Tursiops Aduncus Research Articles

Demographic History and Adaptive Evolution of Indo-Pacific Bottlenose Dolphins (Tursiops aduncus) in Western Australia.

Demographic processes can substantially affect a species' response to changing ecological conditions, necessitating the combined consideration of genetic responses to environmental variables and neutral genetic variation. Using a seascape genomics approach combined with population demographic modelling, we explored the interplay of demographic and environmental factors that shaped the current population structure in Indo-Pacific bottlenose dolphins (Tursiops aduncus) along the Western Australian coastline. We combined large-scale environmental data gathered via remote sensing with RADseq genomic data from 133 individuals at 19 sampling sites. Using population genetic and outlier detection analyses, we identified three distinct genetic clusters, coinciding with tropical, subtropical and temperate provincial bioregions. In contrast to previous studies, our demographic models indicated that populations occupying the paleo-shoreline split into two demographically independent lineages before the last glacial maximum (LGM). A subsequent split after the LGM 12-15 kya gave rise to the Shark Bay population, thereby creating the three currently observed clusters. Although multi-locus heterozygosity declined from north to south, dolphins from the southernmost cluster inhabiting temperate waters had higher heterozygosity in potentially adaptive loci compared to dolphins from subtropical and tropical waters. These findings suggest ongoing adaptation to cold-temperate waters in the southernmost cluster, possibly linked to distinct selective pressures between the different bioregions. Our study demonstrated that in the marine realm, without apparent physical boundaries, only a combined approach can fully elucidate the intricate environmental and genetic interactions shaping the evolutionary trajectory of marine mammals.

Establishment of the first dermal fibroblast cell line derived from the Indo-Pacific Bottlenose Dolphin (Tursiops aduncus) and its response to pollutant exposure

The Indo-Pacific bottlenose dolphin (Tursiops aduncus), classified as a new species since 1998, is underexplored in ecotoxicology owing to ethical constraints and the lack of specific in vitro models. Herein, we established the first skin fibroblast cell line (TaSF) from an Indo-Pacific bottlenose dolphin stranded along the Pearl River Estuary, China. TaSF cells exhibited strong proliferation in early passages but ceased mitosis at passage 19, likely owing to reaching the Hayflick limit. Morphology and immunofluorescence tests confirmed the fibroblastic nature of these cells. Karyotyping revealed 21 pairs of autosomes and 1 pair of sex chromosomes (XY), consistent with many cetaceans. To facilitate long-term future studies, TaSF cells were immortalized with exogenous simian virus 40 T antigen, creating the TaSFT cell line. The cytotoxic effects of 27 contaminants, including 6 organotins (OTs), 10 per- and polyfluoroalkyl substances (PFASs), and 11 phthalates (PAEs), on TaSFT cells were evaluated after 24-h exposure. Among these chemicals, OTs exhibited the strongest cytotoxicity, and both OTs and PFASs showed structure-related toxicity. These findings confirm the feasibility of TaSFT cells as a novel tool for ecotoxicity research on the Indo-Pacific bottlenose dolphin and highlight the need for further investigation into the environmental contaminant pressures on this species.

Dolphins, sharks, and barnacles: Use of photographs to examine intra- and inter-specific interactions in bottlenose dolphins in Mozambique.

Understanding interactions within and between species is crucial to ecological research. However, for cetaceans such interactions can be difficult to observe in the field. Photographs offer an opportunity to study intra- and inter-specific interactions, by capturing 'snapshots' of their occurrence over space and time. At-surface and underwater photographs of bottlenose dolphins (Tursiops aduncus) inhabiting Ponta do Ouro Partial Marine Reserve (PPMR), Mozambique, were used to examine evidence of interactions with other dolphins, predators and ectoparasites. Intra-specific scarring levels significantly differed by sex and age class, with males displaying more scarring than females. Similarly, adults had more scarring than juveniles or calves. Shark bites significantly differed in their distribution across dolphin body areas, with the dorsal side being more frequently wounded than the ventral side. The presence of barnacles was exclusive to fluke, dorsal and pectoral fins, and showed strong seasonal trends. Overall, this study demonstrates the value of photographs for examining marine ecological interactions. It provides the first insights regarding dolphin social behaviour, predation risk and health for this population. These in turn will support future research into the population dynamics and conservation of the PPMR dolphins, which is urgently required in the face of locally increasing anthropogenic pressures.

