Higher Litter Research Articles

Genetic polymorphisms of fecundity genes in Watish Sudanese desert sheep.

Background and Aim:The Watish sheep is a strain of desert sheep of smaller size compared to other desert sheep ecotypes, and there is anecdotal evidence that it is endowed with high litter size. The present study was designed for screening for polymorphisms in the known fecundity genes (bone morphogenetic protein receptor type 1B A<G in exon 6, bone morphogenetic protein 15 (BMP15) (FecXB, FecXG, FecXH, and FecXI) in exon2, growth differentiation factor 9 (GDF9) – G1 in exon1 and G8 in exon2 and PRLG<A in intron2) and their association with litter size in Watish.Materials and Methods:The study involved 156 Watish ewes of 2-6 years of age, along with data on litter size in the first, second, and third parity from Sinnar state and contiguous Blue Nile State. Genomic DNA was isolated and genotyped using polymerase chain reaction-restriction fragment length polymorphism. Allele and genotype frequencies were calculated by direct counting. Chi-square test for goodness of fit was performed for agreement with Hardy-Weinberg expectations and association testing.Results:The results demonstrated that all individuals were non-carriers for the target mutations of FecB, BMP15 (FecXB, FecXH, and FecXI), and GDF9-G8. With regard to the GDF9-G1 gene, the genotypic frequencies were 0.07% (G+) and 0.93% (++), in FecXG gene they were 0.993% (++) and 0.006% (B+), in PRL gene 0.516(++), 0.347(B+), and 0.137(BB). The Chi-square test showed a non-significant association between ewe’s type of birth and the detected mutations genotypes.Conclusion:These results preliminarily indicated that GDF9-G1, BMP15 (FecXG), and PRL genes might have had some contribution for improving litter size in Watish Sudanese sheep. However, further studies using larger samples are needed to detect the effects of those mutations on Watish sheep litter size.

Effect of litter size on prepartum metabolic and amino acidic profile in rabbit does

The use of modern prolific lines of rabbit does in intensive production systems leads to an increase in productivity but also causes a rise in several problems related to the does’ health status. Hence, the aim of this study was to investigate the effect of the litter size on the metabolic, inflammatory and plasma amino acid profile in rabbit does. The blood of 30 pregnant does was sampled on the 27th day of pregnancy. The does were retrospectively grouped according to the number of offspring into a high litter size group (HI, does with ≥ 12 kits; n= 16) and a low litter size group (LO, does with ≤ 11 kits; n= 14). Data were subjected to Pearson’s correlation analysis. Further, data were analysed in agreement to a completely randomized design in which the main tested effect was litter size. The linear or quadratic trends of litter size on parameters of interests were post hoccompared by using orthogonal contrasts. In addition, compared with the LO group, the HI group had lower levels of glucose (−5%; P< 0.01), zinc (−19%; P< 0.05), albumin (−6%; P< 0.05) and total cholesterol (−13%; P< 0.07), but the total bilirubin level was higher in the HI group (+14%; P< 0.05). Regarding the plasma amino acids, the HI group had lower concentrations of threonine (−15%), glycine (−16%), lysine (−16%) and tryptophan (−26%) and a higher level of glutamic acid (+43%; P< 0.05) compared with the LO group. The exclusively ketogenic amount of amino acids was lower (P< 0.06) in the HI (55.8 mg/100 ml) does compared with the LO does (56.8 mg/100 ml). These results show that a few days before delivery, rabbit does that gave birth to a higher number of offspring had a metabolic profile and an inflammatory status that was less favourable with respect to does who gave birth to a lower number of offspring. Moreover, the plasma amino acid profile points out that there was an enhanced catabolic condition in the rabbit does with a high number of gestated foetuses; it was likely related to the greater energy demand needed to support the pregnancy and an early inflammatory response.

Increased number of large non-atretic follicles and co-dominance effects account for high litter sizes in Bonga sheep.

