Incoherent Contributions Research Articles

Data Analysis of Dynamics in Protein Solutions Using Quasi-Elastic Neutron Scattering─Important Insights from Polarized Neutrons.

Protein dynamics play a vital role in biology. Quasi elastic neutron scattering (QENS) is an ideal method to access these dynamics. To isolate protein dynamics, it is important to separate the signal of the buffer and the protein. Normally data analysis is performed based on the assumption that the scattering spectrum is incoherent. To observe the full range of protein dynamics, it is necessary to perform the experiments in solution. This solution is usually a fully deuterated buffer, while the protein remains protonated. It is generally assumed that subtracting the buffer contribution removes all coherent signal from the measured spectrum, and the rest can be considered as purely incoherent. Up until recently, there was no way to experimentally verify this assumption. Polarized QENS experiments allow for the coherent and incoherent contributions to be separated. By comparing the results from the polarized QENS experiment and the standard analysis method from unpolarized QENS, we are thus able to check this assumption experimentally. We show that the pure incoherent spectrum obtained from polarization analysis does not match the results for unpolarized QENS. We discuss the implications of this for data analysis and possible solutions to the problem, as well as mitigation techniques for standard QENS.

Incoherent fermionic dark matter absorption with nucleon Fermi motion

We investigate the incoherent regime of the fermionic dark matter absorption by nuclei using the relativistic Fermi gas model and nuclear form factors. With the momentum transfer being roughly equal to the dark matter mass mχ, the incoherent regime contributes significantly to the absorption process for mχ≳100 MeV with a spin-independent operator and for even smaller mass with a spin-dependent one. We also compare the situations for various target nuclei (Xe131, Ge72, Ar40, Ne20, and He4) that are typically used in the dark matter direct detection. A heavier nucleus actually has the advantage of probing the incoherent scattering of the fermionic absorption dark matter. Observing both the coherent and incoherent contributions would be an important justification of the fermionic dark matter absorption. Published by the American Physical Society 2024

Localization effects in disordered quantum batteries.

We investigate the effect of localization on the local charging of quantum batteries (QBs) modeled by disordered spin systems. Two distinct schemes based on the transverse-field random Ising model are considered, with Ising couplings defined on a Chimera graph and on a linear chain with up to next-to-nearest-neighbor interactions. By adopting a low-energy demanding charging process driven by local fields only, we obtain that the maximum extractable energy by unitary processes (ergotropy) is highly enhanced in the ergodic phase in comparison with the many-body localization (MBL) scenario. As we turn off the next-to-nearest-neighbor interactions in the Ising chain, we have the onset of the Anderson localization phase. We then show that the Anderson phase exhibits a hybrid behavior, interpolating between large and small ergotropy as the disorder strength is increased. We also consider the splitting of total ergotropy into its coherent and incoherent contributions. This incoherent part implies in a residual ergotropy that is fully robust against dephasing, which is a typical process leading to the self-discharging of the battery in a real setup. Our results are experimentally feasible in scalable systems, such as in superconducting integrated circuits.

Magic angle spinning effects on longitudinal NMR relaxation: 15N in L-histidine

Solid-state magnetic resonance is a unique technique that can reveal the dynamics of complex biological systems with atomic resolution. Longitudinal relaxation is a mechanism that returns longitudinal nuclear magnetization to its thermal equilibrium by incoherent processes. The measured longitudinal relaxation rate constant however represents the combination of both incoherent and coherent contributions to the change of nuclear magnetization. This work demonstrates the effect of magic angle spinning rate on the longitudinal relaxation rate constant in two model compounds: L-histidine hydrochloride monohydrate and glycine serving as proxies for isotopically-enriched biological materials. Most notably, it is demonstrated that the longitudinal N15 relaxation of the two nitrogen nuclei in the imidazole ring in histidine is reduced by almost three orders of magnitude at the condition of rotational resonance with the amine, while the amine relaxation rate constant is increased at these conditions. The observed phenomenon may have radical implications for the solid-state magnetic resonance in biophysics and materials, especially in the proper measurement of dynamics and as a selective serial transfer step in dynamic nuclear polarization.