Juvenile social play predicts adult reproductive success in male bottlenose dolphins

For over a century, the evolution of animal play has sparked scientific curiosity. The prevalence of social play in juvenile mammals suggests that play is a beneficial behavior, potentially contributing to individual fitness. Yet evidence from wild animals supporting the long-hypothesized link between juvenile social play, adult behavior, and fitness remains limited. In Western Australia, adult male bottlenose dolphins ( Tursiops aduncus ) form multilevel alliances that are crucial for their reproductive success. A key adult mating behavior involves allied males using joint action to herd individual females. Juveniles of both sexes invest significant time in play that resembles adult herding—taking turns in mature male (actor) and female (receiver) roles. Using a 32-y dataset of individual-level association patterns, paternity success, and behavioral observations, we show that juvenile males with stronger social bonds are significantly more likely to engage in joint action when play-herding in actor roles. Juvenile males also monopolized the actor role and produced an adult male herding vocalization (“pops”) when playing with females. Notably, males who spent more time playing in the actor role as juveniles achieved more paternities as adults. These findings not only reveal that play behavior provides male dolphins with mating skill practice years before they sexually mature but also demonstrate in a wild animal population that juvenile social play predicts adult reproductive success.

In pop pursuit: social bond strength predicts vocal synchrony during cooperative mate guarding in bottlenose dolphins.

Vocal communication is an emblematic feature of group-living animals, used to share information and strengthen social bonds. Vocalizations are also used to coordinate group-level behaviours in many taxa, but little is known of the factors that may influence vocal behaviour during cooperative acts. Allied male Indo-Pacific bottlenose dolphins (Tursiops aduncus) use the 'pop' vocalization as a coercive signal when working together to herd single oestrous females. Using long-term association and acoustic data, we examined the influence of social and non-social factors on pop use by allied male dolphins in this context. Neither pop rate nor pop bout duration were influenced by any of the factors examined. However, allied males with stronger social bonds engaged in higher rates of vocal synchrony; whereby they actively matched the timing of their pop production. Hence, social bond strength influenced pop use in a cooperative context, suggesting dual functions of pop use: to induce the female to remain close, and to promote social bond maintenance and cooperation among males. This article is part of the theme issue 'The power of sound: unravelling how acoustic communication shapes group dynamics'.

Experiments with a set of cooperative enrichment devices used by groups of Indo-Pacific bottlenose dolphins

Dolphins in the wild cooperate to find food, gain and maintain access to mating partners, look after their young ones, or for the sheer joy of play. Under human care, environmental enrichments provide mental and physical stimulation and opportunities for the dolphins to practice their natural abilities. In this review, I focus on a set of enrichment devices we designed for cooperative problem-solving. They allowed the dolphins to utilize and improve their cognitive skills, leading to improved socialization within the group. While the devices provided appropriate challenges to the dolphins, they also allowed the investigation of the impact of demographic and social factors on the cooperative actions. We found that age and relatedness had no impact on cooperation; in turn, cooperation increased with group size. In addition, during the use of these cognitive enrichments, partner preference and intersexual differences were revealed in cooperative actions. The novel multi-partner devices were not only used by dolphin pairs but also by dolphin trios and quartets, providing evidence for group-level cooperation. In addition, a novel food-sharing device was used prosocially by dolphin pairs. Finally, the introduction of these cognitive enrichments leads to measurable short- and long-term welfare improvement. Thus, the use of these cognitive enrichments paired with systematic data collection bridged science with welfare. Future studies will investigate intersexual differences in independent groups, the emergence and function of cooperative interactions, and the socio-dynamics using cognitive enrichments.

