High-resolution Dataset Research Articles

Revisiting the relationships between energy consumption, economic development and urban size: A global perspective using remote sensing data

Existing methods of measuring energy consumption require complex statistics and computing. A real-time and globally applicable approach for comparing energy consumption across different cities is still lacking. Additionally, the nonlinear relationships and varying thresholds of energy consumption in relation to economic activities and urbanization remain unconfirmed. This study aims to fill these gaps by utilizing Suomi National Polar-orbiting Partnership Visible Infrared Imaging Radiometer Suite (NPP-VIIRS) nighttime light data in 2015 and a top-down approach based on a multiple regression model to examine energy consumption in global cities employing a redefined urban boundary. It also explores the accurate relationship between energy consumption, population density (as a proxy of urbanization), and per capita gross domestic product (GDP) across different regions and urban sizes using generalized additive models and regression models. High-resolution gridded population and GDP datasets covering the entire planet are utilized for this purpose. The study also estimates the development potentiality. The study yields followings outcomes: Firstly, the top 30 cities with the highest per capita energy consumption account for over 0.66% of the total per capita energy consumption of all cities. Secondly, in East Asia (EA) and Southeast Asia (SEA), the per capita energy consumption decreases when per capita GDP reaches $40,000 and $75,000, respectively, while it remains stable in cities located in Western Europe (WE) and North America (NA) as per capita GDP increases. Thirdly, the per capita energy consumption declines with increasing urban population density until reaching 10,000 person/km2, 22,000 person/km2, and 4000 person/km2 in EA, SEA, and NA, respectively. Fourthly, in Central Asia (CA), megacities can save over 100 Mbtu/population when per capita GDP increases by $1000 compared to big cities. This pioneering study provides a comparable investigation of energy consumption at the global city level, exploring its relationship with urbanization and economy by employing a unified calculation standard. It will facilitate long-term energy-saving policies and urban planning strategies.

A global dataset of the shape of drainage systems

Abstract. Drainage basins delineate Earth's land surface into individual water collection units. Basin shape and river sinuosity determine water and sediment dynamics, affecting landscape evolution and connectivity between ecosystems and freshwater species. However, a high-resolution global dataset for the boundaries and geometry of basins is still missing. Using a 90 m resolution digital elevation model, we measured the areas, lengths, widths, aspect ratios, slopes, and elevations of basins over 50 km2 globally. Additionally, we calculated the lengths and sinuosities of the longest river channels within these 0.67 million basins. We built a new global dataset, Basin90m, to present the basins and rivers, as well as their morphological metrics. To highlight the use cases of Basin90m, we explored the correlations among morphological metrics, such as Hack's law. By comparing with HydroSHEDS, HydroATLAS, and Google Earth images, we demonstrated the high accuracy of Basin90m. Basin90m, available in shapefile format, can be used on various GIS platforms, including QGIS, ArcGIS, and GeoPandas. Basin90m has substantial application prospects in geomorphology, hydrology, and ecology. Basin90m is available at https://doi.org/10.5880/GFZ.4.6.2023.004 (He et al., 2023).

Climate threats to coastal infrastructure and sustainable development outcomes

Climate hazards pose increasing threats to development outcomes across the world’s coastal regions by impacting infrastructure service delivery. Using a high-resolution dataset of 8.2 million households in Bangladesh’s coastal zone, we assess the extent to which infrastructure service disruptions induced by flood, cyclone and erosion hazards can thwart progress towards the Sustainable Development Goals (SDGs). Results show that climate hazards potentially threaten infrastructure service access to all households, with the poorest being disproportionately threatened in 69% of coastal subdistricts. Targeting adaptation to these climatic threats in one-third (33%) of the most vulnerable areas could help to safeguard 50–85% of achieved progress towards SDG 3, 4, 7, 8 and 13 indicators. These findings illustrate the potential of geospatial climate risk analyses, which incorporate direct household exposure and essential service access. Such high-resolution analyses are becoming feasible even in data-scarce parts of the world, helping decision-makers target and prioritize pro-poor development.

