High-resolution Imaging Research Articles

Widespread 3′UTR capped RNAs derive from G-rich regions in proximity to AGO2 binding sites

Abstract The 3′ untranslated region (3′UTR) plays a crucial role in determining mRNA stability, localisation, translation and degradation. Cap analysis of gene expression (CAGE), a method for the detection of capped 5′ ends of mRNAs, additionally reveals a large number of apparently 5′ capped RNAs derived from locations within the body of the transcript, including 3′UTRs. Here, we provide direct evidence that these 3′UTR-derived RNAs are indeed capped and widespread in mammalian cells. By using a combination of AGO2 enhanced individual nucleotide resolution UV crosslinking and immunoprecipitation (eiCLIP) and CAGE following siRNA treatment, we find that these 3′UTR-derived RNAs likely originate from AGO2-binding sites, and most often occur at locations with G-rich motifs bound by the RNA-binding protein UPF1. High-resolution imaging and long-read sequencing analysis validate several 3′UTR-derived RNAs, showcase their variable abundance and show that they may not co-localise with the parental mRNAs. Taken together, we provide new insights into the origin and prevalence of 3′UTR-derived RNAs, show the utility of CAGE-seq for their genome-wide detection and provide a rich dataset for exploring new biology of a poorly understood new class of RNAs. Graphical Abstract Schematic representation of the proposed model where 3′UTR-derived RNAs originate from G-rich regions enriched in AGO2 and UPF1 binding sites.

Generative 3D Reconstruction of Martian Surfaces using Monocular Images

Abstract. High-resolution digital terrain models (DEM) are crucial for Mars scientific exploration and engineering demands, such as mission route planning, landing site selection, and topography research. However, DEMs generated based on photogrammetry or photometry suffer from limited stereo coverage and complex generative processes. Therefore, we propose a GAN-based monocular 3D reconstruction method, which utilizes high-resolution monocular orbital images to achieve pixel-level Martian terrain reconstruction. We preprocess the image data and then invert the elevation using the trained generative model. Finally, we recover the absolute scale through post-processing. In this work, we use HiRISE orthorectified images and DEMs with a resolution of 2 m and 0.25 m to validate the effectiveness of our method. We evaluated our method in four areas with different landforms and found that the predicted DEM and HiRISE DEM have height consistency with the root mean square error of about 2 m. This indicates that the proposed GAN-based method has certain effectiveness and generalization and great potential in high-resolution monocular Martian DEM reconstruction.

Late olfactory bulb involvement in COVID19.

Transient or persistent hypo-anosmia is common in SARS‑CoV‑2 infection but olfactory pathway late-term morphometric changes are still under investigation. We evaluated late olfactory bulb (OB) imaging changes and their correlates with the olfactory function in otherwise neurologically asymptomatic COVID-19 patients. Eighty-three subjects (mean-age 43±14 years; 54 females; time-interval infection/MRI: 129±68 days) affected by asymptomatic to mild COVID19 in 2020 and 25 healthy controls (mean-age 40±13 years; 9 females) underwent 3T-MRI and olfactory function evaluation through anamnestic questionnaire and Sniffin' Sticks. Exclusion criteria were intensive care treatment or neurological involvement other than olfaction. Maximal OB area was measured blindly on high-resolution coronal T2w images by two observers. Patients were subdivided into: i) persistently hypo/anosmic, ii) recovered normosmic and iii) never complaining smell dysfunction with proven normal olfactory function. No significant differences were observed among patients' subgroups (p=0.76). Intra-observer and inter-observer reliability were high.(r=0.96 and 0.86). Former COVID19 patients had decreased mean maximal OB area than controls (6.52±1.11mm2 vs 7.26±1.17mm2, p=0.008) even when considering persistently hypo-anosmic (6.46±0.90, p=0.006) or normosmic patients at MRI (6.57±1.25, p=0.04). SARS-CoV-2 infection is associated with mid/late-term morphological changes on the olfactory bulbs, regardless of presence or persistence of olfactory dysfunction. The long-term consequences on olfactory aging need to be further investigated including possible links with neurodegenerative disorders.

