL tributaries occurred during 2 months in 2017. Lagoon-wide inputs provided enough bioavailable N and P to help support a nanoeukaryotic bloom for >5 months, with chlorophyll a values >50 μg L–1. The bloom was co-dominated by the brown tide alga, Aureoumbra lagunensis, and an unidentified nanoeukaryotic green alga. Decreased salinity, low concentrations of dissolved inorganic N and P, and decreasing dissolved organic P (DOP), combined with biological factors, diminished the IRL bloom by mid-2018.

Fatal Blowhole Obstruction by Eel in Common Bottlenose Dolphins (Tursiops truncatus) in Florida, USA.

Esophageal and pharyngeal obstruction are commonly reported in marine mammals, but asphyxiation from blowhole and nasal cavity obstruction has been reported only rarely: in two long-finned pilot whales (Globicephala melas), several harbor porpoises (Phocoena phocoena), and one common bottlenose dolphin (Tursiops truncatus). We describe two cases of blowhole obstruction and subsequent asphyxiation in bottlenose dolphins caused by eels. A whip eel (Bascanichthys scuticaris) was found obstructing the blowhole of a deceased dolphin from the Indian River Lagoon, Florida, US (2011) and a shrimp eel (Ophichthus gomesii) was found obstructing the blowhole of a deceased dolphin from Tampa Bay, Florida (2020). Normally, the respiratory and digestive tracts of cetaceans do not communicate. Consuming large or oddly shaped prey can result in laryngeal displacement and subsequent interaction between the two systems. It is likely the eels entered the oral cavity while the dolphins were consuming or playing with prey, and laryngeal displacement enabled the eels to slither into and become stuck in the nasal passage, causing asphyxiation. These novel findings underscore the importance of continued investigation into causes of mortality in stranded marine mammals and can contribute to the knowledge of feeding ecology in bottlenose dolphins. As changing environmental conditions contribute to shifts in prey availability and abundance, mortality due to prey-related asphyxiation could become more common in odontocetes.

Septic systems drive nutrient enrichment of groundwaters and eutrophication in the urbanized Indian River Lagoon, Florida

Effluent from septic systems can pollute groundwater and surface waters in coastal watersheds. These effects are unknown for the highly urbanized central Indian River Lagoon (CIRL), Florida, where septic systems represent > 50% of wastewater disposal. To better understand these impacts, water quality was assessed along both canals and a tributary that drain into the CIRL. Dissolved nutrient concentrations were higher near septic systems than in natural areas. δ15N values of groundwater (+7.2‰), surface water (+5.5‰), and macrophytes (+9.7‰) were within the range for wastewater (>+3‰), as were surface water concentrations of the artificial sweetener sucralose (100 to 1700 ng/L) and fecal indicator bacteria density. These results indicate that septic systems are promoting eutrophication in the CIRL by contributing nutrient pollution to surface water via groundwater. This study demonstrates the need to reduce reliance on septic systems in urbanized coastal communities to improve water quality and subsequently mitigate harmful algal blooms.

Genomics-Based Phylogenetic and Population Genetic Analysis of Global Samples Confirms Halophila johnsonii Eiseman as Halophila ovalis (R.Br.) Hook.f.