A Practical Deep Learning Architecture for Large-Area Solid Wastes Monitoring Based on UAV Imagery

The development of global urbanization has brought about a significant amount of solid waste. These untreated wastes may be dumped in any corner, causing serious pollution to the environment. Thus, it is necessary to accurately obtain their distribution locations and detailed edge information. In this study, a practical deep learning network for recognizing solid waste piles over extensive areas using unmanned aerial vehicle (UAV) imagery has been proposed and verified. Firstly, a high-resolution dataset serving to solid waste detection was created based on UAV aerial data. Then, a dual-branch solid waste semantic segmentation model was constructed to address the characteristics of the integration of solid waste distribution with the environment and the irregular edge morphology. The Context feature branch is responsible for extracting high-level semantic features, while the Spatial feature branch is designed to capture fine-grained spatial details. After information fusion, the model obtained more comprehensive feature representation and segmentation ability. The effectiveness of the improvement was verified through ablation experiments and compared with 13 commonly used semantic segmentation models, demonstrating the advantages of the method in solid waste segmentation tasks, with an overall accuracy of over 94%, and a recall rate of 88.6%—much better than the best performing baselines. Finally, a spatial distribution map of solid waste over Jiaxing district, China was generated by the model inference, which assisted the environmental protection department in completing environmental management. The proposed method provides a feasible approach for the accurately monitoring of solid waste, so as to provide policy support for environmental protection.

Region-based convolutional neural networks for occluded person re-identification

In a variety of applications, including intelligent surveillance systems, targeted tracking, and assistive human-following robots, the ability to accurately identify individuals even when they are partially obscured is imperative. Such Continuous person tracking is complicated by the close similarity between the appearance of people and target occlusions. This study addresses this significant challenge by proposing a two-step, detection-first approach that uses a region-based convolutional neural network (R-CNN) as the re-identification (re-ID)solution. The model is specifically trained to detect occluded persons at different levels of occlusion before forwarding the image for the re-ID process. Three occluded-specific datasets are selected to evaluate the model's effectiveness in detecting occluded people. There are 379 distinct people in total, and each has five images obstructed from different angles. A sample of the data is taken to simulate various environment settings, and new data points are generated with different degrees of occlusion to assess how well the model performs under varying levels of obstruction. The findings demonstrate that the proposed person re-ID model is reliable in most circumstances, correctly re-identifying at 74% (Rank-1) and 90% (Rank-5). Although there is a decrease in accuracy as the number of distinctive people in the dataset increases, this does not significantly impact the tracking performance in various applications, which are expected to recognize a single person or a small group of individuals. Future works will explore refining similarity matching algorithms by delving into robust image comparison techniques, thereby addressing the challenges presented by occlusions. A critical aspect is to assess the model under diverse lighting conditions and investigate scenarios with multiple individuals in a frame. It is also beneficial to exploit high-resolution datasets, such as DukeMTMC-reID, and integrate finer contextual details, like clothing or carried objects. These collective efforts are essential for optimizing the model’s efficacy in practical applications and advancing person re-ID technologies.

Unsupervised machine learning and depth clusters of Euler deconvolution of magnetic data: a new approach to imaging geological structures

We present a novel approach that determines the location and dip of geologic structures by clustering Euler deconvolution depth solutions using Density-Based Spatial Clustering Applications with Noise (DBSCAN). This method and workflow rely on the association of changes in the location and relationships between Euler depth clusters and cluster boundaries with changes in rock susceptibility. We applied our method to global magnetic and high-resolution aeromagnetic datasets over Phanerozoic-Precambrian zone-bounding faults in west and central Victoria. The architecture of these structures at different scales from this imaging technique is comparable to interpreted 2D seismic reflection data. The results from the global magnetic data resolved the architecture of these structures below 5 km, while the aeromagnetic data used were limited to structural information of faults above 2 km depth. Therefore, this method shows the structural relationship of the west-dipping Avoca Fault that soles into the east-dipping Moyston Fault at a depth of ∼22 km in central Victoria and at a shallower depth of ∼15 km southward beneath the Quaternary basaltic rocks of the Newer Volcanic Province. In the vicinity of the Heathcote Zone, the method resolves the location, dip, and overprinting relationship between faults and extrusive rocks, such as the relationship between the Heathcote and Mount William Faults and the granitic Cobaw Batholith. We show how combining magnetic data at various scales can track faults from the near-surface to deeper roots while avoiding possible over-interpretation. We demonstrate how to optimise the DBSCAN parameters and a sensitivity analysis of how to determine clusters and cluster boundaries that are geologically relevant in the absence of geological constraints. Our technique provides an effective and rapid tool for imaging structures and can supplement complex and expensive imaging techniques to resolve the architecture of structures in complex geologic terrains.