Modeling multiply scattered light in full-field optical coherence tomographic imaging of biological tissues

In this work, we have constructed a handheld full-field optical coherence tomography (FFOCT) system with high spatial resolution, and the Michelson interferometer (served as compensating optical path) and Fizeau interferometer (served as detection) were mounted in series in this system. The expressions of the multiple scattered light decomposed as the sum of incoherent and coherent contribution were derived based on the diffusion equation and mutual coherence function, and the variations of resolution with imaging depth were derived by using the model of multiple scattering. Experiments were conducted on samples composed of the USAF 1951 resolution target covered by the onion slice and human finger-skin slice, respectively, to validate and evaluate the accuracy of our model. A method of image restoration is then presented in which the relation between the resolution and measuring depth and the simulated PSF in the absence of multiple scattering are employed. With the help of this method the lateral resolution of 2.2 μm and 3.9 μm were separately achieved in the onion slice (measuring depth of 64 μm) and human finger-skin slice (measuring depth of 60 μm), and more tiny structures in the en face image of human finger-skin and moth wings were visible. In addition, a novel method for estimating the values of mean free path and anisotropy of scattering medium was proposed.

Wavelet analysis of supersonic shock-boundary-layer interaction

We present a wavelet analysis of supersonic shock-boundary-layer interaction. We have used direct numerical simulation data for supersonic flow over a compression ramp and performed orthogonal anisotropic wavelets. The wavelet-based method of extracting coherent structures is applied to the flow vorticity field, decomposed into coherent and incoherent contributions using thresholding of the wavelet coefficients. The statistics of the coherent part of vorticity are close to the statistics of the total field. The study aims to improve our understanding of the shock-boundary-layer interaction, the role of vorticity, and the relationship between the flow's coherent and incoherent vorticity components with the near-wall sound. Our analysis shows a substantial correlation between the incoherent part of vorticity components and wall-pressure fluctuations.

Collective dynamics and self-motions in the van der Waals liquid tetrahydrofuran from meso- to inter-molecular scales disentangled by neutron spectroscopy with polarization analysis.

By using time-of-flight neutron spectroscopy with polarization analysis, we have separated coherent and incoherent contributions to the scattering of deuterated tetrahydrofuran in a wide scattering vector (Q)-range from meso- to inter-molecular length scales. The results are compared with those recently reported for water to address the influence of the nature of inter-molecular interactions (van der Waals vs hydrogen bond) on the dynamics. The phenomenology found is qualitatively similar in both systems. Both collective and self-scattering functions are satisfactorily described in terms of a convolution model that considers vibrations, diffusion, and a Q-independent mode. We observe a crossover in the structural relaxation from being dominated by the Q-independent mode at the mesoscale to being dominated by diffusion at inter-molecular length scales. The characteristic time of the Q-independent mode is the same for collective and self-motions and, contrary to water, faster and with a lower activation energy (≈1.4 Kcal/mol) than the structural relaxation time at inter-molecular length scales. This follows the macroscopic viscosity behavior. The collective diffusive time is well described by the de Gennes narrowing relation proposed for simple monoatomic liquids in a wide Q-range entering the intermediate length scales, in contraposition to the case of water.

Full counting statistics of interacting lattice gases after an expansion: The role of condensate depletion in many-body coherence

We study the full counting statistics (FCS) of quantum gases in samples of thousands of interacting bosons, detected atom-by-atom after a long free-fall expansion. In this far-field configuration, the FCS reveals the many-body coherence from which we characterize iconic states of interacting lattice bosons, by deducing the normalized correlations $g^{(n)}(0)$ up to the order $n=6$. In Mott insulators, we find a thermal FCS characterized by perfectly-contrasted correlations $g^{(n)}(0)= n!$. In interacting Bose superfluids, we observe small deviations to the Poisson FCS and to the ideal values $g^{(n)}(0)=1$ expected for a pure condensate. To describe these deviations, we introduce a heuristic model that includes an incoherent contribution attributed to the depletion of the condensate. The predictions of the model agree quantitatively with our measurements over a large range of interaction strengths, that includes the regime where the condensate is strongly depleted by interactions. These results suggest that the condensate component exhibits a full coherence $g^{(n)}(0) =1$ at any order $n$ up to $n=6$ and at arbitrary interaction strengths. The approach demonstrated here is readily extendable to characterize a large variety of interacting quantum states and phase transitions.

