Historical Habitat Research Articles

Defining adult bonefish (Albula vulpes) movement corridors around Grand Bahama in the Bahamian Archipelago

Development on Grand Bahama in the Bahamian Archipelago during the 1950’s to 1970’s resulted in substantial changes to the island’s geography. Hawksbill Creek, which potentially served as a natural migration route for fish from the north side to the south side of the island, was severed and replaced by a man-made canal called the Grand Lucayan Waterway (GLW). Bonefish (Albula spp.), a sport-fish that contributes more than $141 million to the Bahamian economy annually, is one such species that may have been affected. The purpose of this study was to determine contemporary movement corridors of adult bonefish during their spawning season (October to May) in Grand Bahamian waters. This was accomplished by using a passive acoustic telemetry array of 17 receivers and 30 transmitter-implanted individuals. A total of 26,108 detections were logged from 20 of the fish. Eight bonefish tagged on the north side used the GLW to access waters on the south, whereas no transmitter-implanted fish tagged on the south side fully traversed the man-made canal, suggesting that primary spawning areas may be located on the south side of the island. This result is consistent with previous reports that bonefish spawn near deep water which is easier to access on the south side of Grand Bahama. Further supporting this finding, two other bonefish tagged on the north side forayed around the east end of the island and were detected on receivers approximately 88 km from their tagging locations. Additionally, two other bonefish tagged on the north side were detected at the west end of the island, with one individual continuing its movements along the south side of the island for an approximate straight-line distance of 80 km. Canal use typically corresponded to days immediately prior to or after new or full moons, indicating that movements were related to spawning. This study suggests that despite historical habitat modifications, bonefish today use the GLW as a movement corridor for migrations during spawning season, emphasizing the importance of protecting the canal from any activities that could impede connectivity.

Factors influencing the local scale colonisation and change in density of a widespread invasive plant species, Lantana camara, in South India

Identifying factors that underlie invasive species colonisation and change in density could provide valuable insights into the mechanisms of biological invasions and for invasive species management. We examined a suite of factors potentially influencing the landscape-level invasion of Lantana camara L., one of the most ubiquitous invasive species in South Asia. These factors included disturbance factors like forest fires, historical habitat modification, and edge effects, in addition to factors like propagule pressure and habitat suitability. We examined the relative importance of these factors on the colonisation and change in density of L. camara in the Biligiri Rangaswamy Temple Tiger Reserve, Western Ghats, India. We used extensive (1997–2008) datasets tracking the presence and abundance of L. camara and combined these with corresponding data on disturbances, propagule pressure, and habitat suitability. We used an information-theoretic model selection approach to determine the relative importance of each factor on the colonisation and change in density of L. camara. Colonisation was mainly a function of proximity to already established populations (i.e. propagule pressure), whereas increase in L. camara density appeared to be constrained by high fire frequency. Research and management efforts need to recognize the multidimensional nature of mechanisms underlying L. camara’s success during different invasion phases when strategizing interventions to mitigate its effects.

Exploring the Impact of Habitat Size on Phylogeographic Patterning in the Overberg Velvet Worm Peripatopsis overbergiensis (Onychophora: Peripatopsidae).

Evolutionary relationships in the velvet worm species, Peripatopsis overbergiensis, were examined in 3 forest areas in the Overberg region of South Africa to explore the impact of historical habitat fragmentation on the population genetic structure of the species. We collected 84 P. overbergiensis specimens from Grootvadersbosch, Koppie Alleen, and Marloth Nature Reserves and sequenced all these specimens for the cytochrome c oxidase subunit I (COI) locus, whereas a subset of 13 specimens were also sequenced for the 18S rRNA locus. Phylogenetic analyses of the 20 unique COI haplotypes revealed 4 genetically distinct clades, a result that is corroborated by the haplotype network. A hierarchical analysis of genetic variation was performed on the COI haplotype data within the 2 large forested areas, Grootvadersbosch and Marloth Nature Reserves, and across all 3 of the sample localities. These results revealed low haplotypic and nucleotide diversity within the largest Grootvadersbosch Nature Reserve forest and high haplotypic and nucleotide diversity within the fragmented Marloth Nature Reserve forest, whereas Koppie Alleen had the lowest haplotypic and nucleotide diversity. Across all 3 main localities statistically significant F ST values were found, together with the absence of shared haplotypes indicating the absence of maternal gene flow. Divergence time estimations based on the 20 COI haplotypes calculated in BEAST suggest a Pleistocene/Holocene divergence between the 4 clades as a result of habitat fragmentation and the aridification of the region. Our results indicate that conservation efforts should also prioritize linked, smaller fragmented habitats together with continuous habitats to maximize the genetic diversity of saproxylic fauna.