3D reconstruction of horizontal and vertical quasi-geostrophic currents in the North Atlantic Ocean

Abstract. In this paper we introduce a new high-resolution (1/10°) data-driven dataset of 3D ocean currents developed by the National Research Council of Italy in the framework of the European Space Agency World Ocean Circulation project: the WOC-NATL3D dataset. The product domain extends over a wide portion of the North Atlantic Ocean from the surface down to 1500 m depth, and the dataset covers the period between 2010 and 2019. To generate this product, a diabatic quasi-geostrophic diagnostic model is applied to data-driven 3D temperature and salinity fields obtained through a deep learning technique, along with ERA5 fluxes and empirical estimates of the horizontal Ekman currents based on input provided by the European Copernicus Marine Service. The assessment of WOC-NATL3D currents is performed by direct validation of the total horizontal velocities with independent drifter estimates at various depths (0, 15 and 1000 m) and by comparing them with existing reanalyses that are obtained through the assimilation of observations into ocean general circulation numerical models. Our estimates of the ageostrophic components of the flow improve the total horizontal velocity reconstruction, being more accurate and closer to observations than model reanalyses in the upper layers, also providing an indirect proof of the reliability of the resulting vertical velocities. The reconstructed WOC-NATL3D currents are freely available at https://doi.org/10.12770/0aa7daac-43e6-42f3-9f95-ef7da46bc702 (Buongiorno Nardelli, 2022).

Dynamics of land cover changes and driving forces in China’s drylands since the 1970 s

The land cover in China’s drylands has undergone dramatic changes due to rapid economic development and ecological restoration; however, the long-term and detailed land cover and land use change (LCLUC) focus on this unique region remains inadequate. Based on a temporally continuous and spatially high-resolution ChinaCover dataset from 1975, as well as climatic and socioeconomic data, this study analyzed the spatiotemporal pattern of LCLUC in China’s drylands over 45 years, revealed the land conversions in the secondary category and explored its major driving factors in different periods. The results show that the rate of LCLUC is accelerating, and the trajectory of LCLUC is slowly changing although stable land is dominant. There are complex conversions among land covers, with each type of change affecting an average of 12 other types, and the LCLUC in drylands was mainly determined by the mutual conversions among shrub, desert shrub, steppe, sparse grassland, built-up, upland, and barren land. Anthropogenic land has grown rapidly, especially in the ethnic autonomous regions of Xinjiang, Ningxia, and Inner Mongolia, while ecological restoration programs have led to significant growth of natural land in the remaining regions. The widespread rapid expansion of artificial surfaces, western growth of agricultural land and eastern recovery of woodland have been supported by the continued decline of grassland and unused land. LCLUC in China’s drylands was more influenced by population in the 1980 s, while economic development had a stronger influence in the 1990 s. In the 2000 s and 2010 s, however, population and cultivation had a stronger influence. All drivers are backed by macro policies. It was observed that resolution has a significant impact on the LCLUC when the resolution increases from 30 m to 10 m. These findings provide decision support for sustainable policy making and further promote the exploration of complex human-land relationships in drylands.

An Optimized Smoke Segmentation Method for Forest and Grassland Fire Based on the UNet Framework

Smoke, a byproduct of forest and grassland combustion, holds the key to precise and rapid identification—an essential breakthrough in early wildfire detection, critical for forest and grassland fire monitoring and early warning. To address the scarcity of middle–high-resolution satellite datasets for forest and grassland fire smoke, and the associated challenges in identifying smoke, the CAF_SmokeSEG dataset was constructed for smoke segmentation. The dataset was created based on GF-6 WFV smoke images of forest and grassland fire globally from 2019 to 2022. Then, an optimized segmentation algorithm, GFUNet, was proposed based on the UNet framework. Through comprehensive analysis, including method comparison, module ablation, band combination, and data transferability experiments, this study revealed that GF-6 WFV data effectively represent information related to forest and grassland fire smoke. The CAF_SmokeSEG dataset was found to be valuable for pixel-level smoke segmentation tasks. GFUNet exhibited robust smoke feature learning capability and segmentation stability. It demonstrated clear smoke area delineation, significantly outperforming UNet and other optimized methods, with an F1-Score and Jaccard coefficient of 85.50% and 75.76%, respectively. Additionally, augmenting the common spectral bands with additional bands improved the smoke segmentation accuracy, particularly shorter-wavelength bands like the coastal blue band, outperforming longer-wavelength bands such as the red-edge band. GFUNet was trained on the combination of red, green, blue, and NIR bands from common multispectral sensors. The method showed promising transferability and enabled the segmentation of smoke areas in GF-1 WFV and HJ-2A/B CCD images with comparable spatial resolution and similar bands. The integration of high spatiotemporal multispectral data like GF-6 WFV with the advanced information extraction capabilities of deep learning algorithms effectively meets the practical needs for pixel-level identification of smoke areas in forest and grassland fire scenarios. It shows promise in improving and optimizing existing forest and grassland fire monitoring systems, providing valuable decision-making support for fire monitoring and early warning systems.