Enhancement of incoherent bremsstrahlung in proton-nucleus scattering in the Δ -resonance energy region

We investigate emission of the bremsstrahlung photons in the scattering of protons off nuclei at the $\Delta$-resonance energy region. Including properties of $\Delta$-resonance in the nucleus-target to the bremsstrahlung model, we find the following. (1) Ratio between incoherent emission and coherent emission is about $10^{6}$--$10^{7}$ for $p + \isotope[197]{Au}$ (without $\Delta$-resonance) at energy of proton beam $E_{\rm p}$ of 190~MeV, where the calculated full bremsstrahlung spectrum is in good agreement with experimental data. This confirms importance of incoherent processes in study of $\Delta$-resonances in this reaction, which have never been studied yet. We estimate coherent and incoherent contributions, electric and magnetic contributions, full bremsstrahlung spectra for the scattering of protons on the \isotope[12]{C}, \isotope[40]{Ca}, \isotope[208]{Pb} nuclei at $E_{\rm p}=800$~MeV, we find conditions for the most intensive bremsstrahlung emission. (2) Transition $p\,N \to \Delta^{+} N$ in the nucleus-target reinforces emission of bremsstrahlung photons in that reaction at $E_{\rm p}=800$~MeV. Difference between the spectra for normal nuclei and nuclei with included $\Delta$-resonance is larger for more light nuclei, but the spectra are larger for heavier nuclei. (3) Taking into account shortly lived state of $\Delta$-resonance, we find that the spectrum with $\Delta$-resonance in the nucleus-target is essentially larger in the high energy photon region than the spectrum without this $\Delta$-resonance (corresponding calculations for \isotope[12][\Delta]{C}, \isotope[40][\Delta]{Ca}, \isotope[208][\Delta]{Pb} in comparison with \isotope[12]{C}, \isotope[40]{Ca}, \isotope[208]{Pb} are provided). Such an aspect is recommended for registration of $\Delta$-resonances in nuclei in possible future experiments.

The effect of seafloor roughness on passive estimates of the seabed reflection coefficient.

In this work, a model is developed for the effect of seafloor interface roughness on passive estimates of the reflection coefficient. The main result is an expression for the total intensity reflection coefficient, with separate coherent and incoherent contributions. Assumptions of this model include constant sound speed in the ocean, stationary and Gaussian seafloor roughness, and ambient noise. Numerical examples for the coherent, incoherent, and total contributions to the intensity reflection coefficient are presented for halfspace and layered environments-all using the small slope approximation. To illustrate the potential parameter errors that results from using a flat interface wave model when roughness is present, a geoacoustic inversion is performed using the proposed model as input data. A joint roughness-geoacoustic inversion of simulated data using the proposed model was also performed. It was found that the true roughness and geoacoustic parameters can be inverted using this model, but the sensitivity to the outer scale of the rough surface has the highest error compared to the other parameters.

Molecular specificity in neutron imaging: the case of hydrogen adsorption in metal organic frameworks.

Neutron imaging is the technique of choice for a number of in situ and operando applications, where a high penetration power is required. White-beam neutron imaging and energy-resolved Bragg edge imaging are successful techniques, the former for the detection of specific elements characterized by strong neutron attenuation and the latter for studying crystal structures. Here we discuss the capabilities of energy-selective neutron imaging taking advantage of the incoherent and inelastic scattering interactions in hydrogenous materials, as a way to obtain molecular-specific information about the composition of a given sample. While few examples from the available literature are discussed, a worked example is presented based on new experimental data on molecular-hydrogen adsorption and conversion in the HKUST-1 metal organic framework.

Identifying incoherent mixing effects in the coherent two-dimensional photocurrent excitation spectra of semiconductors.

We have previously demonstrated that in the context of two-dimensional (2D) coherent electronic spectroscopy measured by phase modulation and phase-sensitive detection, an incoherent nonlinear response due to pairs of photoexcitations produced via linear excitation pathways contributes to the measured signal as an unexpected background [Grégoire et al., J. Chem. Phys. 147, 114201 (2017)]. Here, we simulate the effect of such incoherent population mixing in the photocurrent signal collected from a GaAs solar cell by acting externally on the transimpedance amplifier circuit used for phase-sensitive detection, and we identify an effective strategy to recognize the presence of incoherent population mixing in 2D data. While we find that incoherent mixing is reflected by the crosstalk between the linear amplitudes at the two time-delay variables in the four-pulse excitation sequence, we do not observe any strict phase correlations between the coherent and incoherent contributions, as expected from modeling of a simple system.