Habitat Use by Indo-Pacific Bottlenose Dolphins Settled in a New Area around Amakusa-Shimoshima Island, Japan

Habitat Use by Indo-Pacific Bottlenose Dolphins Settled in a New Area around Amakusa-Shimoshima Island, Japan

Non-invasive age estimation based on faecal DNA using methylation-sensitive high-resolution melting for Indo-Pacific bottlenose dolphins.

Age is necessary information for the study of life history of wild animals. A general method to estimate the age of odontocetes is counting dental growth layer groups (GLGs). However, this method is highly invasive as it requires the capture and handling of individuals to collect their teeth. Recently, the development of DNA-based age estimation methods has been actively studied as an alternative to such invasive methods, of which many have relied on used biopsy samples. However, if DNA-based age estimation can be developed from faecal samples, age estimation can be performed entirely non-invasively. We developed an age estimation model using the methylation rate of two gene regions, GRIA2 and CDKN2A, measured through methylation-sensitive high-resolution melting (MS-HRM) from faecal samples of wild Indo-Pacific bottlenose dolphins (Tursiops aduncus). The age of individuals was known through conducting longitudinal individual identification surveys underwater. Methylation rates were quantified from 36 samples collected from 30 individuals. Both gene regions showed a significant correlation between age and methylation rate. The age estimation model was constructed based on the methylation rates of both genes which achieved sufficient accuracy (after LOOCV: MAE = 5.08, R2 = 0.33) for the ecological studies of the Indo-Pacific bottlenose dolphins, with a lifespan of 40-50 years. This is the first study to report the use of non-invasive faecal samples to estimate the age of marine mammals.

Hepatic concentrations of per- and polyfluoroalkyl substances (PFAS) in dolphins from south-east Australia: Highest reported globally

Per- and polyfluoroalkyl substances (PFAS) concentrations were investigated in hepatic tissue of four dolphin species stranded along the south-east coast of Australia between 2006 and 2021; Burrunan dolphin (Tursiops australis), common bottlenose dolphin (Tursiops truncatus), Indo-Pacific bottlenose dolphin (Tursiops aduncus), and short-beaked common dolphin (Delphinus delphis). Two Burrunan dolphin populations represented in the dataset have the highest reported global population concentrations of ∑25PFAS (Port Phillip Bay median 9750 ng/g ww, n = 3, and Gippsland Lakes median 3560 ng/g ww, n = 8), which were 50–100 times higher than the other species reported here; common bottlenose dolphin (50 ng/g ww, n = 9), Indo-Pacific bottlenose dolphin (80 ng/g ww, n = 1), and short-beaked common dolphin (61 ng/g ww, n = 12). Also included in the results is the highest reported individual ∑25PFAS (19,500 ng/g ww) and PFOS (18,700 ng/g ww) concentrations, at almost 30 % higher than any other Cetacea reported globally.Perfluorooctane sulfonate (PFOS) was above method reporting limits for all samples (range; 5.3–18,700 ng/g ww), and constituted the highest contribution to overall ∑PFAS burdens with between 47 % and 99 % of the profile across the dataset. The concentrations of PFOS exceed published tentative critical concentrations (677–775 ng/g) in 42 % of all dolphins and 90 % of the critically endangered Burrunan dolphin.This research reports for the first time novel and emerging PFASs such as 6:2 Cl-PFESA, PFMPA, PFEECH and FBSA in marine mammals of the southern hemisphere, with high detection rates across the dataset. It is the first study to show the occurrence of PFAS in the tissues of multiple species of Cetacea from the Australasian region, demonstrating high global concentrations for inshore dolphins. Finally, it provides key baseline knowledge to the potential exposure and bioaccumulation of PFAS compounds within the coastal environment of south-east Australia.

Genomic Divergence and the Evolution of Ecotypes in Bottlenose Dolphins (Genus Tursiops).