Automated neonatal nnU-Net brain MRI extractor trained on a large multi-institutional dataset

Brain extraction, or skull-stripping, is an essential data preprocessing step for machine learning approaches to brain MRI analysis. Currently, there are limited extraction algorithms for the neonatal brain. We aim to adapt an established deep learning algorithm for the automatic segmentation of neonatal brains from MRI, trained on a large multi-institutional dataset for improved generalizability across image acquisition parameters. Our model, ANUBEX (automated neonatal nnU-Net brain MRI extractor), was designed using nnU-Net and was trained on a subset of participants (N = 433) enrolled in the High-dose Erythropoietin for Asphyxia and Encephalopathy (HEAL) study. We compared the performance of our model to five publicly available models (BET, BSE, CABINET, iBEATv2, ROBEX) across conventional and machine learning methods, tested on two public datasets (NIH and dHCP). We found that our model had a significantly higher Dice score on the aggregate of both data sets and comparable or significantly higher Dice scores on the NIH (low-resolution) and dHCP (high-resolution) datasets independently. ANUBEX performs similarly when trained on sequence-agnostic or motion-degraded MRI, but slightly worse on preterm brains. In conclusion, we created an automatic deep learning-based neonatal brain extraction algorithm that demonstrates accurate performance with both high- and low-resolution MRIs with fast computation time.

Tracking Progress Toward Urban Nature Targets Using Landcover and Vegetation Indices: A Global Study for the 96 C40 Cities.

Access to urban natural space, including blue and greenspace, is associated with improved health. In 2021, the C40 Cities Climate Leadership Group set 2030 Urban Nature Declaration (UND) targets: "Quality Total Cover" (30% green area within each city) and "Equitable Spatial Distribution" (70% of the population living close to natural space). We evaluate progress toward these targets in the 96 C40 cities using globally available, high-resolution data sets for landcover and normalized difference vegetation index (NDVI). We use the European Space Agency (ESA)'s WorldCover data set to define greenspace with discrete landcover categories and ESA's Sentinel-2A to calculate NDVI, adding the "open water" landcover category to characterize total natural space. We compare 2020 levels of urban green and natural space to the two UND targets and predict the city-specific NDVI level consistent with the UND targets using linear regressions. The 96-city mean NDVI was 0.538 (range: 0.148, 0.739). Most (80%) cities meet the Quality Total Cover target, and nearly half (47%) meet the Equitable Spatial Distribution target. Landcover-measured greenspace and total natural space were strong (mean R 2=0.826) and moderate (mean R 2=0.597) predictors of NDVI and our NDVI-based natural space proximity measure, respectively. The 96-city mean predicted NDVI value of meeting the UND targets was 0.478 (range: 0.352-0.565) for Quality Total Cover and 0.660 (range: 0.498-0.767) for Equitable Spatial Distribution. Our translation of the area- and access-based metrics common in urban natural space targets into the NDVI metric used in epidemiology allows for quantifying the health benefits of achieving such targets.

Scaling from global to regional river flow with global hydrological models: Choice matters

High-resolution global flow discharge datasets are critical to understand the terrestrial water cycle and river ecosystem services. Recently, a number of global hydrological models have been developed to capture global river flow dynamics at locally relevant scales. However, the relative accuracy of these simulated flow discharges is largely unknown. In this paper, using the largest observed streamflow datasets from > 26,000 gauging stations, we evaluated the performance of monthly and sub-monthly flow variation (1980–2014) generated from five major global hydrological models, Catchment-based Macro-scale Floodplain model (CaMa-Flood), Global Flood Awareness System (GloFAS-reanalysis), Global Reach-level Flood Reanalysis (GRFR), PCRaster GLOBal Water Balance model (PCR-GLOBWB), and Water Global Assessment and Prognosis (WaterGAP). Significant spatial heterogeneity in model performance was identified. We found that estimates by all five discharge datasets have a relatively high correlation with the observations (medians > 0.6). But none of them showed adequate correlations between simulated and observed flows for systems in Southwest or Central U.S.A., South Africa, or South Australia. Across all models, overestimation of monthly mean flow was more common than underestimation and high flows at a sub-monthly scale were more accurately characterized than low flows. Performance of all models was poor in Africa and Oceania. No single model performed universally best at all gauging stations, but GRFR showed the best estimate at around 40 % of the locations. None of the models provided satisfying estimates for rivers and streams in arid regions. We also found a significant negative effect of flow regulation on the predictive accuracy of all models. Our study highlights the importance of thorough evaluation of global discharge datasets before their local and regional application and provides guidance for future enhancement of global hydrological models.