To understand the ovarian basis for prolificacy of Bonga sheep, a total of 31 ewes were selected based on litter size (LS) records and divided into two groups: High Prolificacy (HP) (n=20) with LS≥2 and Low Prolificacy (LP) (n=11) with LS=1. At a synchronized estrus, follicular dynamics were determined using transrectal ultrasonography. Plasma estradiol concentrations were also monitored. In total 27 ewes were observed in estrus being 9/11 LP (82%) and 18/20 HP (90%). On the day of estrus (day 0), the mean number of large follicles was higher (p<.05) in HP (1.78±0.19) than in LP (1.0±0.28) ewes. Prior to estrus, more (p<.05) medium follicles were visible for HP compared to LP ewes. Plasma estradiol concentrations were higher in HP compared to LP ewes (18.91±0.41 vs. 14.51±0.65pg/ml; p<.05) and similarly was ovulation number (2.3±0.15 vs. 1.28±0. 14; p<.05). Higher ovulation rates and litter size in Bonga sheep are evidenced by the previous presence of more large follicles and the existence of co-dominance effects as most likely medium follicles are selected to ovulate.

Neglected but Potent Dry Forest Players: Ecological Role and Ecosystem Service Provision of Biological Soil Crusts in the Human-Modified Caatinga

Biological soil crusts (biocrusts) have been recognized as key ecological players in arid and semiarid regions at both local and global scales. They are important biodiversity components, provide critical ecosystem services, and strongly influence soil-plant relationships, and successional trajectories via facilitative, competitive, and edaphic engineering effects. Despite these important ecological roles, very little is known about biocrusts in seasonally dry tropical forests. Here we present a first baseline study on biocrust cover and ecosystem service provision in a human-modified landscape of the Brazilian Caatinga, South America's largest tropical dry forest. More specifically, we explored (1) across a network of 34 0.1 ha permanent plots the impact of disturbance, soil, precipitation, and vegetation-related parameters on biocrust cover in different stages of forest regeneration, and (2) the effect of disturbance on species composition, growth and soil organic carbon sequestration comparing early and late successional communities in two case study sites at opposite ends of the disturbance gradient. Our findings revealed that biocrusts are a conspicuous component of the Caatinga ecosystem with at least 50 different taxa of cyanobacteria, algae, lichens and bryophytes (cyanobacteria and bryophytes dominating) covering nearly 10% of the total land surface and doubling soil organic carbon content relative to bare topsoil. High litter cover, high disturbance by goats, and low soil compaction were the leading drivers for reduced biocrust cover, while precipitation was not associated Second-growth forests supported anequally spaced biocrust cover, while in old-growth-forests biocrust cover was patchy. Disturbance reduced biocrust growth by two thirds and carbon sequestration by half. In synthesis, biocrusts increase soil organic carbon (SOC) in dry forests and as they double the SOC content in disturbed areas, may be capable of counterbalancing disturbance-induced soil degradation in this ecosystem. As they fix and fertilize depauperated soils, they may play a substantial role in vegetation regeneration in the human-modified Caatinga, and may have an extended ecological role due to the ever-increasing human encroachment on natural landscapes. Even though biocrusts benefit from human presence in dry forests, high levels of anthropogenic disturbance could threaten biocrust-provided ecosystem services, and call for further, in-depth studies to elucidate the underlying mechanisms.