FEHAT: Efficient, Large scale and Automated Heartbeat Detection in Medaka Fish Embryos

Abstract High resolution imaging of model organisms allows the quantification of important physiological measurements. In the case of fish with transparent embryos, these videos can visualise key physiological processes, such as heartbeat. High throughput systems can provide enough measurements for the robust investigation of developmental processes as well as the impact of system perturbations on physiological state. However, few analytical schemes have been designed to handle thousands of high-resolution videos without the need for some level of human intervention. We developed a software package, named FEHAT, to provide a fully automated solution for the analytics of large numbers of heart rate imaging datasets obtained from developing Medaka fish embryos in 96 well plate format imaged on an Acquifer machine. FEHAT uses image segmentation to define regions of the embryo showing changes in pixel intensity over time, followed by the classification of the most likely position of the heart and Fourier Transformations to estimate the heart rate. Here we describe some important features of the FEHAT software, showcasing its performance across a large set of medaka fish embryos and compare its performance to established, less automated solutions. FEHAT provides reliable heart rate estimates across a range of temperature-based perturbations and can be applied to tens of thousands of embryos without the need for any human intervention. Availability Data used in this manuscript will be made available on request. Supplementary information Supplementary data are available at Bioinformatics online.

The MeerKAT view on Galactic supernova remnants

The integrated radio spectrum of supernova remnants (SNRs) and the spatial variation of the spectral indices across these extended sources are powerful tools for studying the shocks and particle acceleration processes occurring in different SNR regions. Characterization of these processes requires sensitive flux density measurements and high-resolution images, which are not always available due to observing difficulties. We want to show the potentiality of the high-resolution SARAO MeerKAT legacy Galactic Plane Survey (SMGPS) images regarding the morphological and spectral characterization of 29 known galactic SNRs. We used the SMGPS data at $1.284$ GHz coupled with data from the GaLactic and Extragalactic All-sky Murchison Widefield Array (GLEAM) survey ($0.072-0.231$ GHz) to characterize the integrated spectrum of each source and search for spatial spectral variation through analysis of sensitive spectral index maps. We were able to redefine the exact morphology of four SNRs (G024.7-00.6, G051.4+00.7, G348.7+0.3, and G351.9+00.1), distinguishing them from unrelated sources or identifying new emission regions associated with them and never observed before. In many other cases, we identified in the SMGPS images several overlaid with the remnants, and we were able to estimate their spectral contribution through inspection of the spatial variation of the spectral indices across the remnants. The integrated spectral indices show a more uniform distribution with respect to what is obtained by considering the values reported in the literature. We show that new sensitive and high-resolution data are crucial to firmly constraining both the integrated and spatially resolved spectrum of SNRs, especially for the less studied objects of the southern hemisphere. The comparison of our SMGPS-GLEAM spectral index maps with IR, molecular, and gamma -ray images allowed us to investigate the nature of the peculiar remnant regions.

Mesoscopic axially swept oblique plane microscope for the imaging of freely moving organisms with near-isotropic resolution

Rapid three-dimensional imaging over extended fields of view (FOVs) is crucial to the study of organism-wide systems and biological processes in vivo. Selective-plane illumination microscopy (SPIM) is a powerful method for high spatio-temporal resolution in toto imaging of such biological specimens. However, typical SPIM implementations preclude conventional sample mounting and have anisotropic imaging performance, in particular when designed for large FOVs over 1 mm diameter. Here, we introduce axial sweeping of the illumination into a non-orthogonal dual-objective oblique plane microscope (OPM) design, thereby enabling the observation of freely moving animals over millimeter-sized FOVs, at close to isotropic, sub-cellular resolution. We apply our mesoscopic axially swept OPM (MASOPM) to image the behavioral dynamics of the sea anemone Nematostella vectensis over 1 × 0.7 × 0.4 mm at 1.7 × 2.6 × 3.7 µm resolution and 0.5 Hz volume rate.