Vegetation Community Response to Tidal Marsh Restoration of a Large River Estuary

Estuaries are biologically productive and diverse ecosystems that provide ecosystem services including protection of inland areas from flooding, filtering freshwater outflows, and providing habitats for fish and wildlife. Alteration of historic habitats, including diking for agriculture, has decreased the function of many estuarine systems, and recent conservation efforts have been directed at restoring these degraded areas to reestablish their natural resource function. The Nisqually Delta in southern Puget Sound is an estuary that has been highly modified by restricting tidal flow, and recent restoration of the delta contributed to one of the largest tidal salt marsh restorations in the Pacific Northwest. We correlated the response of nine major tidal marsh species to salinities at different elevation zones. Our results indicated that wetland species richness was not related to soil pore-water salinity (R2 = 0.03), but were stratified into different elevation zones (R2 = 0.47). Thus, restoration that fosters a wide range of elevations will provide the most diverse plant habitat, and potentially, the greatest resilience to environmental change.

Habitat preferences of an endangered species in developing landscapes: the Bush Stone-curlew on the central coast of New South Wales, Australia

The bush stone-curlew Burhinus grallarius is listed as ‘Near threatened’ on the IUCN Red List of Threatened Species. In NSW, bush stone-curlews are listed as ‘Endangered’ under the Threatened Species Conservation Act 1995. The present study focused on bush stone-curlew populations throughout the central coast of NSW and the aim of this study was to develop an inductive spatial model in Geographical Information System (GIS) of suitable bush stone-curlew habitat based on historical sightings and empirical data. To develop the models, micro-habitat data from 30 sites where bush stone-curlews have been recorded were combined with broad historical habitat maps between Gosford and Port Stephens. The habitat data and developed spatial models indicated that bush stonecurlew sightings are associated with trees dominated by Casuarina glauca and Syncarpia glomulifera. In terms of broad habitat classifications, bush stone-curlews are more likely to be sighted in wet sclerophyll forests (towards Gosford) and dry sclerophyll forests and saline wetlands (Port Stephens). The spatial model developed for this endangered bird will help direct conservation efforts to maintain and promote habitat in areas where urban development is rapidly increasing.

Herb layer extinction debt in highly fragmented temperate forests – Completely paid after 160 years?

The time-delayed extinction of plant species following habitat fragmentation is a well-known phenomenon in ecology. The length of the relaxation time until this ‘extinction debt’ is paid (i.e., until extinctions cease) depends on the ecosystem, species group and extent of fragmentation. Studies of grassland ecosystems have revealed that plant extirpations after fragmentation can occur rapidly when the degree of fragmentation is high. Studies of extinction debt in highly fragmented forests, however, are lacking. In this study, we evaluated the existence of an extinction debt in the Prignitz, Brandenburg, Germany, where 94% of the semi-natural forests have vanished since 1780. We surveyed the herb-layer species of 104 forest patches and fitted species richness as a function of the historical and present-day patch configurations. Models including the present-day habitat area and connectivity explained the present day species richness better than models including historical patch-configuration variables. There was no significant effect of the historical habitat area on the present day species richness. However, the effect of historical patch connectivity on the richness of forest specialists with short-distance dispersal potential was significant when excluding present-day habitat area from the models and habitat quality and heterogeneity were used as covariables. The extinction debt has largely been paid after approximately 160years of relaxation time which contrasts with previous studies of temperate forests that have found extinction debts persisting 120–225years after fragmentation. We demonstrate that extinction debts in temperate forests may be paid off more rapidly if the degree of fragmentation is high.