Discrimination of coherent and incoherent cathodoluminescence using temporal photon correlations

We present a method to separate coherent and incoherent contributions of cathodoluminescence (CL) by using a time-resolved coincidence detection scheme. For a proof-of-concept experiment, we generate CL by irradiating an optical multimode fiber with relativistic electrons in a transmission electron microscope. A temporal analysis of the CL reveals a large peak in coincidence counts for small time delays, also known as photon bunching. Additional measurements allow us to attribute the bunching peak to the temporal correlations of coherent CL (Cherenkov radiation) created by individual electrons. Thereby, we show that coincidence measurements can be employed to discriminate coherent from incoherent CL and to quantify their contribution to the detected CL signal. This method provides additional information for the correct interpretation of CL, which is essential for material characterization. Furthermore, it might facilitate the study of coherent electron–matter interaction.

Wavelet analysis of high-speed transition and turbulence over a flat surface

This paper presents a study of high speed boundary layers using the wavelet method. We analyze direct numerical simulation data for high-speed, compressible transitional, and turbulent boundary layer flows using orthogonal anisotropic wavelets. The wavelet-based method of extraction of coherent structures is applied to the flow vorticity field, decomposed into coherent and incoherent contributions using thresholding of the wavelet coefficients. We show that the coherent parts of the flow, enstrophy spectra, are close to the statistics of the total flow, and the energy of the incoherent, noise-like background flow is equidistributed. Furthermore, we investigate the distribution of the incoherent vorticity in the transition and turbulent regions and examine the correlation with the near-wall pressure fluctuations. The results of our analysis suggest that the incoherent vorticity part is not a random “noise” and correlates with the actual noise emanating from inside the boundary layer. This could have implications regarding our understanding of the physics of compressible boundary layers and the development of engineering models.

Coherent contributions to population dynamics in a semiconductor microcavity

Multidimensional coherent spectroscopy (MDCS) is used to separate coherent and incoherent nonlinear contributions to the population-time dynamics in a GaAs-based semiconductor microcavity encapsulating a single InGaAs quantum well. In a three-pulse four-wave-mixing scheme, the second delay time is the population time that in MDCS probes excited-state coherences and population dynamics. Nonlinear optical interactions can mix these contributions, which are isolated here for the lower- and upper-exciton polariton through the self- and mutual-interaction features. Results show fast decays and oscillations arising from the coherent response, including a broad stripe along the absorption energy axis, and longer time mutual-interaction features that do not obey a simple population decay model. These results are qualitatively replicated by Bloch equation simulations for the $1s$ exciton strongly coupled to the intracavity field. The simulations allow for separation of coherent and incoherent Pauli-blocking and Coulomb interaction terms within the ${\ensuremath{\chi}}^{(3)}$-limit, and a direct comparison of each feature in one-quantum rephasing and zero-quantum spectra.

Unifying Quantum and Classical Speed Limits on Observables

The presence of noise or the interaction with an environment can radically change the dynamics of observables of an otherwise isolated quantum system. We derive a bound on the speed with which observables of open quantum systems evolve. This speed limit divides into Mandalestam and Tamm's original time-energy uncertainty relation and a time-information uncertainty relation recently derived for classical systems, generalizing both to open quantum systems. By isolating the coherent and incoherent contributions to the system dynamics, we derive both lower and upper bounds to the speed of evolution. We prove that the latter provide tighter limits on the speed of observables than previously known quantum speed limits, and that a preferred basis of \emph{speed operators} serves to completely characterize the observables that saturate the speed limits. We use this construction to bound the effect of incoherent dynamics on the evolution of an observable and to find the Hamiltonian that gives the maximum coherent speedup to the evolution of an observable.