PDFID: A high-resolution flood inundation dataset with a long time series

Study regionPoyang Lake and East Dongting Lake, China. Study focusOn the basis of data on the extent of the inundation of water bodies, the water level, and DEM data, this study constructed an hourly flood inundation dataset (PDFID) for the East Dongting Lake and Poyang Lake regions with a 10 m resolution and a coverage area of >5000 km2 from 2012 to 2022 by using the RFim model and the U-net model. Validation of the results on Sentinel-1 SAR images and Sentinel-2 MSI optical images showed that the overall accuracy of the dataset ranged from 88% to 97%, with a kappa coefficient ranging from 0.601 to 0.932. The accuracy for the East Dongting Lake region ranged from 88% to 97%, with a kappa coefficient of >0.67, and for the Poyang Lake region, the accuracy ranged from 89% to 97%, with a kappa coefficient of >0.6. New hydrological insights for the regionFlood inundation datasets with a high spatiotemporal resolution and long time series enable us to analyze and comprehend floods’ processes, patterns, and dynamics, facilitating the enhanced development and management of flood prevention and mitigation strategies. However, they have yet to be made available. Thus, this study can provide a fundamental data source for analytical mining and predicting the flooding processes in basins.

Drivers of Tree Canopy Loss in a Mid-Sized Growing City: Case Study in Portland, OR (USA)

The benefits of the urban tree and tree canopy (UTC) are increasingly crucial in addressing urban sustainability. Yet, increasingly evident from earlier research is the distributional inequities of UTC and active efforts to expand tree plantings. Less is known about the dynamics of UTC loss over time and location. This study aims to understand the dynamics of UTC change, especially canopy loss, and to investigate the drivers of the loss. This study draws on a high–resolution dataset of an urban canopy in Portland, Oregon, USA, assessing changes in UTC from 2014 to 2020. By integrating demographic, biophysical, and policy data with UTC information, we use a spatial autoregressive model to identify the drivers of UTC loss. The results reveal an unexpected spatial distribution of UTC change: less gain in the neighborhoods with the least UTC, and greater loss in the neighborhoods with moderate UTC. This study identifies four primary drivers of UTC loss: socioeconomic characteristics, urban form, activities on trees, and residential status. Factors such as population density, race, and income have an impact on canopy loss, as well as the building footprint and the number of multifamily housing units; residential statuses, such as the proportion of owner-occupied housing and residential stability, impact canopy loss.

Imputation of plasma lipid species to facilitate integration of lipidomic datasets

Recent advancements in plasma lipidomic profiling methodology have significantly increased specificity and accuracy of lipid measurements. This evolution, driven by improved chromatographic and mass spectrometric resolution of newer platforms, has made it challenging to align datasets created at different times, or on different platforms. Here we present a framework for harmonising such plasma lipidomic datasets with different levels of granularity in their lipid measurements. Our method utilises elastic-net prediction models, constructed from high-resolution lipidomics reference datasets, to predict unmeasured lipid species in lower-resolution studies. The approach involves (1) constructing composite lipid measures in the reference dataset that map to less resolved lipids in the target dataset, (2) addressing discrepancies between aligned lipid species, (3) generating prediction models, (4) assessing their transferability into the targe dataset, and (5) evaluating their prediction accuracy. To demonstrate our approach, we used the AusDiab population-based cohort (747 lipid species) as the reference to impute unmeasured lipid species into the LIPID study (342 lipid species). Furthermore, we compared measured and imputed lipids in terms of parameter estimation and predictive performance, and validated imputations in an independent study. Our method for harmonising plasma lipidomic datasets will facilitate model validation and data integration efforts.