Historical Northern spotted owl habitat and old-growth dry forests maintained by mixed-severity wildfires

Reconstructing historical habitat could help reverse declining animal populations, but detailed, spatially comprehensive data are rare. For example, habitat for the federally threatened Northern spotted owl (NSO; Strix occidentalis caurina) was thought historically rare because low-severity fires kept forests open and habitat restricted to fire refugia, but spatial historical data are lacking. Here I use public land-surveys to spatially reconstruct NSO habitat and old-growth forests in dry forests in Oregon’s Eastern Cascades in the late-1800s. I used reconstructions of forest structure across about 280,000 ha, including 9,605 tree records and 2,180 section-line descriptions. I was able to reconstruct likely NSO nest trees, nest stands, and foraging and roosting habitat, based on modern NSO habitat studies. Historical nest stands, including sufficient nest trees, were predicted across 22–39 % and foraging and roosting habitat across 11–68 % of the study area, thus neither were rare. More habitat than expected occurred in forests with preceding mixed-severity fires. Early post-fire succession produced foraging and roosting habitat. Mid- to late-succession produced nesting habitat. Late-succession after high-severity fires can also provide NSO habitat. Old-growth forests, covering 76 % of study-area forests, also likely link to preceding mixed-severity fires. Mixed- and high-severity fires strongly shaped historical dry forests and produced important components of historical NSO habitat. Focus on short-term loss of nest sites and territories to these fires is mis-directed. Fuel treatments to reduce these natural fires, if successful, would reduce future habitat of the NSO in dry forests.

Predicting Brook Trout Occurrence in Stream Reaches throughout their Native Range in the Eastern United States

AbstractThe Brook Trout Salvelinus fontinalis is an important species of conservation concern in the eastern USA. We developed a model to predict Brook Trout population status within individual stream reaches throughout the species’ native range in the eastern USA. We utilized hierarchical logistic regression with Bayesian estimation to predict Brook Trout occurrence probability, and we allowed slopes and intercepts to vary among ecological drainage units (EDUs). Model performance was similar for 7,327 training samples and 1,832 validation samples based on the area under the receiver operating curve (∼0.78) and Cohen's kappa statistic (0.44). Predicted water temperature had a strong negative effect on Brook Trout occurrence probability at the stream reach scale and was also negatively associated with the EDU average probability of Brook Trout occurrence (i.e., EDU‐specific intercepts). The effect of soil permeability was positive but decreased as EDU mean soil permeability increased. Brook Trout were less likely to occur in stream reaches surrounded by agricultural or developed land cover, and an interaction suggested that agricultural land cover also resulted in an increased sensitivity to water temperature. Our model provides a further understanding of how Brook Trout are shaped by habitat characteristics in the region and yields maps of stream‐reach‐scale predictions, which together can be used to support ongoing conservation and management efforts. These decision support tools can be used to identify the extent of potentially suitable habitat, estimate historic habitat losses, and prioritize conservation efforts by selecting suitable stream reaches for a given action. Future work could extend the model to account for additional landscape or habitat characteristics, include biotic interactions, or estimate potential Brook Trout responses to climate and land use changes.Received May 9, 2014; accepted August 26, 2014

Revisiting the vanishing refuge model of diversification.