Fast and universal single-molecule localization using multi-dimensional point spread functions

The recent development of single-molecule imaging techniques has enabled not only high accuracy spatial resolution imaging but also information rich functional imaging. Abundant information about single molecules can be encoded in its diffraction pattern and be extracted precisely (e.g. 3D position, wavelength, dipole orientation). However, sophisticated high dimensional point spread function (PSF) modeling and analyzing methods have greatly impeded the broad accessibility of these techniques. Here, we present a graphics processing unit (GPU) -based B-spline PSF modeling method that could flexibly model high dimensional PSFs with arbitrary shape without greatly increasing the model parameters. Our B-spline fitter achieves 100 times speed improvement and minimal uncertainty for each dimension, enabling efficient high dimensional single-molecule analysis. We demonstrated, both in simulations and experiments, the universality and flexibility of our B-spline fitter to accurately extract the abundant information from different types of high dimensional single-molecule data, including multicolor PSF (3D + color), multi-channel four-dimensional 4Pi-PSF (3D + interference phase) and five-dimensional vortex PSF (3D + dipole orientation).

Constructing a 22-year internal wave dataset for the northern South China Sea: spatiotemporal analysis using MODIS imagery and deep learning

Abstract. Internal waves (IWs) are an important ocean phenomenon facilitating energy transfer between multiscale ocean processes. Understanding such processes necessitates the collection and analysis of extensive observational data. IWs predominantly occur in marginal seas, with the South China Sea (SCS) being one of the most active regions, characterized by frequent and large-amplitude IW activities. In this study, we present a comprehensive IW dataset for the northern SCS (https://doi.org/10.12157/IOCAS.20240409.001, Zhang and Li, 2024), covering the area from 112.40 to 121.32° E and from 18.32 to 23.19° N, spanning the period from 2000 to 2022 with a 250 m spatial resolution. During the 22 years, a total of 15 830 MODIS images were downloaded for further processing. Out of these, 3085 high-resolution MODIS true-color images were identified to contain IW information and were included in the dataset with precise IW positions extracted using advanced deep learning techniques. IWs in the northern SCS are categorized into four regions based on extracted IW spatial distributions. This classification enables detailed analyses of IW characteristics, including their spatial and temporal distributions across the entire northern SCS and its specific sub-regions. Interestingly, our temporal analysis reveals characteristic “double-peak” patterns aligned with the lunar day, highlighting the strong connection between IWs and tidal cycles. Furthermore, our spatial analysis identifies two IW quiescent zones within the IW clusters influenced by underwater topography, highlighting regional variations in IW characteristics and suggesting underlying mechanisms which merit further investigation. There are also three gap regions between distinct IW clusters, which may indicate different IW sources. The constructed dataset holds significant potential for studying IW–environment interactions, developing monitoring and prediction models, validating numerical simulations, and serving as an educational resource to promote awareness and interest in IW research.

Unveiling connections between venous disruption and cerebral small vessel disease using diffusion tensor image analysis along perivascular space (DTI-ALPS): A 7-T MRI study.

Cerebral venous disruption is one of the characteristic findings in cerebral small vessel disease (CSVD), and its disruption may impede perivascular glymphatic drainage. And lower diffusivity along perivascular space (DTI-ALPS) index has been suggested to be with the presence and severity of CSVD. However, the relationships between venous disruption, DTI-ALPS index, and CSVD neuroimaging features remain unclear. To investigate the association between venous integrity and perivascular diffusion activity, and explore the mediating role of DTI-ALPS index between venous disruption and CSVD imaging features. In this cross-sectional study, 31 patients (mean age, 59.0 ± 9.9 years) were prospectively enrolled and underwent 7-T magnetic resonance (MR) imaging. DTI-ALPS index was measured to quantify the perivascular diffusivity. The visibility and continuity of deep medullary veins (DMVs) were evaluated based on a brain region-based visual score on high-resolution susceptibility-weighted imaging. White matter hyperintensity (WMH) and perivascular space (PVS) were assessed using qualitative and quantitative methods. Linear regression and mediation analysis were performed to analyze the relationships among DMV scores, DTI-ALPS index, and CSVD features. The DTI-ALPS index was significantly associated with the parietal DMV score (β = -0.573, p corrected = 0.004). Parietal DMV score was associated with WMH volume (β = 0.463, p corrected = 0.013) and PVS volume in basal ganglia (β = 0.415, p corrected = 0.028). Mediation analyses showed that DTI-ALPS index manifested a full mediating effect on the association between parietal DMV score and WMH (indirect effect = 0.115, Pm = 43.1%), as well as between parietal DMV score and PVS volume in basal ganglia (indirect effect = 0.161, Pm = 42.8%). Cerebral venous disruption is associated with glymphatic activity, and with WMH and PVS volumes. Our results suggest cerebral venous integrity may play a critical role in preserving perivascular glymphatic activity; while disruption of small veins may impair the perivascular diffusivity, thereby contributing to the development of WMH and PVS enlargement.

