Helium in China highly depends on import at present, so the most practical way to change the situation is searching for medium-to-large natural gas fields with high helium content. Therefore, the hydrocarbon accumulation mechanism and the helium origin of the Weiyuan high-helium natural gas reservoir have been analyzed to find out the feasibility of finding natural gas field with high helium content in the Presinian strata of the Sichuan Basin. Based on twelve outcrop sections and drilling data of four wells encountering the Presinian strata, the petrological features, sedimentary facies and source rocks of Presinian strata were systematically analyzed, which shows that the sedimentary formation developed in the Presinian is the Nanhua system, and the stratigraphic sequence revealed by outcrop section in the eastern margin includes the Nantuo, Datangpo, Gucheng and Liantuo Fms, and it is inferred that the same stratigraphic sequence may occur inside the basin. The Nantuo, Gucheng and Liantuo Fms are mainly glacial deposits of glutenite interbedded with mudstone; the Datangpo Fm is interglacial deposits of sandstone and shale, the lower part shale, rich in organic matter, is fairly good source rock. Further study showed that the Nantuo coarse-grained clastic reservoir, Datangpo source rock and the intruded granite “helium source rock” make up a good high-helium gas system. Controlled by the early rift, the thick Presinian sedimentary rocks occur primarily inside the rift. The distribution of sedimentary rocks and granite in the basin was predicted by use of the seismic data, which shows that the feasibility of finding high-helium gas reservoirs in Ziyang area of the Sichuan Basin is great.