Halophila johnsonii is an endangered seagrass species that is restricted to the southeast coast of Florida, United States. Its taxonomic status has been called into question, in particular, given the close morphological and genetic similarity of H. johnsonii and the widely distributed and morphologically variable Halophila ovalis, which is largely restricted to the Indo-Pacific region. While a close relationship to H. ovalis is uncontroversial, it remains uncertain whether H. johnsonii represents a distinct lineage or is a recent introduction to the Florida region. Given the conservation status of H. johnsonii, distinguishing these alternatives has important implications for the management of the species and its habitat. Here, we develop molecular data sets for samples of H. johnsonii and H. ovalis including DNA sequences, genome-wide SNPs and microsatellites with the view to resolving the affinities of H. johnsonii with respect to the wider H. ovalis complex. Phylogenetic hypotheses based upon plastid (∼18000 bp) and low copy nuclear DNA (∼6500 bp) sequences derived from hybrid capture, along with 990 genome-wide ddRAD SNPs consistently resolved H. johnsonii within H. ovalis. Specifically, we found a close affinity between H. johnsonii and H. ovalis sampled from the east coast of Africa. In addition, Halophila specimens collected in Antigua, which are within the range of morphological variation typical for H. ovalis, are virtually identical to H. johnsonii and the East African H. ovalis samples based upon DNA sequence analyses and these group together using Bayesian clustering analyses of microsatellites and ddRAD SNPs. We conducted population genetic analyses using large number of H. johnsonii samples collected over a 17-year period. Genotypic data generated through microsatellites and ddRAD SNPs revealed genetic uniformity for all 132 H. johnsonii samples across the Indian River Lagoon, Florida, while samples of H. ovalis from Antigua shared the same genotype as H. johnsonii. We conclude that the lack of genetic diversity and the absence of sexual reproduction strongly indicates that the total range of H. johnsonii is actually one clone that is closely related to populations in Africa and Antigua and may be derived from a recent introduction from one of those regions.

Bivalve Feeding on the Brown Tide Aureoumbra lagunensis in a Shallow Coastal Environment

Brown tides formed by Aureoumbra lagunensis decrease light penetration in the water column and are often followed by hypoxic events that result in the loss of fish and shellfish. To understand the ability of bivalve filter feeders to control and prevent A. lagunensis blooms, we exposed eastern oysters (Crassostrea virginica), hooked mussels (Ischadium recurvum), and hard clams (Mercenaria mercenaria) to a naturally co-occurring brown tide in the Indian River Lagoon (IRL), Florida, United States. Bivalves were exposed in the laboratory to multiple concentrations (104 to 106 cells mL–1) of isotopically labeled (13C and 15N) A. lagunensis cells. The standard clearance rate (herein clearance rate) of each bivalve species was calculated using flow cytometry to quantify A. lagunensis cell removal. The highest clearance rates were at 104 cells mL–1, but values varied across bivalve species (2.16 ± 0.30, 3.03 ± 0.58, and 0.41 ± 0.12 L h–1 for C. virginica, I. recurvum, and M. mercenaria, respectively). Although clearance rates decreased with increasing bloom concentrations, bivalves were still consuming algal cells at all concentrations and were retaining and assimilating more cells at the highest concentrations, as revealed by δ13C and δ15N values. We highlight interspecific differences among bivalve species in the removal of A. lagunensis, supporting the importance of healthy and diverse filter feeding communities in estuaries, especially as threats of brown tides and other HABs are increasing in the Anthropocene.

Gene expression changes with tumor disease and leech parasitism in the juvenile green sea turtle skin transcriptome.

Emerging infectious diseases are a major threat to biodiversity in the 21st century. Fibropapillomatosis (FP) is an epithelial tumor disease that affects immature and adult marine turtles worldwide, particularly green turtles (Chelonia mydas). We know little about the host factors contributing to FP susceptibility, in part because transcriptomic studies that compare transcript expression in turtles with and without FP are lacking. Here, we performed RNA-Seq on healthy skin tissue from immature C. mydas in the Indian River Lagoon, Florida, USA, comparing turtles (1) with and without FP and (2) with and without leech parasites, a putative vector of FP. We assembled a de novo C. mydas skin transcriptome to identify transcripts with significant differential expression (DE) across FP and leech categories. Significant DE transcripts were found across FP and leech comparisons, including 10 of the same transcripts with DE across both comparisons. Leech-positive individuals significantly upregulated different immune and viral interaction transcripts than did leech-negative individuals, including viral interaction transcripts associated with herpesvirus interactions. This finding strengthens the role of marine leeches as mechanical vectors of Chelonid herpesvirus 5 (ChHV5) which has been implicated as a causative agent of FP. FP-positive turtles upregulated several tumor progression and suppression transcripts relative to FP-negative turtles, which had no significant DE tumor progression transcripts. FP-positive turtles also upregulated significantly more protein interaction transcripts than FP-negative turtles. DE transcripts across leech comparisons showed no functional enrichment, whereas DE transcripts across FP comparisons showed some GO terms were enriched in FP-positive and FP negative turtles. Notably, only FP-negative turtles were enriched for GO terms involved in acquired and inflammatory immune gene regulation. Overall, our DE transcripts included several candidate genes that may play important roles in C. mydas resistance to or recovery from FP, highlighting that transcriptomics provides a promising venue to understand this impactful disease. Continued investigation of C. mydas responses to FP and leech affliction is imperative for species persistence and the conservation of marine ecosystems worldwide due to the essential role of sea turtles in ecosystem function and stability.