Multidisciplinary high resolution Geophysical Imaging of Pantano Ripa Rossa Segment of the Irpinia Fault (Southern Italy).

The Irpinia Fault, also known as the Monte Marzano Fault System, located in the Southern Apennines (Italy), is one of the most seismically active structures in the Mediterranean. It is the source of the 1980, Ms 6.9, multi-segment rupture earthquake that caused significant damage and nearly 3,000 casualties. Paleoseismological surveys indicate that this structure has generated at least four Mw ~ 7 surface-rupturing earthquakes in the past 2ka. This paper presents a comprehensive, high-resolution geophysical investigation focused on the southernmost fault segment of the Monte Marzano Fault System, i.e., the Pantano-Ripa Rossa Fault, outcropping within the Pantano di San Gregorio Magno intramontane basin. The project, named TEst Site IRpinia fAult (TESIRA), was supported by the University of Napoli Federico II to study the near-surface structure of this intra-basin fault splay that repeatedly ruptured co-seismically in the past thousands of years. Our imaging approach included 2D and 3D electrical and seismic surveys, gravimetry, 3D FullWaver electrical tomography, drone-borne GPR and magnetic surveys, and CO2 soil flux assessment across the surface rupture. This multidisciplinary investigation improved our understanding of the basin shallow structure, providing an image of a rather complex subsurface fault and basin geometry. Seismic data suggest that fault activity at the Pantano segment of MMFS is characterized by a near-surface cumulative displacement greater than previous estimations, calling into question earlier assumptions about the timing of its activation. Despite some challenges with our drone-mounted survey equipment, the integrated dataset provides a comprehensive and reliable image of the subsurface structure. This work demonstrates the utility of developing an integrated approach at high-resolution geophysical imaging and interpretation of fault zones with weak morphological expressions.

Chemical Distribution Uniformity Assessment of "Intra-Tablet" by Hyperspectral Raman Imaging Analysis.

This study aimed to develop a new index, Distribution Uniformity Index (DUI), to assess the "intra-tablet" homogeneity. High-resolution hyperspectral Raman imaging was adopted to scan a tablet to get the components' distribution. The heuristic algorithm was applied to generate a Raman heatmap with RGB colors quantitatively correlated with the concentrations of each component. DUI is defined as the ratio of the area under the uniformity curve of the sample image to that of the randomized image. The accuracy and applicability of DUI were verified by constructing model images with controlled uniformity and random regions. The effects of "intra-tablet" homogeneity on the disintegration and dissolution of spironolactone tablets were investigated. DUI value was directly obtained from heuristic visual analysis of macro-pixel from hyperspectral Raman images. A good linear relationship and good repeatability were confirmed between DUI and the uniformity of model images. The size of CaSO4·2H2O affected the "intra-tablet" homogeneity of spironolactone tablets, which was detected by the DUI value. The better "intra-tablet" homogeneity led to a higher disintegration and dissolution of spironolactone tablets. DUI represents a novel index to evaluate the "intra-tablet" homogeneity and is beneficial for formulation research and development.

Event-based high-resolution neutron image formation analysis using intensified CMOS cameras.

