Abstract Purple paddy (Hydragric Anthrosol in FAO soil classification) is one of important soil resources in Chongqing, China. Long-term conservation tillage may alter distribution of soil organic carbon, nitrogen, and enzyme activities. The objectives of this study were to investigate the impacts of different tillage systems (conventional tillage with rotation of rice and winter fallow (CT-r) system, no-till and ridge culture with rotation of rice and winter fallow (NT-r) system, no-till and ridge culture with rotation of rice and rape (NT-rr) system and conventional tillage with rotation of rice and rape (CT-rr) system) on the depth distribution of soil total organic carbon, nitrogen and enzyme activities (catalase, intverase, and urease activity) in a purple paddy soil after 18 years. Soil total organic carbon and labile organic carbon were significant increased in surface soil layer (0-10 cm) under CT-r, NT-r, and NT-rr systems compared to that under CT-rr system. It indicated that conservation tillage practices can sequester soil organic carbon and reduced CO2/CH4 emission. Soil total nitrogen also significant increased in surface soil layer (0-10 cm) under CT-r, NT-r, and NT-rr systems with the greatest under CT-r system (36%), followed by under NT-rr system (34%), and the least under NT-r system (20%) compared to CT-rr system. No-till, ridge culture, and rotation of rice and winter fallow were increased soil catalase and urease activities, but the greatest was not observed under NT-r system, under which the catalase activities was significant decreased. Soil invertase activities were significant increased under CT-r system compared to CT-rr systems and only a little increased in 0-20 cm soil layer under NT-rr system. Conservation tillage could construct good soil biochemistry environment and maintain soil fertility, and promote agroecosystem sustainable development.