Post-fire fuel succession in a rare California, USA, closed-cone conifer

BackgroundIncreasing frequency and size of wildfires over the past few decades have prompted concerns that populations of obligate seeding species may be vulnerable to repeat, short-interval fires that occur prior to these species reaching maturity. The susceptibility of populations to this risk is partially dependent on the amount and characteristics of fuel loading over time and their influence on fire behavior and effects. This study characterized fuel dynamics and modeled fire behavior across a time-since-fire chronosequence in stands of the rare, serotinous conifer, Baker cypress (Hesperocyparis bakeri [Jeps.] Bartel), ranging in age between 3 and 147 years post fire.ResultsLitter and fine woody fuel loading (1- to 100-hour) were highest in the 10-year-old and 147-year-old stands, while coarse fuel loading (1000-hour) peaked in the 10-year-old stand and subsequently decreased with time since fire. Duff loading consistently increased with time since fire. Cone production had not occurred in the first 10 yr of stand development. Foliar moisture content in Baker cypress was inversely correlated with stand age, and older foliage had lower moisture content than younger foliage. Modeled surface fire behavior was highest in the 10-year-old and 107-year-old stands in accordance with higher litter, fine woody fuel, or shrub fuel accumulation. While foliar moisture content was higher in younger stands and influenced the critical fireline intensity, we did not observe changes in fire type.ConclusionsFine-fuel loading in Baker cypress stands followed a U-shaped pattern over time (first decreasing, then stable, then increasing), consistent with findings in other forests with stand-replacing fire regimes. Our results indicated that early-successional stages of Baker cypress forests have sufficient fuels to allow for the spread of wildfire and 10-year-old stands could burn with substantive fire behavior prior to cone production. Whenever possible, we recommend suppressing wildfire in stands less than 20 yr old to avoid substantial decreases or local extirpation of these rare Baker cypress populations. Our results highlight the importance of knowing the cone production patterns, fuel dynamics, and corresponding fire behavior over the development of obligate-seeder species to assess the risk of population loss due to short-interval fires.

Identification of novel genes associated with litter size of indigenous sheep population in Xinjiang, China using specific-locus amplified fragment sequencing technology.

BackgroundThere are abundant sheep breed resources in the Xinjiang region of China attributing to its diverse ecological system, which include several high-litter size sheep populations. Previous studies have confirmed that the major high prolificacy gene cannot be used to detect high litter size. Our research team found a resource group in Pishan County, southern Xinjiang. It showed high fertility with an average litter size of two to four in one birth, excellent breast development, and a high survival rate of lambs. In the present study, we used this resource as an ideal sample for studying the genetic mechanisms of high prolificacy in sheep.MethodsIndigenous sheep populations from Xinjiang, with different litter sizes, were selected for the research, and specific-locus amplified fragment sequencing (SLAF-seq) technology was used to comprehensively screen single nucleotide polymorphisms (SNPs) from the whole genome that may cause differences in litter size. Novel genes associated with litter size of sheep were detected using genome-wide association studies (GWAS), providing new clues revealing the regulation mechanism of sheep fecundity. Candidate genes related to ovulation and litter size were selected for verification using Kompetitive Allele Specific polymerase chain reaction (KASP) cluster analysis.ResultsWe identified 685,300 SNPs using the SLAF-seq technique for subsequent genome-wide analysis. Subsequently, 155 SNPs were detected at the genome-wide level. Fourteen genes related to sheep reproduction were notated: COIL, SLK, FSHR, Plxna3, Ddx24, CXCL12, Pla2g7, ATP5F1A, KERA, GUCY1A1, LOC101107541, LOC101107119, LOC101107809, and BRAF. Based on literature reports, 30 loci of seven genes and candidate genes (CXCL12, FSHR, SLK, GUCY1A1, COIL, LOC101107541, and LOC101107119) related to ovulation and litter size were selected for verification using KASP cluster analysis. Among them, nine loci of three genes were successfully genotyped. Three loci of FSHR (GenBank ID: 443299, g. 75320741G>A site), GUCY1A1 (GenBank ID: 101110000, g. 43266624C>T site), and COIL (GenBank ID: 101123134, g. 7321466C>G site) were found to be significantly or extremely significantly associated with litter size. These three loci are expected to be used as molecular markers to determine differences in litter size in sheep.