Climatic changes have caused major environmental restructuring throughout the world's oceans. Marine organisms have responded to novel conditions through various biological systems, including genomic adaptation. Growing accessibility of next-generation DNA sequencing methods to study nonmodel species has recently allowed genomic changes underlying environmental adaptations to be investigated. This study used double-digest restriction-site associated DNA (ddRAD) sequence data to investigate the genomic basis of ecotype formation across currently recognized species and subspecies of bottlenose dolphins (genus Tursiops) in the Southern Hemisphere. Subspecies-level genomic divergence was confirmed between the offshore common bottlenose dolphin (T. truncatus truncatus) and the inshore Lahille's bottlenose dolphin (T. t. gephyreus) from the southwestern Atlantic Ocean (SWAO). Similarly, subspecies-level divergence is suggested between inshore (eastern Australia) Indo-Pacific bottlenose dolphin (T. aduncus) and the proposed Burrunan dolphin (T. australis) from southern Australia. Inshore bottlenose dolphin lineages generally had lower genomic diversity than offshore lineages, a pattern particularly evident for T. t. gephyreus, which showed exceptionally low diversity. Genomic regions associated with cardiovascular, musculoskeletal, and energy production systems appear to have undergone repeated adaptive evolution in inshore lineages across the Southern Hemisphere. We hypothesize that comparable selective pressures in the inshore environment drove similar adaptive responses in each lineage, supporting parallel evolution of inshore bottlenose dolphins. With climate change altering marine ecosystems worldwide, it is crucial to gain an understanding of the adaptive capacity of local species and populations. Our study provides insights into key adaptive pathways that may be important for the long-term survival of cetaceans and other organisms in a changing marine environment.

Acoustical and visual monitoring of the discharge process of the last captive Indo-Pacific Bottlenose Dolphin in South Korea

The discharge of Bibong, a 23-year-old Indo-Pacific Bottlenose Dolphin, marked the end of its 17-year aquatic show life in an aquarium on November 16, 2022. The three-month adaptation training included a temporary retreat due to typhoon HINNAMNOR. To continuously capture underwater sound, two hydrophones were alternately used due to limited operation time. Additionally, two CCTV cameras and two drones were employed to record events around the discharge cage, with one observer per drone. Using a CNN-based whistle profile extractor, whistle sounds were automatically detected and exported as time-stamped data. The corresponding CCTV and drone clips were examined for each whistle encounter. Our study presents the whistle sound encounter pattern and the synchronized acoustical and video data. These findings offer valuable insights into understanding the discharge process, serving as a reference for future discharge initiatives and welfare assessments of captive marine mammals.

Rehabilitation of captive Indo-Pacific bottlenose dolphin (Tursiops aduncus) as a way to combat the effects of climate change

Climate change caused by human industrialization is an unavoidable global problem which started in the 20th century. The high concentration of greenhouse gases has caused global warming, natural disaster, rising sea level, and threatened marine wildlife. It has been proven to decrease the survival rate of dolphins by 12%. This research aims to describe the behavior and assess the readiness to release rehabilitated Tursiops aduncus in Umah Lumba, Banyuwedang Bay, Bali, to boost the wild dolphin population. Visual observation was made on three individuals: Rambo, Rocky and Johnny, at Umah Lumba, Banyuwedang Bay Bali, on March 2021, who have been in the rehabilitation facility since September 2019. The three individuals can be identified by the physical characteristics of their head, mandible, and dorsal fin. The dolphins have developed nine wild-dolphin-like behaviors: respiratory, exploratory, resting, reproductive, social, predatory, spy-hopping, tail-clapping, and sneezing. This rehabilitation program is essential because it increases the population of wild dolphins by acclimating, adapting, and training former captive dolphins for release.

Automatic detection and taxonomic identification of dolphin vocalisations using convolutional neural networks for passive acoustic monitoring