We present a versatile optical setup for high-resolution neutron imaging with an adaptable field of view and magnification that can resolve individual neutron absorption events with an image intensifier and a CMOS camera. Its imaging performance is characterized by evaluating the resolution limits of the individual optical components and resulting design aspects are discussed. Neutron radiography measurements of a Siemens star pattern were performed in event mode acquisition comparing two common high-resolution neutron scintillators, crystalline Gadolinium Gallium Garnet (GGG) and powdered Gadolinium Oxysulfide (GOS). An analysis of the light signature caused by neutron absorption events is performed and some resulting issues for both GGG and GOS regarding optical system design are addressed. Both scintillators reach similar resolution (4-5 m) in event mode acquisition despite different light emission characteristics. The findings suggest that, in the case of GOS, the resolution is limited by the size of the light clusters which in turn originate from the photon scattering at the boundaries of the powder particles comprising it, while with GGG the lower light conversion efficiency makes it challenging to collect enough photons to trigger sufficient signal amplification in the image intensifier. Overall, the proposed event-based evaluation of scintillators allows for quantifying and optimizing various design parameters, which is much more complex than adopting conventional methods based on integrated images.

MAPPING WOOD DENSITY VARIATION USING QGIS: AN INNOVATIVE APPROACH FOR CHARACTERIZATION OF OCHROMA PYRAMIDALE, ACACIA MANGIUM, EUCALYPTUS GRANDIS, AND PINUS SP.

This study explores the innovative application of QGIS for mapping radial wood density variation across the entire cross-section of selected native and non-native forest species, aiming to enhance wood characterization. Using samples from Ochroma pyramidale, Acacia mangium, Eucalyptus grandis, and Pinus sp., we applied X-ray densitometry to obtain high-resolution images, which were then analyzed with QGIS to create detailed density maps. These maps provided a clear visualization of radial density variation, offering insights into the internal structure of the wood. The integration of QGIS with X-ray densitometry proved to be an effective tool for assessing wood density variation, supporting more precise and sustainable forest management practices.

Estimation of horizontal spatial specifications for ideal head-mounted displays in practical conditions

This study presents the horizontal spatial specifications required for developing ideal head-mounted displays (HMDs) that provide visual experiences indistinguishable from those obtained without wearing HMDs. We investigated the minimum specifications for pixel density and field of view (FoV) such that users cannot perceive any degradation in these aspects. Conventional studies have measured visual acuity in the periphery and FoV size without eye movement. However, these results are not sufficient to determine the spatial specifications because users may notice a degradation in the quality of images displayed in the periphery when shifting their gaze away from the front. In this study, we measured visual characteristics under practical conditions, wherein participants moved their eyes naturally in coordination with their head movements, as observed when viewing natural scenes. Using a cylindrical display that covered the participant’s entire horizontal visual field with high resolution images, we asked participants to identify degraded spatial resolution or narrowed FoV. Results showed that ideal HMDs do not have to provide spatial frequency components above 0.5 and 2 cycles per degree outside the visual fields of approximately 210° and 120° horizontally, respectively. These results suggest that a resolution equivalent to one-fifteenth of the frontal area is sufficient for the lateral areas of the head. In addition, we found that ideal HMDs require a FoV of at least 240°. This is considerably smaller than a naive estimate of 310° based on previous studies, obtained by integrating the FoV size during fixation and the movable range of the eyes. We believe that these findings will be helpful in developing ideal HMDs.

Ca2+ tunneling architecture and function are important for secretion.

Ca2+ tunneling requires both store-operated Ca2+ entry (SOCE) and Ca2+ release from the endoplasmic reticulum (ER). Tunneling expands the SOCE microdomain through Ca2+ uptake by SERCA into the ER lumen where it diffuses and is released via IP3 receptors. In this study, using high-resolution imaging, we outline the spatial remodeling of the tunneling machinery (IP3R1; SERCA; PMCA; and Ano1 as an effector) relative to STIM1 in response to store depletion. We show that these modulators redistribute to distinct subdomains laterally at the plasma membrane (PM) and axially within the cortical ER. To functionally define the role of Ca2+ tunneling, we engineered a Ca2+ tunneling attenuator (CaTAr) that blocks tunneling without affecting Ca2+ release or SOCE. CaTAr inhibits Cl- secretion in sweat gland cells and reduces sweating in vivo in mice, showing that Ca2+ tunneling is important physiologically. Collectively our findings argue that Ca2+ tunneling is a fundamental Ca2+ signaling modality.