Decomposition of beech leaves and roots in the topsoil and subsoil of a sandy Cambisol: Results of a one-year incubation

The fate of litter is regulated by its quality and quantity, the activity of soil microorganisms and edaphic conditions. Despite edaphic conditions differing between topsoils and subsoils in availability of water and oxygen, nutrient content and microbial activity, the effects of soil depth on litter decomposition are seldom investigated. The present work studied the mineralization of beech leaf litter (C/N = 28, collected after litterfall) and fine roots ((C/N = 45, taken from living trees) in two soil depths (2–10 cm vs 145–153 cm). Both plant materials were air-dried, cut to <2 mm, applied at a rate of 8 g kg−1 to the sandy Cambisol and incubated for 300 days at 10 °C.The cumulative CO2 emission from leaf decomposed in the subsoil (400–450 mg C g−1 soil) was 1.6 times higher than from the roots (p < 0.05), whereas no differences were found between litter types for the topsoil (500–600 mg C g−1 soil). Microorganisms in the topsoil were generally adapted to the high litter input and were not limited by nutrients, as indicated by the absence of a litter quality effect on the microbial biomass carbon (MBC) (estimated by fumigation extraction) content here (p > 0.05). In contrast, subsoil MBC was higher after leaf addition than root addition (750 vs. 200 mg kg−1 soil, p < 0.05). Thus, both the residue quality and its location in the soil profile (topsoil/subsoil) should be considered when studying the fate of plant litter in detritusphere hotspots.

Litter accumulation and biomass dynamics in riparian zones in tropical South America of the Asian invasive plant Hedychium coronarium J. König (Zingiberaceae)

ABSTRACTBackground: Promoting changes in abiotic conditions and ecosystem processes, such as decomposition, is a mechanism by which some exotic plant species displace native plants and become invasive.Aims: We monitored ramets of Hedychium coronarium over 30 months to estimate the litter decay rate, biomass dynamics and litter accumulation over time in riparian sites invaded by the species in southeastern Brazil.Methods: We measured the number, height, emergence and mortality of ramets in three environments invaded by H. coronarium (natural, rural and urban). We also measured litter decay in situ and in in vitro experiments. We used sinusoidal models to describe height fluctuation and exponential models to simulate litter decay and litter accumulation.Results: Ramets of H. coronarium showed high seasonal variation in terms of height and emergence, as well as low litter decay. Accordingly, our models predicted high litter production and a seasonal pattern of litter accumulation in invaded sites.Conclusions: H. coronarium produces a great amount of litter, which shows slow decay and hence seems to affect decomposition processes. Investigating seasonal variation on the effects of invasive species on ecosystem functioning shed light on the factors driving the success and impact of invasive plants.

Relationship between mitochondrial DNA haplogroup and litter size in the pig.

Mitochondrial DNA (mtDNA) has been widely associated with complex traits in farm animals. The present study evaluated the effects of mtDNA on litter size in pigs. Mitogenome sequencing of 1017 sows distinguished 232 variations, including 229 single nucleotide polymorphisms and three indels, which constituted 11 haplotypes and further clustered into two haplogroups that differed significantly (P<0.05) in litter size. In order to explain the associations between the effect of haplogroup on litter size and different maternal origins, extant mitogenome sequences were used for phylogenetic or principal component analyses. The results of these analyses led to the identification of two groups, representing Chinese and European origins. The haplotypes corresponding to high litter size were all in the Chinese cluster, whereas haplotypes corresponding to low litter size were all in the European cluster. The results of this study suggest that the effect of haplogroup on litter size in the pig could be caused by diverse maternal origins, and that mtDNA haplogroup may be a marker for genetic selection for pig litter size.

Litter Production and Accumulation as an Indicator of Degradation in Caatinga

The ecosystem processes in the caatinga, such as litter dynamic, are threatened and little is known about it in these environments. The litter processes can be used as indicators of degradation or recovery of an ecosystem because these processes react to changes in the ecosystems. The litterfall deposition was collected monthly over 23 months in collectors of 1.0 m2. The litter accumulation on soil was collected monthly over 23 months in frames of 0.25 m2. The coefficient of decomposition (K) was estimated by the relation between annual litter production and litter stock in the soil surface. Annual litterfall production increased with stand age. Total annual litter production in different age stands varies from 1.37 Mg ha-1 in the 15 years to 2.37 Mg ha-1 in the 50 years stand. K and renewal times were also significantly different among the sites. K was higher in 50 years, followed by 30 years and 15 years. There were a higher litter production and accumulation in the older stands. The older stands presented faster litter decomposition and renew, which evidences a better utilization of litter in the nutrient cycling process and the incorporation of organic matter into the soil. These results show that litter processes are effective indicators of the stage of degradation in a caatinga ecosystem.