A novel framework for acoustic detection and species identification is proposed to aid passive acoustic monitoring studies on the endangered Indian Ocean humpback dolphin (Sousa plumbea) in South African waters. Convolutional Neural Networks (CNNs) were used for both detection and identification of dolphin vocalisations tasks, and performance was evaluated using custom and pre-trained architectures (transfer learning). In total, 723 min of acoustic data were annotated for the presence of whistles, burst pulses and echolocation clicks produced by Delphinus delphis (~45.6%), Tursiops aduncus (~39%), Sousa plumbea (~14.4%), Orcinus orca (~1%). The best performing models for detecting dolphin presence and species identification used segments (spectral windows) of two second lengths and were trained using images with 70 and 90 dpi, respectively. The best detection model was built using a customised architecture and achieved an accuracy of 84.4% for all dolphin vocalisations on the test set, and 89.5% for vocalisations with a high signal to noise ratio. The best identification model was also built using the customised architecture and correctly identified S. plumbea (96.9%), T. aduncus (100%), and D. delphis (78%) encounters in the testing dataset. The developed framework was designed based on the knowledge of complex dolphin sounds and it may assists in finding suitable CNN hyper-parameters for other species or populations. Our study contributes towards the development of an open-source tool to assist long-term studies of endangered species, living in highly diverse habitats, using passive acoustic monitoring.

Sex bias in mortality risk changes over the lifespan of bottlenose dolphins.

Research on sex biases in longevity in mammals often assumes that male investment in competition results in a female survival advantage that is constant throughout life. We use 35 years of longitudinal data on 1003 wild bottlenose dolphins (Tursiops aduncus) to examine age-specific mortality, demonstrating a time-varying effect of sex on mortality hazard over the five-decade lifespan of a social mammal. Males are at higher risk of mortality than females during the juvenile period, but the gap between male and female mortality hazard closes in the mid-teens, coincident with the onset of female reproduction. Female mortality hazard is non-significantly higher than male mortality hazard in adulthood, resulting in a moderate male bias in the oldest age class. Bottlenose dolphins have an intensely male-competitive mating system, and juvenile male mortality has been linked to social competition. Contrary to predictions from sexual selection theory, however, male-male competition does not result in sustained male-biased mortality. As female dolphins experience high costs of sexual coercion in addition to long and energetically expensive periods of gestation and lactation, this suggests that substantial female investment in reproduction can elevate female mortality risk and impact sex biases in lifespan.

Evidence of signature whistles produced by Indian Ocean bottlenose dolphins (Tursiops aduncus) in Mozambique

ABSTRACT Individually distinctive signature whistles are used by common bottlenose dolphins (Tursiops truncatus) during social interactions and to facilitate group cohesion. There is evidence from a few populations that Indian Ocean bottlenose dolphins (T. aduncus) also use signature whistles. We investigated this from a coastal resident population of T. aduncus in Mozambique. Video-audio data were collected during recreational swim-with activities over 12 years, where potential signature whistles were identified from 28 individuals. Of the 405 whistles documented, 75% were produced in SIGID bouts. Visual assessment of individual signature whistle contours demonstrated temporal stability for up to 8 years. Overall, most signature whistle types had upsweep frequency modulation and were emitted as multiloop whistles. Comparing all whistle contours to each other indicated low discrimination between individuals, with contours frequently categorised together. However, sex differences in the frequency characteristics of whistles were identified, with females whistling at lower frequencies than males. Our results indicate either a shared whistle repertoire or identity encoding with subtle contour features, requiring acute auditory perception and discrimination to decipher caller identity. More widespread geographic investigation into signature whistle use may demonstrate variation in acoustic communication systems for bottlenose dolphins, which are thus far not well understood.

Inter-group alliance dynamics in Indo-Pacific bottlenose dolphins (Tursiops aduncus).

The social intelligence hypothesis holds that complex social relationships are the major selective force underlying the evolution of large brain size and intelligence. Complex social relationships are exemplified by coalitions and alliances that are mediated by affiliative behavior, resulting in differentiated but shifting relationships. Male Indo-Pacific bottlenose dolphins in Shark Bay, Australia, form three alliance levels or 'orders', primarily among non-relatives. Strategic alliance formation has been documented within both first- and second-order alliances and between second-order alliances ('third-order alliances'), revealing that the formation of strategic inter-group alliances is not limited to humans. Here we conducted a fine-scale study on 22 adult males over a 6-year period to determine if third-order alliance relationships are differentiated, and mediated by affiliative interactions. We found third-order alliance relationships were strongly differentiated, with key individuals playing a disproportionate role in maintaining alliances. Nonetheless, affiliative interactions occurred broadly between third-order allies, indicating males maintain bonds with third-order allies of varying strength. We also documented a shift in relationships and formation of a new third-order alliance. These findings further our understanding of dolphin alliance dynamics and provide evidence that strategic alliance formation is found in all three alliance levels, a phenomenon with no peer among non-human animals.