Biogeochemical and Hydrological Drivers of Heterogeneous Nutrient Exports From Subterranean Estuaries

Submarine groundwater discharge (SGD) to coastal zones contributes terrestrial freshwater and nutrients that may support harmful algal blooms (HABs). The magnitude of nutrient exports via SGD depends on volumes of fresh groundwater discharge, its chemical composition, and modifications by biogeochemical processing within subterranean estuaries. Thus, the ability to upscale SGD exports requires knowing the range of chemical composition of inland groundwater and how those compositions may be transformed as fresh and saltwater mix within subterranean estuaries. These processes may create heterogeneous magnitudes of solute exports, even at small spatial scales, and such heterogeneities have rarely been assessed for regional or global SGD nutrient export estimates. To evaluate heterogeneity in subterranean estuary processes and nutrient export, we collected seasonal pore water samples in 2015–2016 at three proximal (<20 km) subterranean estuary sites in Indian River Lagoon, FL. Sites have homogenous hydrogeological settings, but differ in land use and coastal features, and include a mangrove site, an urban site, and a site offshore of a natural wetland. All sites exhibit little variation through time in nutrient concentrations and modeled SGD rates. In contrast, each site exhibits significantly different nutrient concentrations of potential fresh groundwater sources, fresh groundwater discharge volumes, and nutrient transformations within subterranean estuaries. Groundwater specific discharge correlates with nutrient concentrations, suggesting that higher residence times in the subterranean estuary increase biogeochemical transformations that reduce anthropogenic nutrient loads but increase in situ nutrient sources derived from organic matter remineralization. The differences in transformations lead to SGD nutrient contributions that differ by orders of magnitude between sites and have N:P ratios that are greater than the Redfield ratio (15) for the mangrove (29) and urban sites (28), but less than the Redfield ratio for the wetland site (8). These results indicate that heterogeneity of both absolute and relative nutrient export via SGD complicates integration of nutrient fluxes across regional coastal zones and evaluations of its impacts to coastal ecosystems. A better understanding of the drivers of heterogeneity, including subterranean estuary processes, land use, coastal topography, and vegetation dynamics could improve assessments of regional nutrient loading and upscaling for estimates of global solute cycles.

Cyclical Patterns and a Regime Shift in the Character of Phytoplankton Blooms in a Restricted Sub-Tropical Lagoon, Indian River Lagoon, Florida, United States

This paper examines the character of phytoplankton blooms in a restricted sub-tropical lagoon along the Atlantic coast of central Florida. The results of the 23-year study (1997–2020) provide evidence for multiple types of variability in bloom activity, including cyclical patterns, stochastic events, and most prominently a regime shift in composition and intensity. Cyclical patterns (e.g., El Niño/La Niña periods) and stochastic events (e.g., tropical storms) influenced rainfall levels, which in turn impacted nutrient concentrations in the water column and the timing and intensity of blooms. In 2011, a major change occurred in the character of blooms, with a dramatic increase in peak biomass levels of blooms and the appearance of new dominant taxa, including the brown tide speciesAureoumbra lagunensisand other nanoplanktonic species. Results of quantitative analyses reveal system behavior indicative of a regime shift. The shift coincided with widespread losses of seagrass community and reduced drift algae biomass. A combination of exceptionally low water temperatures in the winters of 2009/2010 and 2010/2011, hypersaline conditions associated with drought conditions, and high light attenuation caused by blooms appear to have contributed to the widespread and protracted decline in seagrass and drift macroalgal communities in the lagoon, leading to shifts in distribution of internal and external nutrient sources toward phytoplankton.