Type conversion from native California sage scrub to non-native grassland accelerates decomposition processes

Predicting how plant invasions influence decomposition processes is difficult, as multiple factors change with plant community alteration. Here, we examined the importance of various abiotic and biotic factors (litter quality (C:N), UV radiation, and macroinvertebrate access) in driving early decomposition processes in native California sage scrub (CSS) and in adjacent non-native grassland habitats. Many findings from our experiment were consistent with studies from semi-arid regions (e.g., UV radiation drove decomposition processes and high quality litter decayed more rapidly). However, the acceleration of litter decomposition in the non-native grassland relative to native California sage scrub (CSS) was unexpected and contrasts with studies of partially invaded CSS systems. Our results highlight that studies of invaded systems that still retain native species diversity should not be extrapolated to type-converted systems. We hypothesize that high grass cover in the type-converted grassland created conditions that enhanced soil moisture, bacterial abundance, and macroinvertebrate influence relative to the CSS, accelerating decomposition and reducing regional C storage.

Potential of coconut water to enhance fresh semen quality and fertility in rabbits.

Coconut water as a natural diluent was evaluated on rabbit semen quality, conception and litter size in artificially inseminated does. A total of 10 bucks and 90 does, all crossbred New Zealand White × chinchilla, were used for the trial. Pooled semen was obtained from bucks using artificial vagina. Semen diluents were prepared at 0%, 20%, 40%, 60% and 80% and control 50% normal saline and designated as T1, T2, T3, T4, T5 and T6 respectively, in a completely randomised design. Semen analysis was conducted on fresh semen and the various diluted semen immediately at 37°C. Fifteen does each were randomly allotted to the different treatment and were inseminated with their respective treatment diluted semen using the standard procedure, and conception rate, litter size and productivity index at birth were assessed at kindling. Result obtained revealed that spermatozoa motility and structural membrane integrity of the diluted semen were significantly (p < 0.05) affected by the percentage of dilution. The range of values obtained for spermatozoa motility, structural membrane integrity and acrosome integrity is within the accepted values for good-quality semen. Conception rate, litter size and productivity index at birth were highest in does inseminate with T4 (60%), and the least values were obtained in T5 (80%). In conclusion, coconut water is a suitable diluent for rabbit semen for on-farm artificial insemination, the optimal dilution rate of coconut water in rabbit semen is 60%, which guarantees high conception, litter size and productivity index at birth.

High-yielding lactating sows maintained a high litter growth when fed reduced crude protein, crystalline amino acid-supplemented diets

The study was conducted to determine the optimal standardized ileal digestible (SID) CP level to maximize litter gain in high-yielding lactating sows when feeding reduced CP, crystalline amino acid-supplemented diets. In total, 520 Landrace × Yorkshire sows (parity 1 to 5) were allocated to 1 of 6 diets from day 2 post-partum when litters were standardized to 14 piglets. All diets were formulated to meet or slightly exceed Danish recommendations for Lys, Met, Met + Cys, Thr and Trp using crystalline amino acids. Diets contained 116, 126, 132, 138, 144, and 153 g SID CP per kg (as-fed). Sow body weight, back fat thickness, and litter weight were recorded at litter standardization and at weaning. On a subsample of 72 sows (parity 2 to 4), milk samples were collected at day 3, 10 and 17 post-partum, and blood was sampled at day 10 and 17 post-partum. All data were subjected to ANOVA using the MIXED procedure in SAS. Litter size at weaning was not affected by the dietary CP content (13.0 ± 0.06; P = 0.40), nor was litter ADG (3.13 ± 0.03 kg/d; P = 0.52), nor milk contents of fat and lactose (P > 0.05). Likewise, the daily changes in sow body weight (−0.58 ± 0.04 kg/d, P = 0.44) and back fat thickness (−0.15 ± 0.004 mm/d, P = 0.20) were similar across dietary treatments. Milk protein (P < 0.01), milk Lys (P < 0.05), and other essential amino acids in milk protein were reduced at a SID CP concentration of 116 g/kg. Plasma concentrations of NEFA and creatinine were not affected by dietary treatment (P > 0.05), but concentrations of plasma urea nitrogen were elevated (P < 0.001) as dietary CP content increased. In conclusion, sows were able to maintain a high litter growth when fed reduced CP, crystalline amino acid-supplemented diets. Though, it is not recommended to feed the lactating sows less than 126 g SID CP/kg (as-fed).