Feasibility of Backscattering Coefficient Evaluation of Soft Tissue Using High-Frequency Annular Array Probe

The objective of this work is to address the need for versatile and effective tissue characterization in abdominal ultrasound diagnosis using a simpler system. We evaluated the backscattering coefficient (BSC) of several tissue-mimicking phantoms utilizing three different ultrasonic probes: a single-element transducer, a linear array probe for clinical use, and a laboratory-made annular array probe. The single-element transducer, commonly used in developing fundamental BSC evaluation methods, served as a benchmark. The linear array probe provided a clinical comparison, while the annular array probe was tested for its potential in high-frequency and high-resolution ultrasonic observations. Our findings demonstrate that the annular array probe meets clinical demands by providing accurate BSC measurements, showcasing its capability for high-frequency and high-resolution imaging with a simpler, more versatile system.

A Cross-talk between Nanomedicines and Cardiac Complications: Comprehensive View.

Cardiovascular Diseases (CVDs) are the leading cause of global morbidity and mortality, necessitating innovative approaches for both therapeutics and diagnostics. Nanoscience has emerged as a promising frontier in addressing the complexities of CVDs. This study aims to explorethe interaction of CVDs and Nanomedicine (NMs), focusing on applications in therapeutics and diagnostics. In the realm of therapeutics, nanosized drug delivery systems exhibit unique advantages, such as enhanced drug bioavailability, targeted delivery, and controlled release. NMs platform, including liposomes, nanoparticles, and carriers, allows the precise drug targeting to the affected cardiovascular tissues with minimum adverse effects and maximum therapeutic efficacy. Moreover, nanomaterial (NM) enables the integration of multifunctional components, such as therapeutic agents and target ligands, into a single system for comprehensive CVD management. Diagnostic fronts of NMs offer innovative solutions for early detection and monitoring of CVDs. Nanoparticles and nanosensors enable highly sensitive and specific detection of Cardiac biomarkers, providing valuable insights into a disease state, its progression, therapeutic outputs, etc. Further, nano-based technology via imaging modalities offers high high-resolution imaging, aiding in the vascularization of cardiovascular structures and abnormalities. Nanotechnology-based imaging modalities offer high-resolution imaging and aid in the visualization of cardiovascular structures and abnormalities. The cross-talk of CVDs and NMs holds tremendous potential for revolutionizing cardiovascular healthcare by providing targeted and efficient therapeutic interventions, as well as sensitive and early detection for the improvement of patient health if integrated with Artificial Intelligence (AI).

British Skull Base Society Consensus on Vestibular Schwannoma Surveillance

Abstract Objective Surveillance plays a crucial role in managing patients with vestibular schwannomas (VSs). Consensus is lacking on the optimal duration, frequency, and modality of imaging. Standardizing this approach would ensure safe and effective care, reduce patient distress, and promote consistency in management decisions among clinicians. Methods In July 2022, a multi-disciplinary Delphi consensus was conducted at the British Skull Base Society Meeting. Expert United Kingdom-based skull-base surgeons and neuroradiologists were presented semi-systematic literature reviews summarizing current evidence on VS management. Anonymized opinions were collated and discussed to reach a majority vote, which was deemed the final consensus opinion. Results Recommendations for VS managed by surveillance are: (1) surveillance frequency should decrease over time; (2) surveillance may be discontinued when the remaining lifetime risk of VS growth is <0.5% (∼8.5 years); (3) factors such as age, VS size, VS location, and cystic components should be considered. Surveillance after surgery or radiotherapy has limited evidence but recommendations are: (4) surveillance should be adjusted based on residual tumor size or nodular enhancement. Imaging modality and sequences are recommended to be (5) high-resolution magnetic resonance imaging with T1, T2, FIESTA/CISS multiplanar sequences, contrast is not required in untreated cases, and linear reporting of measurements is pragmatically sufficient. Conclusion This consensus and literature review provides an evidence and expert opinion–based guide to help clinicians with the surveillance of patients with VS. Further research should focus on better understanding the dynamic nature of growth risks and the growth characteristics of postintervention VS to enable personalized growth risk stratification.