Much of the debate around speciation and historical biogeography has focused on the role of stabilizing selection on the physiological (abiotic) niche, emphasizing how isolation and vicariance, when associated with niche conservatism, may drive tropical speciation. Yet, recent re-emphasis on the ecological dimensions of speciation points to a more prominent role of divergent selection in driving genetic, phenotypic, and niche divergence. The vanishing refuge model (VRM), first described by Vanzolini and Williams (1981), describes a process of diversification through climate-driven habitat fragmentation and exposure to new environments, integrating both vicariance and divergent selection. This model suggests that dynamic climates and peripheral isolates can lead to genetic and functional (i.e., ecological and phenotypic) diversity, resulting in sister taxa that occupy contrasting habitats with abutting distributions. Here, we provide predictions for populations undergoing divergence according to the VRM that encompass habitat dynamics, phylogeography, and phenotypic differentiation across populations. Such integrative analyses can, in principle, differentiate the operation of the VRM from other speciation models. We applied these principles to a lizard species, Coleodactylus meridionalis, which was used to illustrate the model in the original paper. We incorporate data on inferred historic habitat dynamics, phylogeography and thermal physiology to test for divergence between coastal and inland populations in the Atlantic Forest of Brazil. Environmental and genetic analyses are concordant with divergence through the VRM, yet physiological data are not. We emphasize the importance of multidisciplinary approaches to test this and alternative speciation models while seeking to explain the extraordinarily high genetic and phenotypic diversity of tropical biomes.

Plant species richness of very small forests related to patch configuration, quality, heterogeneity and history

AbstractQuestions(i) Is plant species richness related to patch configuration, quality, heterogeneity and history in very small forest patches? (ii) Is there a similar effect of patch configuration, quality, heterogeneity and history on all plant species or does it vary for different plant groups? (iii) Does the importance of patch configuration, quality, heterogeneity and history vary for plant species richness between patch size classes?LocationPrignitz region, western part of Brandenburg, GermanyMethodsPlant species lists for 183 forest patches (0.08–12.7 ha) were compiled. We conducted a hierarchical partitioning analysis to test which of the four patch variables – configuration, quality, heterogeneity and history – explained most of the variance in plant species richness and richness of various plant groups.ResultsIrrespective of patch size class, species richness is mainly predicted by patch quality and heterogeneity. In particular, generalists are primarily affected by the soil moisture and nutrient level, and specialists additionally by patch heterogeneity and history. A higher historical habitat quality, together with long habitat continuity, led to an increase in forest specialists and geophytes in all patches. In the >5‐ha patches only historical habitat quality accounted for a significant increase in the number of species with short‐distance dispersal capacity in all species. Regardless of patch size, the number of locally infrequent species increased significantly with historical habitat quality. The effect of patch configuration was negligible, except for space‐filling trees and shrubs, when considering all patches.ConclusionsOur more comprehensive statistical approach shows, in general, that all complex variables have an effect on species richness and should be considered in future studies. The fact that patch heterogeneity and quality are the main predictors of species richness indicates that very small forest patches covered a range of highly structured patches and sites having various growth conditions. We assume that the century‐old tradition of private ownership with smallholder social structure is the main reason for variability in stand structure and species assemblage, resulting in the uniqueness of each patch. Since the number of locally infrequent plant species increases significantly with historical habitat quality, we suggest that it is particularly important to consider this variable in future studies on the decline of infrequent plant species.

Extinction debt for plants and flower‐visiting insects in landscapes with contrasting land use history

AbstractAimSpecies are lost world‐wide because of habitat destruction and fragmentation. Impacted communities can exhibit transient dynamics in response to such environmental changes, where slow extinctions and immigration delay the arrival to a new equilibrium. Life history traits such as generation time, resource use and dispersal capacity, as well as landscape history can be expected to affect possible extinction debt, but few have examined this for multiple taxa in the same study and particularly so for arthropods. The aim was to assess under which current and historical land use circumstances an extinction debt occurs for vascular plants and three insect taxa.LocationSouth‐eastern Sweden.MethodWe sampled current species richness of habitat specialist and generalist butterflies, bees, hoverflies, and vascular plants in 45 dry to mesic semi‐natural grassland fragments of various size and degree of connectivity, and situated in landscapes with contrasting land use conversion history. Habitat loss was estimated in each landscape by comparing modern maps to ~45 year old digitized aerial photographs. An extinction debt can be assumed if historical habitat size and connectivity better explain current species distribution than current habitat variables do.ResultsBees responded rapidly to habitat loss possibly as a result of their primary nesting resource being destroyed. Interestingly, species richness of specialist plants was best explained by historical habitat connectivity, richness of hoverflies by historical habitat area, and richness of butterflies by both historical habitat area and connectivity, indicating extinction debt for these taxa. Habitat generalist butterflies and hoverflies, but not plants and bees, exhibited extinction debt mainly in relation to habitat area. No effect of landscape type was found on the observed extinction debt.Main conclusionsSlow extinctions of persistent and long‐lived plants might explain extinction debt for both plants and herbivorous insects linked to these plants.