Ecohydrological function of vegetation patches in semi-arid shrublands of central Mexico

Vegetation patterns in arid and semi-arid regions create source–sink systems with vegetated patches capturing the resources produced by inter-patches. Patches and inter-patches are the fundamental hydrological units, and their properties can be scaled up to describe ecohydrological functioning at the hillslope or catchment levels. The objective was to compare ecohydrological properties at the patch level in relation to ground cover and at the vegetation type level using landscape function analysis (LFA). Runoff and sediment production were measured in vegetation types of rosetophilous desert shrubland, microphyllous desert shrubland, and crassicaulescent shrubland. Inter-patches (cover = 12.54% ± 2.35% SE) had the highest runoff rates and sediment production, while medium coverage patches (cover = 43.68% ± 2.37% SE) and dense cover patches (cover = 83.56% ± 2.48% SE) produced less runoff and sediments. Runoff, sediments and landscape organization were similar between vegetation types. High litter and stone fragment cover and low soil bulk density were associated with low runoff and sediment production. The LFA infiltration and stability indices explained 10 and 19% of the variability of infiltration and sediment production, respectively. Our results show that vegetation types function similarly, but the hydrological and erosional responses of patches and inter-patches are fundamental to supporting ecohydrologically-based management and restoration plans.

Litter quality and microtopography as key drivers to topsoil properties and understorey plant diversity in ancient broadleaved forests on decalcified marl

In forest ecosystems, litter quality is a major driver for soil and understorey characteristics, but elevation, microtopography and subsoil properties may also be important. We tested the importance of each factor in two ancient mixed forests on decalcified marl, dominated by trees with different litter quality such as European hornbeam, with high-palatable litter, and beech, with low-palatable litter. We mapped elevation, differences in local height (microtopography), tree distribution and understorey cover on slopes ranging from crest to bottom, and sampled 200 7 × 7 m grid cells for characteristics of litter input, understorey, topsoil and subsoil. In both forests, elevation decreased gradually, but microtopography showed irregular patterns of depressions and mounds of a few cm below or above average local height. Tree distribution was not affected by elevation or subsoil properties, but clearly by microtopography. Adult beech was abundant on local mounds, while hornbeam was more common in local depressions. Topsoil and understorey characteristics were mainly affected by litter quality (tree species dominance) and microtopography. Litter quality had separate effects from microtopography, but could reinforce this. High litter quality (hornbeam) and low local height both led to high earthworm activity, low litter mass, high erosion, impermeable clay layers close to the surface, high pH, high soil moisture and high diversity of the understorey. Low litter quality (beech) and high local height both led to low earthworm activity, high litter mass, low erosion, low pH, low soil moisture and low plant diversity. Beech and hornbeam may act as ecosystem engineers, which change habitat conditions and local hydrology, and make habitats more suitable to themselves, and/or unsuitable to the other. However, they also increased spatial complexity of the forest and length of the habitat gradient. This may increase forest biodiversity as a whole, but also resilience to prolonged wet or dry periods.