Computer vision applications for the detection or analysis of tuberculosis using digitised human lung tissue images - a systematic review

ObjectiveTo conduct a systematic review of the computer vision applications that detect, diagnose, or analyse tuberculosis (TB) pathology or bacilli using digitised human lung tissue images either through automatic or semi-automatic methods. We categorised the computer vision platform into four technologies: image processing, object/pattern recognition, computer graphics, and deep learning. In this paper, the focus is on image processing and deep learning (DL) applications for either 2D or 3D digitised human lung tissue images. This review is useful for establishing a common practice in TB analysis using human lung tissue as well as identifying opportunities for further research in this space. The review brings attention to the state-of-art techniques for detecting TB, with emphasis on the challenges and limitations of the current techniques. The ultimate goal is to promote the development of more efficient and accurate algorithms for the detection or analysis of TB, and raise awareness about the importance of early detection.DesignWe searched five databases and Google Scholar for articles published between January 2017 and December 2022 that focus on Mycobacterium tuberculosis detection, or tuberculosis pathology using digitised human lung tissue images. Details regarding design, image processing and computer-aided techniques, deep learning models, and datasets were collected and summarised. Discussions, analysis, and comparisons of state-of-the-art methods are provided to help guide future research. Further, a brief update on the relevant techniques and their performance is provided.ResultsSeveral studies have been conducted to develop automated and AI-assisted methods for diagnosing Mtb and TB pathology from digitised human lung tissue images. Some studies presented a completely automated method of diagnosis, while other studies developed AI-assisted diagnostic methods. Low-level focus areas included the development of a novel μ\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$\\upmu$$\\end{document}CT scanner for soft tissue image contract, and use of multiresolution computed tomography to analyse the 3D structure of the human lung. High-level focus areas included the investigation the effects of aging on the number and size of small airways in the lungs using CT and whole lung high-resolution μ\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$\\upmu$$\\end{document}CT, and the 3D microanatomy characterisation of human tuberculosis lung using μ\\documentclass[12pt]{minimal} \\usepackage{amsmath} \\usepackage{wasysym} \\usepackage{amsfonts} \\usepackage{amssymb} \\usepackage{amsbsy} \\usepackage{mathrsfs} \\usepackage{upgreek} \\setlength{\\oddsidemargin}{-69pt} \\begin{document}$$\\upmu$$\\end{document}CT in conjunction with histology and immunohistochemistry. Additionally, a novel method for acquiring high-resolution 3D images of human lung structure and topology is also presented.ConclusionThe literature indicates that post 1950s, TB was predominantly studied using animal models even though no animal model reflects the full spectrum of human pulmonary TB disease and does not reproducibly transmit Mtb infection to other animals (Hunter, 2011). This explains why there are very few studies that used human lung tissue for detection or analysis of Mtb. Nonetheless, we found 10 studies that used human tissues (predominately lung) of which five studies proposed machine learning (ML) models for the detection of bacilli and the other five used CT on human lung tissue scanned ex-vivo.

Airborne Multi-Channel Forward-Looking Radar Super-Resolution Imaging Using Improved Fast Iterative Interpolated Beamforming Algorithm

Radar forward-looking imaging is critical in many civil and military fields, such as aircraft landing, autonomous driving, and geological exploration. Although the super-resolution forward-looking imaging algorithm based on spectral estimation has the potential to discriminate multiple targets within the same beam, the estimation of the angle and magnitude of the targets are not accurate due to the influence of sidelobe leakage. This paper proposes a multi-channel super-resolution forward-looking imaging algorithm based on the improved Fast Iterative Interpolated Beamforming (FIIB) algorithm to solve the problem. First, the number of targets and the coarse estimates of angle and magnitude are obtained from the iterative adaptive approach (IAA). Then, the accurate estimates of angle and magnitude are achieved by the strategy of iterative interpolation and leakage subtraction in FIIB. Finally, a high-resolution forward-looking image is obtained through non-coherent accumulation. The simulation results of point targets and scenes show that the proposed algorithm can distinguish multiple targets in the same beam, effectively improve the azimuthal resolution of forward-looking imaging, and attain the accurate reconstruction of point targets and the contour reconstruction of extended targets.