Multimodel assessment of water budget in Indian sub-continental river basins

Estimation of the water budget is essential for water resources and environmental management. However, a reliable assessment of the water budget and water yield for the Indian sub-continental river basins has been lacking. We used 0.25° gridded meteorological observations and five hydrological models to construct water budget estimates for the Indian sub-continental river basins for the 1951–2016 period. The hydrological models (i.e. VIC, CLM, Noah-MP, H08, and CWatM) were calibrated against observed streamflow and evaluated for evapotranspiration (ET) and soil moisture. Considerable uncertainty in the water budget components (ET and total runoff) was found due to the process representation and parameterization of hydrological models. Multimodel ensemble mean of the five hydrological models performed better than individual models for most basins for water budget components. West coast, Brahmaputra, and Brahmani are the three wettest river basins. At the same time, Sabarmati, Indus, and Pennar are the three driest basins in terms of mean annual precipitation in the Indian sub-continent. The three transboundary river basins (Brahmaputra, Ganga, and Indus) have the highest water yield of 731.9 (±50.2), 582.4 (±89.4), and 231.1(±71) km3, respectively. The Budyko framework showed that only two basins (West Coast and the Brahmaputra) over the Indian sub-continent fall under the energy-limited (relatively lower atmospheric water demands) conditions. In comparison, the other sixteen river basins are in water-limited (higher atmospheric water demands) condition. Our findings have implications for water resources planning and management in one of the world's most populated regions.

Growth performance, economic efficiency, meat quality, and gene expression in two broiler breeds fed different levels of tomato pomace.

Male broiler chicks (135 Indian River chicks (IR) and 135 Cobb chicks; n = 270) were weighed, wing banded, and distributed randomly into three iso-energetic and iso-nitrogenous diet groups for each breed (triplicate design, 45 bird/group, 15 bird/replicate). The chicks were fed the diets with levels of 0, 4, or 6% sun-dried tomato pomace (SDTP), respectively, for 42 consecutive days to determine the effect of consuming different levels of SDTP on growth performance, economic efficiency, meat quality, and gene expression in IR and Cobb broiler chickens. The inclusion of up to 6% SDTP in the diet of IR or Cobb chickens had no negative impact on growth performance parameters. Chickens from both the IR and Cobb breeds fed a diet containing 4% or 6% SDTP consumed more feed than those fed a diet containing 0% SDTP. Concomitantly, the groups fed a 6% SDTP diet of IR breed incurred a significantly higher feed cost, total variable cost (TVC), and total cost (TC). The inclusion of up to 6% SDTP in the feed of both breeds resulted in a non-significant increase in return parameters. The ultimate pH decreased as the SDTP concentration increased, with no significant differences in water holding capacity (WHC) or drip loss (48h). No alteration in the mRNA expression of hepatic growth hormone receptor gene (GHR) or insulin like growth factor-1 (IGF-1) was found among the treatments for either the IR or Cobb breeds. Thus, up to 6% SDTP can be added to the diet of IR and Cobb broiler chickens without any adverse effects on the examined parameters.