Multilocus phylogeography and morphology give insights into the recent evolution of a Mexican endemic songbird:Vireo hypochryseus

We used multilocus phylogeographic analyses, morphometric measurements, and environmental niche models (ENMs) to analyze the recent evolution of the golden vireoVireo hypochryseus, a Mexican endemic species.Vireo hypochryseusis made up of two phylogeographically structured mitochondrial DNA clades that probably diverged 132 000 yr ago. One clade comprised individuals from mainland Sinaloa and the Tres Marías islands in the northwest, and the other included individuals from the remaining range of the species. This marked phylogeographic structure contrasts with the low genetic structure reported for temperate North American vireos. The nuclear DNA markers also showed some geographic differences in allele frequency, but did not exhibit a clear phylogeographic structure. The morphometric analyses suggested a decreasing north to south cline, with the largest individuals located in the Tres Marías islands. The ENMs did not support a scenario of geographic fragmentation of the environmental conditions of the area in whichV. hypochryseushas inhabited over the last 130 000 yr. However, a model of isolation by resistance based on the actual configuration of climatic conditions in western Mexico did explain a major proportion of both the mitochondrial DNA distances and the differences in size, while a model of isolation by distance explain a low proportion of such differences. Therefore, the recent history ofV. hypochryseuswas likely shaped by historical habitat fragmentation due to fluctuating environmental conditions in the mainland that produced a phylogeographic print, and natural selection on morphological traits in the insular population, suggesting an active diversification of endemic lineages in the Mexican dry forest.

The influence of contemporary and historic landscape features on the genetic structure of the sand dune endemic, Cirsium pitcheri (Asteraceae)

Narrow endemics are at risk from climate change because of their restricted habitat preferences, lower colonization ability and dispersal distances. Landscape genetics combines new tools and analyses that allow us to test how both past and present landscape features have facilitated or hindered previous range expansion and local migration patterns, and thereby identifying potential limitations to future range shifts. We have compared current and historic habitat corridors in Cirsium pitcheri, an endemic of the linear dune ecosystem of the Great Lakes, to determine the relative contributions of contemporary migration and post-glacial range expansion on genetic structure. We used seven microsatellite loci to characterize the genetic structure for 24 populations of Cirsium pitcheri, spanning the center to periphery of the range. We tested genetic distance against different measures of geographic distance and landscape permeability, based on contemporary and historic landscape features. We found moderate genetic structure (Fst=0.14), and a north-south pattern to the distribution of genetic diversity and inbreeding, with northern populations having the highest diversity and lowest levels of inbreeding. High allelic diversity, small average pairwise distances and mixed genetic clusters identified in Structure suggest that populations in the center of the range represent the point of entry to the Lake Michigan and a refugium of diversity for this species. A strong association between genetic distances and lake-level changes suggests that historic lake fluctuations best explain the broad geographic patterns, and sandy habitat best explains local patterns of movement.

Reconstructing historical habitat data with predictive models

Historical vegetation data are important to ecological studies, as many structuring processes operate at long time scales, from decades to centuries. Capturing the pattern of variability within a system (enough to declare a significant change from past to present) relies on correct assumptions about the temporal scale of the processes involved. Sufficient long-term data are often lacking, and current techniques have their weaknesses. To address this concern, we constructed multistate and artificial neural network models (ANN) to provide fore- and hindcast vegetation communities considered critical foraging habitat for an endangered bird, the Florida Snail Kite (Rostrhamus sociabilis). Multistate models were not able to hindcast due to our data not satisfying a detailed balance requirement for time reversibility in Markovian dynamics. Multistate models were useful for forecasting and providing environmental variables for the ANN. Results from our ANN hindcast closely mirrored the population collapse of the Snail Kite population using only environmental data to inform the model. The parallel between the two gives us confidence in the hindcasting results and their use in future demographic models.