Entanglement in recreational fishing gear poses a threat to estuarine and coastal dolphins: Animal welfare and population level impacts should guide intervention decision making

Derelict and active fishing gear poses a threat to marine wildlife. This study details Indo-Pacific bottlenose dolphin entanglements in recreational fishing gear in the Peel-Harvey Estuary, Western Australia between 2016 and 2022. Eight entanglements were recorded, three resulted in death. While concerning from an animal welfare perspective, the impact of entanglements on the viability of the local dolphin population was low. This is as majority of affected individuals were juvenile males. Should entanglements result in the loss of reproductive females, or impact their reproductive success, the population trajectory could quickly change. As such, management decision making should consider population level impacts as well as the welfare of entangled individuals. Government agencies, together with relevant stakeholders, should work together to maintain preparedness to respond to entanglements and take preventative action that lowers the risk of interactions with recreational fishing gear.

Observations and Detailed Descriptions of Sociosexual Behavior in Wild Indo-Pacific Bottlenose Dolphins (Tursiops aduncus)

Sociosexual behavior is not directly related to reproduction. It is observed between mature and immature individuals of both sexes and interactions can be between mixed- or same-sex individuals. This behavior may have important social functions. We observed and recorded the sociosexual behavior of wild Indo-Pacific bottlenose dolphins (Tursiops aduncus), underwater off Mikura Island, Japan, with regards to erection and mounting. This behavior was observed mainly between mothers and sons and in groups of subadult males (age 1–13 years). In subadult males, mounting behavior toward one passive individual from two or more individuals playing an active role, occurred in most cases. This behavior involving three or more participants has rarely been observed in other animal species, except for bowhead whales (Balaena mysticetus), common bottlenose dolphins (T. truncatus), and beluga whales (Delphinapterus leucas). Sociosexual behavior in the Mikura Island dolphins may not be agonistic because individuals in the passive role did not try to escape from the individuals playing the active role. Further studies on sociosexual behavior T. aduncus could reveal the social functions of this behavior, such as younger animals practicing mating behaviors required as adults and developing their relationships for when they are adults.

Reconstructing the colonization history of Indo-Pacific bottlenose dolphins (Tursiops aduncus) in Northwestern Australia.

Bottlenose dolphins (Tursiops spp.) are found in waters around Australia, with T. truncatus typically occupying deeper, more oceanic habitat, while T. aduncus occur in shallower, coastal waters. Little is known about the colonization history of T. aduncus along the Western Australian coastline; however, it has been hypothesized that extant populations are the result of an expansion along the coastline originating from a source in the north of Australia. To investigate the history of coastal T. aduncus populations in the area, we generated a genomic SNP dataset using a double-digest restriction-site-associated DNA (ddRAD) sequencing approach. The resulting dataset consisted of 103,201 biallelic SNPs for 112 individuals which were sampled from eleven coastal and two offshore sites between Shark Bay and Cygnet Bay, Western Australia. Our population genomic analyses showed a pattern consistent with the proposed source in the north with significant isolation by distance along the coastline, as well as a reduction in genomic diversity measures along the coastline with Shark Bay showing the most pronounced reduction. Our demographic analysis indicated that the expansion of T. aduncus along the coastline began around the last glacial maximum and progressed southwards with the Shark Bay population being founded only 13 kya. Our results are in line with coastal colonization histories inferred for Tursiops globally, highlighting the ability of delphinids to rapidly colonize novel coastal niches as habitat is released during glacial cycle-related global sea level and temperature changes.

Yawning in Wild Indo-Pacific Bottlenose Dolphins (Tursiops aduncus)

Yawning in Wild Indo-Pacific Bottlenose Dolphins (Tursiops aduncus)