Hyperspectral optical absorption closure experiment in complex coastal waters

AbstractAccurate measurements of absorption data are required for the development and validation of inversion algorithms for upcoming hyperspectral ocean color imaging sensors, such as the NASA Phytoplankton, Aerosol, Cloud, and ocean Ecosystem mission. This study aims to provide uncertainty estimates associated with leading approaches to measure hyperspectral absorption coefficients in complex coastal waters. Absorption spectra were collected at 12 different stations, all located in the Indian River Lagoon, Florida, USA, between 09 January 2017 and 13 January 2017. Measurements included spectral absorption coefficients in the visible range (400–700 nm) associated with dissolved, aCDOM, total particulate, ap, and total nonwater, anw, fractions, and were made both in situ and from discrete samples. Discrete sample approaches included dual‐beam spectrophotometer, liquid waveguide capillary cell, point‐source integrating cavity absorption meter (PSICAM) for dissolved matter absorption samples, and quantitative filter technique ICAM measurements and the dual‐beam spectrophotometer with center‐mounted integrating sphere filter pad technique, while the Turner Designs ICAM, and WET Labs AC‐s, and AC‐9 instruments were used to determine absorption coefficients in situ. The Gershun approach, determining absorption from measurement of the irradiance quartet with respect to depth was also assessed in situ. Measurement uncertainties and relative accuracies were quantified for each of these approaches. Results showed generally strong agreements between different discrete sample methods, with average percent absolute error %δabs < 7% for aCDOM and < 9% for ap. In situ approaches showed higher variability and reduced accuracy. For anw, %δabs deviation relative to PSICAM data was on average 12% to 20%. Results help identify remaining technological gaps and need for improvements in the different absorption measurement approaches.

Entropy Based River Discharge Estimation Using One‐Point Velocity Measurement at 0.6D

AbstractEntropy theory applied to hydrometric measurements enables establishing a relationship between the maximum and the mean velocities of flow passing a river section. In many developing countries, river discharge is still estimated by the velocity‐area method following the procedure established based on the point‐velocities measured at 0.6D depth from the water surface of many verticals of flow section. This study explores the establishment of a relationship between the maximum point‐velocity estimated at 0.6D depth of the vertical located at or nearer to the deepest flow depth, and the maximum point‐velocity occurring somewhere along the same vertical which in turn can be linked to the sectional mean flow velocity based on the established entropy theory. The appropriateness of the proposed two‐steps based approach of discharge estimation is first verified on the Tiber River and the Po River of Italy. The study finds that the values of the maximum point‐velocity estimated using the proposed approach closely matches with the recorded maximum flow velocity values along the same flow‐depths. After this verification, the proposed method was applied for discharge estimation at two Indian river gauging stations, where only the point‐velocity measurements at 0.6D depth locations of the verticals are recorded. The study finds that the discharges estimated by both the proposed approach and the velocity‐area method closely match with each other with the estimated Nash‐Sutcliffe Efficiency (NSE) values greater than 0.99. Thus the proposed two‐steps approach involving the entropy concept based relationship for discharge estimation enables to replace the tedious and time‐consuming velocity‐area approach.

Grazing by the Copepod Parvocalanus crassirostris on Picochlorum sp. at Harmful Bloom Densities and the Role of Particle Size

Harmful blooms of nanophytoplankton (2–20 μm) are increasingly common and sometimes severe, but requirements and controls of such blooms (e.g., water quality constraints, requirements for nutrients, and the presence of different guilds of grazers) are poorly understood. Laboratory grazing experiments were conducted to evaluate the potential for top-down control by the copepod Parvocalanus crassirostris on a small harmful algal species (an unidentified chlorophyte Picochlorum, 1–4 μm) and to test the effects of cell sizes on grazing rates. The Picochlorum sp. is a strain isolated from a long-lasting harmful algal bloom in the Indian River Lagoon that reached high densities (>1 × 106 cells ml–1). Experiments contrasted grazing on Picochlorum sp. with grazing on the palatable prymnesiophyte Isochrysis galbana (4–6 μm) in monocultures and mixed cultures. When presented in monocultures, grazing rates on Picochlorum sp. were lower than grazing rates on the palatable alternative. When Picochlorum sp. were presented alongside I. galbana, copepods essentially ceased feeding on the former. In additional experiments, P. crassirostris were fed plastic beads with diameters of 2.0–17.9 μm to control for differences in taste, toxicity, production of mucilage and shape of potential food. Paracalanus crassirostris fed most efficiently on beads with diameters of 7.0–7.9 μm. Results revealed that P. crassirostris can consume Picochlorum sp., but small size and the presence of palatable cells reduces the likelihood of top-down control of blooms of Picochlorum sp.