Black bears in Mexico, an update of literature review

Black bears are widely distributed in North America; historically their range included most of northern Mexico. By the middle of the twentieth-century their distribution was reduced to about 20% and by 1994, black bears were classified as endangered. In recent years, however, there has been an increase in the number of black bears sightings in some of their historic distribution, suggesting that black bears in Mexico may be dispersing and recovering historical habitats. In spite of the fact that the black bear is one of the important mammals that inhabits Mexican territory, there is little knowledge concerning its life history. We present information about black bear presence in the Sierra Madre Occidental and Sierra Madre Oriental. Also, we present a review of available research results on habitat, diet and population density. We include a review of peer-reviewed publications, theses, and grey literature, some of which are available only in Spanish. Our goal is to present a country-wide overview to show where studies of black bears have been conducted, where there is need for further research, and to make the information available for researchers in and outside of Mexico. Key words: current distribution, historical review, Ursus americanus

Still a one species genus? Strong genetic diversification in the world’s largest living odonate, the Neotropical damselfly Megaloprepus caerulatus

Mesoamerican biodiversity is increasingly threatened by anthropogenic destruction of natural land cover. Habitat degradation and climate change are primary threats to specialized forest odonate species that are important model organisms for forest health and defining conservation units. The extreme niche specialization of Megaloprepus caerulatus, the world’s largest extant odonate, makes it well suited as an indicator for changing environmental conditions. Megaloprepus, which is considered to be a monospecific genus, is highly dependent on old growth forests whose water filled tree holes are limiting reproductive resources for this species. Here, we focus on the question how historical and recent fragmentation events, strong niche conservatism and ecological conditions have affected population dynamics, viability and the species status in this evolutionarily old genus. Two mitochondrial sequence markers (ND1 and 16S rRNA) and a set of microsatellites were used to analyze population structure and genetic diversity of M. caerulatus in the northern part of its distributional range. Results suggested an absence of gene flow and no shared haplotypes among the study populations. Statistical parsimony indicated high sub-structuring among populations with sequence diversity similar to levels found at the species level compared to other odonates. In sum, the genetic data suggest that Megaloprepus may actually consist of more than one species. The taxonomic status of the group should be revised in light of the three distinct genetic clusters found in different forest regions. The results may also allow insights into the impact of recent and historical habitat fragmentation on a strong Neotropical forest restricted insect species.

Explosive diversification following a benthic to pelagic shift in freshwater fishes

BackgroundInterspecific divergence along a benthic to pelagic habitat axis is ubiquitous in freshwater fishes inhabiting lentic environments. In this study, we examined the influence of this habitat axis on the macroevolution of a diverse, lotic radiation using mtDNA and nDNA phylogenies for eastern North America’s most species-rich freshwater fish clade, the open posterior myodome (OPM) cyprinids. We used ancestral state reconstruction to identify the earliest benthic to pelagic transition in this group and generated fossil-calibrated estimates of when this shift occurred. This transition could have represented evolution into a novel adaptive zone, and therefore, we tested for a period of accelerated lineage accumulation after this historical habitat shift.ResultsAncestral state reconstructions inferred a similar and concordant region of our mtDNA and nDNA based gene trees as representing the shift from benthic to pelagic habitats in the OPM clade. Two independent tests conducted on each gene tree suggested an increased diversification rate after this inferred habitat transition. Furthermore, lineage through time analyses indicated rapid early cladogenesis in the clade arising after the benthic to pelagic shift.ConclusionsA burst of diversification followed the earliest benthic to pelagic transition during the radiation of OPM cyprinids in eastern North America. As such, the benthic/pelagic habitat axis has likely influenced the generation of biodiversity across disparate freshwater ecosystems.

