Background: Orthodontic treatments frequently involve tooth extractions to address crowding and protrusion, but the effects of these extractions on vertical skeletal changes are still debated. Research has extensively covered aspects like soft tissue response and smile aesthetics, yet there is no consensus on their impact on vertical dimensions. This issue is particularly pertinent for hyperdivergent individuals, who make up about 22% of orthodontic patients. A proposed technique for such cases includes counterclockwise rotation of the lower jaw and advancement of posterior teeth to manage open bites or excessive vertical facial height. This study aims to compare vertical skeletal changes in Class I malocclusion patients undergoing extraction versus non-extraction fixed orthodontic treatments. Material and Methods: We analysed pre- and post-treatment lateral cephalometric radiographs from 60 Class I crowding patients, evenly split into extraction and non-extraction groups. Eight vertical skeletal parameters were assessed and compared statistically between the two groups. Superimposition analysis of radiograph tracings was used to explore vertical changes related to molar mesialization, particularly in the extraction group. Results: The extraction group demonstrated significant reductions in vertical skeletal dimensions compared to the non-extraction group. Measurements including FMA, SN-GoGn, Y-axis, SN-PP, and PP-MP showed significant differences, with reductions in the extraction group (P = 0.001). Procrustes superimposition indicated effective molar mesialization in the extraction group, which was not observed in the non-extraction group. Conclusion: Extraction of first premolars in fixed orthodontic treatment leads to a notable decrease in vertical skeletal dimensions, in contrast to the slight increase seen with non-extraction treatments. This reduction is largely due to molar mesialization, which enhances vertical skeletal dimensions and treatment stability in Class I crowding cases.