Impacts of Supplementing Broiler Diets with Biological Curcumin, Zinc Nanoparticles and Bacillus licheniformis on Growth, Carcass Traits, Blood Indices, Meat Quality and Cecal Microbial Load.

Simple SummaryThe present study aimed to investigate the beneficial effects of zinc nanoparticles (ZnNPs) and curcumin nanoparticles (CurNPs) as well as Bacillus licheniformis (Bl) supplementation on broiler growth, chemical blood indices, and cecal microbes. The results showed considerable antimicrobial activity against pathogenic bacteria and fungi with ZnNPs and CurNPs supplementations. At the same time, ZnNPs, CurNPs, and Bl improved broiler performance, carcass traits, meat quality traits, and some blood indices. Therefore, the inclusion of ZnNPs, CurNPs, and Bl is recommended for broiler feeding regimens to improve the performance and health status.The current study aimed to investigate the influence of dietary zinc nanoparticles (ZnNPs), curcumin nanoparticles (CurNPs), and Bacillus licheniformis (Bl) on the growth, carcass, blood metabolites, and the count of some cecal microorganisms of Indian River (IR) broilers. Chicks were allotted into seven experimental groups: control group, 1st, 2nd and 3rd groups were given diets enriched with ZnNPs, CurNPs and Bl (3.0, 5.0 and 2.0 cm3/kg diet, respectively). The 4th, 5th and 6th groups were given diets supplemented with ZnNPs (3.0) + Bl (2.0) (ZP); ZnNPs (3.0) + CurNPs (5.0) (ZC) and ZnNPs (3.0) + CurNPs (5.0) + Bl (2.0) (ZCP) cm3/kg diet, respectively. The results revealed that ZnNPs and CurNPs exhibited a considerable antimicrobial activity against pathogenic bacteria and fungi. They also inhibited the growth of microbes in a range of 50–95 µg/mL. The diet supplemented with ZnNPs, CurNPs, and Bl increased the body weight compared to the control after five weeks of age. Additionally, values of daily feed intake increased in these groups; however, the feed conversion ratio decreased. All values of carcass traits were better than that of the control. The treatments led to decreased abdominal lipids compared to the control. The activity of liver enzymes and malondialdehyde (MDA) activity decreased in the treated groups. In a converse trend, the levels of oxidative enzymes, amylase, protease, lipase and immunoglobulin were higher than that of the control. Meat quality properties were improved and cecal microbial counts were decreased. In conclusion, the ZnNPs, CurNPs, and Bl improved the broiler’s weights, carcass traits, meat quality traits, as well as some blood indices and cecal microbial load. Therefore, the inclusion of ZnNPs, CurNPs, or Bl is recommended for broiler feeding regimens to improve the performance and health status.

Population dynamics of Indian river shad Gudusia chapra (Hamilton, 1822) using length frequency analysis for fisheries management in a floodplain wetland of Ganga River Basin, India

AbstractThe small‐scale fisheries sector plays very significant role in Indian fisheries. Fish life history parameters such as growth and morality are considered important factors for their conservation and management. Accordingly, the population parameters of a commercially important freshwater clupeid fish, Gudusia chapra (Hamilton, 1822) of Mathura beel, a tropical oxbow lake in West Bengal were investigated on the basis of primary data using a FiSAT‐II software package. A total of 2062 specimens of both sexes combined, exhibiting a length (TL) range 1.7–15.4 cm and a weight range of 1.14–35.69 g, were collected from different sites of the wetland during October 2017–September 2019. The growth parameters L∞, K and t0 of the species were 16.55 cm, 1.10/year and −0.02, respectively. The growth performance (ϕ) was 2.48. The estimated mortality rates Z, M and F were 2.72, 1.25 and 1.47/year, respectively. The current exploitation ratio (E) was estimated to be 0.54 based on the length‐converted catch curve. Analysis of the relative yield per recruit and relative biomass per recruit model indicated that the current E value is approaching an Emax value of 0.56. The maximum sustainable yield of this species was estimated to be 10.7 t, compared to the present annual yield of 11.5 t. For optimal fisheries management and a reduced risk of over exploitation, the current exploitation rate should be reduced by about 40% to achieve E0.5 as a target reference point. The information generated in the present study will facilitate optimal management of the resources for sustainable fisheries management and conservation of G. chapra.