Opposing Effects of Plant-Community Assembly Maintain Constant Litter Decomposition over Grasslands Aged from 1 to 25 Years

Litter decomposition is central to ecosystem functioning and depends, under constant abiotic conditions, on litter quality and decomposer activity. During the assembly of a plant community following disturbance, litter quality is expected to decrease, due to an increasing proportion of resource-conservative species, whereas decomposer activity is expected to increase, due to the establishment of decomposer populations and their response to local vegetation (“home-field advantage”, HFA). To date, the combined effect of these processes remains poorly understood. We studied 27 seminatural grasslands in western France, ranging from 1 to 25 years since last cultivation. We measured the functional composition of plant communities using litter traits (specific leaf area, leaf dry matter content, C/N ratio, phenolics), characterized the entire community of decomposers (macrofauna, mesofauna, microbes) and performed reciprocal litter transplants to quantify HFA. We found that, overall, decomposition was rapid, and HFA was not evident. While there was substantial among-grassland variation in decomposition and HFA, neither changed with grassland age. Litter quality and decomposer efficiency also remained, overall, unchanged. However, grassland age determined all measured litter traits and caused soil microbial C/N ratio to decline. Although these changes impacted decomposition individually, together they canceled out each other, resulting in constant decomposition across the chronosequence. Our results suggest that processes driving decomposition differ during grassland succession and suggest that HFA may be lower in communities with high litter quality. Moreover, simultaneous assembly processes have opposing and therefore stabilizing effects on decomposition, possibly explaining the outstanding resilience of primary production in temperate grassland ecosystems.

Litter Quality Modulates Effects of Dissolved Nitrogen on Leaf Decomposition by Stream Microbial Communities.

Rates of leaf litter decomposition in streams are strongly influenced both by inorganic nutrients dissolved in stream water and by litter traits such as lignin, nitrogen (N) and phosphorus (P) concentrations. As a result, decomposition rates of different leaf species can show contrasting responses to stream nutrient enrichment resulting from human activities. It is unclear, however, whether the root cause of such discrepancies in field observations is the interspecific variation in either litter nutrient or litter lignin concentrations. To address this question, we conducted a controlled laboratory experiment with a known fungal community to determine decomposition rates of 38 leaf species exhibiting contrasting litter traits (N, P and lignin concentrations), which were exposed to 8 levels of dissolved N concentrations representative of field conditions across European streams (0.07 to 8.96mgNL-1). The effect of N enrichment on decomposition rate was modelled using Monod kinetics to quantify N effects across litter species. Lignin concentration was the most important litter trait determining decomposition rates and their response to N enrichment. In particular, increasing dissolved N supply from 0.1 to 3.0mgNL-1 accelerated the decomposition of lignin-poor litter (e.g. < 10% of lignin, 2.9× increase ± 1.4 SD, n = 14) more strongly than that of litter rich in lignin (e.g. > 15% of lignin, 1.4× increase ± 0.2 SD, n = 9). Litter nutrient concentrations were less important, with a slight positive effect of P on decomposition rates and no effect of litter N. These results indicate that shifts in riparian vegetation towards species characterized by high litter lignin concentrations could alleviate the stimulation of C turnover by stream nutrient enrichment.

Turning Observed Founder Alleles into Expected Relationships in an Intercross Population.

Pedigree-derived relationships for individuals from an intercross of several lines cannot easily account for the segregation variance that is mainly caused by loci with alternative alleles fixed in different lines. However, when all founders are genotyped for a large number of markers, such relationships can be derived for descendants as expected genomic relationships conditional on the observed founder allele frequencies. A tabular method was derived in detail for autosomes and the X-chromosome. As a case study, we analyzed litter size and body weights at three different ages in an advanced mouse intercross (29 generations, total pedigree size 19,266) between a line selected for high litter size (FL1) and a highly inbred control line (DUKsi). Approximately 60% of the total genetic variance was due to segregation variance. Estimated heritability values were 0.20 (0.03), 0.34 (0.04), 0.23 (0.03), 0.41 (0.03) and 0.47 (0.02) for litter size, litter weight and body weight at ages of 21, 42 and 63 days, respectively (standard errors in brackets). These values were between 12% and 65% higher than observed in analyses that treated founders as unrelated. Fields of applications include experimental populations (selection experiments or advanced intercross lines) with a limited number of founders, which can be genotyped at a reasonable cost. In principle any number of founder lines can be treated. Additional genotypes from individuals in later generations can be combined into a joint relationship matrix by capitalizing on previously published approaches.