Implications of Time-Averaged Death Assemblages for Ecology and Conservation Biology

Biologists increasingly appreciate the importance of community-level attributes in the functioning and temporal turnover of ecosystems, but data other than species richness are difficult to acquire over the habitat-to-regional and decadal-to-millennial scales needed to recognize biodiversity change, discriminate between natural and anthropogenic drivers, and inform theoretical and applied ecology. Death assemblages (DAs)—the actively accumulating organic remains encountered in present-day seabeds and landscapes, as distinct from permanently buried fossil assemblages—are an underexploited source of historical information at precisely these scales. Meta-analyses, dynamic modeling, and individual case studies, particularly of mollusks and mammals, reveal that DAs differ from censused living assemblages (LAs) primarily because they are temporally coarse, time-averaged samples, contrary to concerns that postmortem bias dominates. Temporal pooling predictably damps the ability of DAs to detect small-scale variation, but promotes their ability to inventory rare species; estimate the abundance structure of the metacommunity; document range changes; evaluate historic habitat use; and identify now-absent species, community states, and anthropogenically shifted baselines.

Upland Habitat Quality and Historic Landscape Composition Influence Genetic Variation of a Pond-Breeding Salamander

Understanding the temporal and spatial scale at which habitat alteration impacts populations is important for conservation and management. Amphibians have declined more than other vertebrates, and pond-breeding species are particularly susceptible to habitat loss and fragmentation because they have terrestrial and aquatic life stages. One approach to management of pond-breeding species is protection of core upland habitat surrounding the breeding pond. We used genetic variation as an indicator of population status in a common amphibian species, spotted salamanders (Ambystoma maculatum), to determine how amount of suitable upland habitat relates to population status in the greater Charlotte, North Carolina, USA metropolitan area. We developed candidate models to evaluate the relative influence of historical and contemporary forested habitat availability on population genetic variation at two spatial scales of upland area (164 m and 2000 m) at four time intervals over the past seven decades (1938, 1978, 1993, 2005). We found that historical land cover best predicted contemporary allelic richness. Inbreeding coefficient and observed heterozygosity were not effectively predicted by forest cover at either spatial or temporal scales. Allelic richness was best predicted at the smaller spatial scale in the 1993 time interval. Predicting and understanding how future landscape configuration affects genetic variation of common and rare species is imperative for the conservation of amphibian and other wildlife populations.

Ghost of habitat past: historic habitat affects the contemporary distribution of giant garter snakes in a modified landscape

Historic habitat conditions can affect contemporary communities and populations, but most studies of historic habitat are based on the reduction in habitat extent or connectivity. Little is known about the effects of historic habitat on contemporary species distributions when historic habitat has been nearly completely removed, but species persist in a highly altered landscape. More than 93% of the historic wetlands in the Central Valley of California, USA, have been drained and converted to agricultural and other uses, but agricultural wetlands, such as rice and its supporting infrastructure of canals, allow some species to persist. Little is known about the distribution of giant garter snakes Thamnophis gigas, a rare aquatic snake species inhabiting this predominantly agricultural landscape, or the variables that affect where this species occurs. We used occupancy modeling to examine the distribution of giant garter snakes at the landscape scale in the Sacramento Valley (northern portion of the Central Valley) of California, with an emphasis on the relative strength of historic and contemporary variables (landscape-scale habitat, local microhabitat, vegetation composition and relative prey counts) for predicting giant garter snake occurrence. Proximity to historic marsh best explained variation in the probability of occurrence of giant garter snakes at the landscape scale, with greater probability of occurrence near historic marsh. We suspect that the importance of distance to historic marsh represents dispersal limitations of giant garter snakes. These results suggest that preserving and restoring areas near historic marsh, and minimizing activities that reduce the extent of marsh or marsh-like (e.g. rice agriculture, canal) habitats near historic marsh may be advantageous to giant garter snakes.