Benthic Community Assessment of Commercial Oyster (Crassostrea virginica) Gear in Delaware Inland Bays

Oyster aquaculture is one of several methods for the restoration of Delaware Inland Bays; however, little is known about its potential impacts on the benthic community of the bays. In this study, water quality parameters were measured and polychaetes were collected from 24 sampling locations at Rehoboth, Indian River, and Little Assawoman Bays from July to October 2016 and 2017. We aimed to assess the impact of Eastern oyster farming under different stocking densities (50 and 250 oysters/gear) and distances away from the sites where the off-bottom gears are implemented (under gears, one meter, and five meters away). No significant impact was detected on polychaetes’ abundance and richness in regard to the presence of oyster gears. The number of polychaetes and species richness was significantly higher in Little Assawoman Bay in comparison to the Indian River and Rehoboth Bays. Results showed that the Ulva lactuca bloom that happened in 2016 could negatively impact the low abundance and richness observed in the polychaetes community. Similarly, the values of polychaetes abundance and species richness did not change significantly in samples that were taken far from the oyster gears. Dominant polychaetes families were Capitellidae and Glyceridae contributing to more than 70% of polychaetes’ number of individuals. Our results help to understand the role of oyster aquaculture in restoring the viability in the natural habitat of the Delaware Inland Bays.

Pocahontas and Settler Memory in the Appalachian West and South

Abstract This article utilizes the Pocahontas coalfields in West Virginia and the Indian River Farms Company settlement of Vero Beach Florida as case studies of settler memory. As late as the nineteenth century, setters considered these two very different, but connected, Southern spaces as frontiers. Settlers in both places constructed fantasies about Native peoples that focused primarily on the idea of the Native woman Pocahontas. These are imaginative creations that both attempt to create a settlement and to hearken back to fantasies of the past that never fully existed. With selective constructions of memory, both settlements chose Pocahontas because the name evoked a settler dream of the good Indian yielding to conquest, just as they sought a pliant and willing landscape that would yield mineral and agricultural riches. In fact, both places have longer and deeper Native histories that settler and booster histories have obfuscated and hidden in favor of more “romantic” national narratives such as the Pocahontas myth, in order to sell a place and a product.

SxtA4+ and sxtA4- Genotypes Occur Together within Natural Pyrodinium bahamense Sub-Populations from the Western Atlantic.

Saxitoxin (STX) is a secondary metabolite and potent neurotoxin produced by several genera of harmful algal bloom (HAB) marine dinoflagellates. The basis for variability in STX production within natural bloom populations is undefined as both toxic and non-toxic strains (of the same species) have been isolated from the same geographic locations. Pyrodinium bahamense is a STX-producing bioluminescent dinoflagellate that blooms along the east coast of Florida as well as the bioluminescent bays in Puerto Rico (PR), though no toxicity reports exist for PR populations. The core genes in the dinoflagellate STX biosynthetic pathway have been identified, and the sxtA4 gene is essential for toxin production. Using sxtA4 as a molecular proxy for the genetic capacity of STX production, we examined sxtA4+ and sxtA4- genotype frequency at the single cell level in P. bahamense populations from different locations in the Indian River Lagoon (IRL), FL, and Mosquito Bay (MB), a bioluminescent bay in PR. Multiplex PCR was performed on individual cells with Pyrodinium-specific primers targeting the 18S rRNA gene and sxtA4. The results reveal that within discrete natural populations of P. bahamense, both sxtA4+ and sxtA4- genotypes occur, and the sxtA4+ genotype dominates. In the IRL, the frequency of the sxtA4+ genotype ranged from ca. 80–100%. In MB, sxtA4+ genotype frequency ranged from ca 40–66%. To assess the extent of sxtA4 variation within individual cells, sxtA4 amplicons from single cells representative of the different sampling sites were cloned and sequenced. Overall, two variants were consistently obtained, one of which is likely a pseudogene based on alignment with cDNA sequences. These are the first data demonstrating the existence of both genotypes in natural P. bahamense sub-populations, as well as sxtA4 presence in P. bahamense from PR. These results provide insights on underlying genetic factors influencing the potential for toxin variability among natural sub-populations of HAB species and highlight the need to study the genetic diversity within HAB sub-populations at a fine level in order to identify the molecular mechanisms driving HAB evolution.