Nitrogen deposition effect on forest litter decomposition is interactively regulated by endogenous litter quality and exogenous resource supply

Atmospheric nitrogen (N) deposition affects litter decomposition. However, how endogenous litter quality and exogenous resource supply alter the N deposition effect on litter decomposition and deposited N immobilized by microbes remains unclear. We conducted a laboratory experiment to examine how the N deposition effect on litter decomposition varies with endogenous litter quality (needle litter with higher C/nutrients, low quality litter versus leaf litter with low C/nutrients, high quality litter) and exogenous resource supply (five treatments: N addition alone; N plus non-N nutrient and/or carbon addition; control) using a 15N tracing method. Nitrogen deposition increased the % mass and % N remaining across the decomposition process. Adding non-N nutrients increased the N deposition effect on % mass and % N remaining in the decomposing high quality litter but not in the low quality litter. Moreover, the % P remaining was increased in the low quality litter but was decreased in the high quality litter under N deposition. However, adding N and non-N nutrients together increased the % P remaining in both decomposing litters. The immobilized exogenous 15N abundance (IEN) was much higher in the decomposing low quality litter than high quality litter. For low quality litter, resource addition treatments affected IEN, but their effects depended on decomposition stages. For high quality litter, carbon addition alone generally increased IEN across the 720 days. Nitrogen deposition effect on litter decomposition could be altered by exogenous resource supply, but the pattern ultimately depended on endogenous litter quality. Nitrogen deposition generally suppressed the litter decomposition and non-N nutrients addition enhanced the inhibition effects of N deposition on litter decomposition, especially of high quality litter, while lower quality litter tended to immobilize more exogenous deposited N. Thus, the magnitude of both non-N nutrient availability and litter quality needs to be taken into consideration when assessing the effects of N deposition on litter decomposition.

Effects of Chinese fir litter cover on its seedling emergence and early growth

Litter accumulation can strongly affect seedling emergence and early growth through both physical and chemical mechanisms, and can further influence natural regeneration. Chinese fir (Cunninghamia lanceolata) is one of the most important afforestation tree species. Its natural regeneration is poor, possibly due to the thick leaf accumulation inhibiting seedling emergence and growth. We used natural and plastic litter to study the effects of Chinese fir litter on its own seedling emergence and early growth, as well as to assess whether the effect was physical or chemical. In this experiment, two litter types (natural and plastic litter) and four different litter amounts (control, 0 g·m-2; low, 200 g·m-2; medium, 400 g·m-2; high, 800 g·m-2) were used. The results showed that compared to the control (0 g·m-2), low litter amount (200 g·m-2) exerted a slight positive effect on seedling emergence, whereas high litter amount (800 g·m-2) significantly reduced the seedling emergence and survival rate in the case of both natural and plastic litter. With increasing litter amount, root length of seedlings decreased and stem length increased. The highest and lowest root mass, leaf mass, and total mass of seedlings were observed for the low and high litter amount, respectively, in the case of both natural and plastic litter. The root:shoot ratio of seedlings decreased with the increasing litter amount for both natural and plastic litter. The photosynthesis:non-photosynthesis biomass ratio of the seedlings was higher under all litter cover treatments, compared to that in the control. Because the effect of the same amounts of the natural and plastic litter on seedling emergence and early growth did not differ, the litter layer's short-term influence was primarily physical. As the litter cover increased, the initial slight positive effects on seedling emergence and early growth could shift to inhibitory effects. Moreover, to penetrate the thick litter layer, Chinese fir seedlings allocated more resources toward stems and aboveground growth. This study provided evidence for litter amount being a key ecological factor that affects the seedling development and subsequent natural regeneration of Chinese fir.