Structural studies of 1H-containing liquids by polarized neutrons: Chemical environment and wavelength dependence of the incoherent background

Following a demonstration of how neutron diffraction with polarization analysis may be applied for the accurate determination of the coherent static structure factor of disordered materials containing substantial amounts of proton nuclei (Temleitner et al., Phys. Rev. B 92, 014201, 2015), we now focus on the incoherent scattering. Incoherent contributions are responsible for the great difficulties while processing standard (non-polarized) neutron diffraction data from hydrogenous materials, hence the importance of the issue. Here we report incoherent scattering intensities for liquid acetone, cyclohexane, methanol and water, as function of the 1H/H ratio. The incoherent intensities are determined directly by polarized neutron diffraction. This way, possible variations of the incoherent background due to the changing chemical environment may be monitored. In addition, for some of the water samples, incoherent intensities as a function of the wavelength of the incident neutron beam (at 0.4, 0.5 and 0.8 Å) have also been measured. It is found that in each case, the incoherent intensity can be described by a single Gaussian function, within statistical errors. The (full) width (at half maximum) of the Gaussians clearly depends on the applied wavelength. On the other hand, the different bonding environments of hydrogen atoms do not seem to affect the width of the Gaussian.

Femtosecond phononic coupling to both spins and charges in a room-temperature antiferromagnetic semiconductor

Spintronics is postulated on the possibility to employ the magnetic degree of freedom of electrons for computation and couple it to charges. In this view, the combination of the high-frequency of spin manipulations offered by antiferromagnets, with the wide tunability of the electronic properties peculiar of semiconductors provides a promising and intriguing platform. Here we explore this scenario in $\alpha$-MnTe, which is a semiconductor antiferromagnetically ordered at room temperature. Relying on a Raman mechanism and femtosecond laser pulses, we drive degenerate modes of coherent optical phonons, which modulate the chemical bonds involved in the super-exchange interaction. The spectrally-resolved measurements of the transient reflectivity reveal a coherent modulation of the band-gap at the frequency of 5.3 THz. The detection of the rotation of the polarisation, typically associated with magneto-optical effects, shows coherent and incoherent contributions. Modelling how the ionic motion induced by the phonons affects the exchange interaction in the material, we calculate the photoinduced THz spin dynamics: the results predict both a coherent and incoherent response, the latter of which is consistent with the experimental observation. Our work demonstrates that the same phonon modes modulate both the charge and magnetic degree of freedom, suggesting the resonant pumping of phonons as a viable way to link spin and charge dynamics even in nonlinear regimes.

Incoherent transport across the strange-metal regime of overdoped cuprates.

Strange metals possess highly unconventional electrical properties, such as a linear-in-temperature resistivity1-6, an inverse Hall angle that varies as temperature squared7-9 and a linear-in-field magnetoresistance10-13. Identifying the origin of these collective anomalies has proved fundamentally challenging, even in materials such as the hole-doped cuprates that possess a simple bandstructure. The prevailing consensus is that strange metallicity in the cuprates is tied to a quantum critical point at a doping p* inside the superconducting dome14,15. Here we study the high-field in-plane magnetoresistance of two superconducting cuprate families at doping levels beyond p*. At all dopings, the magnetoresistance exhibits quadrature scaling and becomes linear at high values of the ratio of the field and the temperature, indicating that the strange-metal regime extends well beyond p*. Moreover, the magnitude of the magnetoresistance is found to be much larger than predicted by conventional theory and is insensitive to both impurity scattering and magnetic field orientation. These observations, coupled with analysis of the zero-field and Hall resistivities, suggest that despite having a single band, the cuprate strange-metal region hosts two charge sectors, one containing coherent quasiparticles, the other scale-invariant 'Planckian' dissipators.

Energetic advantages of nonadiabatic drives combined with nonthermal quantum states

Unitary drivings of quantum systems are ubiquitous in experiments and applications of quantum mechanics and the underlying energetic aspects, particularly relevant in quantum thermodynamics, are receiving growing attention. We investigate energetic advantages in unitary driving obtained from initial non-thermal states. We introduce the non-cyclic ergotropy to quantify the energetic gains, from which coherent (coherence-based) and incoherent (population-based) contributions are identified. In particular, initial quantum coherences appear to be always beneficial whereas non-passive population distributions not systematically. Additionally, these energetic gains are accessible only through non-adiabatic dynamics, contrasting with the usual optimality of adiabatic dynamics for initial thermal states. Finally, following frameworks established in the context of shortcut-to-adiabaticity, the energetic cost related to the implementation of the optimal drives are analysed and, in most situations, are found to be smaller than the energetic cost associated with shortcut-to-adiabaticity. We treat explicitly the example of a two-level system and show that energetic advantages increase with larger initial coherences, illustrating the interplay between initial coherences and the ability of the dynamics to consume and use coherences.