Estimation of total water storage changes in India

ABSTRACT Long-term droughts significantly impact surface and groundwater resources in India, however, observed changes in major river basins have not been well explored. Here we use Standardized Precipitation Index (SPI) and Standardized Precipitation Evapotranspiration Index (SPEI) at three different time scales (24, 48, and 60 months) to identify long-term droughts in India for the observed record of 1951–2015. Drought characteristics (extent, events, frequency, and intensity) are analyzed for different river basins in India. Increasing trend in the areal extent of droughts is observed in two methods with three time scales in the maximum area (63.66%) in India. We use the data from the Gravity Recovery and Climate Experiment (GRACE) to estimate the changes in the terrestrial water storage (TWS) during the period 2002–2015. We identify that major long-term droughts in India occurred from 1966 to 1969, 1972, 1986–1987, and 2002–2004. The all-India average TWS shows a negative trend from 2002 to 2015 with prominent decline in north Indian river basins and positive trend in south Indian river basins. SPI and SPEI at longer time scales are positively associated with TWS indicating the adverse impacts of droughts on surface and groundwater resources in such a populated region.

Abundance and demography of common bottlenose dolphins (Tursiops truncatus truncatus) in the Indian River Lagoon, Florida: A robust design capture-recapture analysis.

Common bottlenose dolphins (Tursiops truncatus truncatus) inhabiting the Indian River Lagoon (IRL) estuarine system along the east coast of Florida are impacted by anthropogenic activities and have had multiple unexplained mortality events. Given this, managers need precise estimates of demographic and abundance parameters. Mark-recapture photo-identification boat-based surveys following a Robust Design were used to estimate abundance, adult survival, and temporary emigration for the IRL estuarine system stock of bottlenose dolphins. Models allowed for temporary emigration and included a parameter (time since first capture) to assess evidence for transient individuals. Surveys (n = 135) were conducted along predetermined contour and transect lines throughout the entire IRL (2016–2017). The best fitting model allowed survival to differ for residents and transients and to vary by primary period, detection to vary by secondary session, and did not include temporary emigration. Dolphin abundance was estimated from 981 (95% CI: 882–1,090) in winter to 1,078 (95% CI: 968–1,201) in summer with a mean of 1,032 (95% CI: 969–1,098). Model averaged seasonal survival rate for marked residents was 0.85–1.00. Capture probability was 0.20 to 0.42 during secondary sessions and the transient rate was estimated as 0.06 to 0.07. This study is the first Robust Design mark-recapture survey to estimate abundance for IRL dolphins and provides population estimates to improve future survey design, as well as an example of data simulation to validate and optimize sampling design. Transients likely included individuals with home ranges extending north of the IRL requiring further assessment of stock delineation. Results were similar to prior abundance estimates from line-transect aerial surveys suggesting population stability over the last decade. These results will enable managers to evaluate the impact of fisheries-related takes and provide baseline demographic parameters for the IRL dolphin population which contends with anthropogenic impacts and repeated mortality events.