A high-resolution calving front data product for marine-terminating glaciers in Svalbard

Abstract. The mass loss of glaciers outside the polar ice sheets has been accelerating during the past several decades and has been contributing to global sea-level rise. However, many of the mechanisms of this mass loss process are not well understood, especially the calving dynamics of marine-terminating glaciers, in part due to a lack of high-resolution calving front observations. Svalbard is an ideal site to study the climate sensitivity of glaciers as it is a region that has been undergoing amplified climate variability in both space and time compared to the global mean. Here we present a new high-resolution calving front dataset of 149 marine-terminating glaciers in Svalbard, comprising 124 919 glacier calving front positions during the period 1985–2023 (https://doi.org/10.5281/zenodo.10407266, Li et al., 2023). This dataset was generated using a novel automated deep-learning framework and multiple optical and SAR satellite images from Landsat, Terra-ASTER, Sentinel-2, and Sentinel-1 satellite missions. The overall calving front mapping uncertainty across Svalbard is 31 m. The newly derived calving front dataset agrees well with recent decadal calving front observations between 2000 and 2020 (Kochtitzky and Copland, 2022) and an annual calving front dataset between 2008 and 2022 (Moholdt et al., 2022). The calving fronts between our product and the latter deviate by 32 ± 65 m on average. The R2 of the glacier calving front change rates between these two products is 0.98, indicating an excellent match. Using this new calving front dataset, we identified widespread calving front retreats during the past four decades, across most regions in Svalbard except for a handful of glaciers draining the ice caps Vestfonna and Austfonna on Nordaustlandet. In addition, we identified complex patterns of glacier surging events overlaid with seasonal calving cycles. These data and findings provide insights into understanding glacier calving mechanisms and drivers. This new dataset can help improve estimates of glacier frontal ablation as a component of the integrated mass balance of marine-terminating glaciers.

Accurate and fast implementation of soybean pod counting and localization from high-resolution image.

Soybean pod count is one of the crucial indicators of soybean yield. Nevertheless, due to the challenges associated with counting pods, such as crowded and uneven pod distribution, existing pod counting models prioritize accuracy over efficiency, which does not meet the requirements for lightweight and real-time tasks. To address this goal, we have designed a deep convolutional network called PodNet. It employs a lightweight encoder and an efficient decoder that effectively decodes both shallow and deep information, alleviating the indirect interactions caused by information loss and degradation between non-adjacent levels. We utilized a high-resolution dataset of soybean pods from field harvesting to evaluate the model's generalization ability. Through experimental comparisons between manual counting and model yield estimation, we confirmed the effectiveness of the PodNet model. The experimental results indicate that PodNet achieves an R2 of 0.95 for the prediction of soybean pod quantities compared to ground truth, with only 2.48M parameters, which is an order of magnitude lower than the current SOTA model YOLO POD, and the FPS is much higher than YOLO POD. Compared to advanced computer vision methods, PodNet significantly enhances efficiency with almost no sacrifice in accuracy. Its lightweight architecture and high FPS make it suitable for real-time applications, providing a new solution for counting and locating dense objects.

Long-term exposure to ambient PM2.5, particulate constituents and hospital admissions from non-respiratory infection

The association between PM2.5 and non-respiratory infections is unclear. Using data from Medicare beneficiaries and high-resolution datasets of PM2.5 and its constituents across 39,296 ZIP codes in the U.S between 2000 and 2016, we investigated the associations between annual PM2.5, PM2.5 constituents, source-specific PM2.5, and hospital admissions from non-respiratory infections. Each standard deviation (3.7-μg m−3) increase in PM2.5 was associated with a 10.8% (95%CI 10.8–11.2%) increase in rate of hospital admissions from non-respiratory infections. Sulfates (30.8%), Nickel (22.5%) and Copper (15.3%) contributed the largest weights in the observed associations. Each standard deviation increase in PM2.5 components sourced from oil combustion, coal burning, traffic, dirt, and regionally transported nitrates was associated with 14.5% (95%CI 7.6–21.8%), 18.2% (95%CI 7.2–30.2%), 20.6% (95%CI 5.6–37.9%), 8.9% (95%CI 0.3–18.4%) and 7.8% (95%CI 0.6–15.5%) increases in hospital admissions from non-respiratory infections. Our results suggested that non-respiratory infections are an under-appreciated health effect of PM2.5.

DaliWS: A High-Resolution Dataset with Precise Annotations for Water Segmentation in Synthetic Aperture Radar Images

The frequent occurrence of global flood disasters leads to millions of people falling into poverty each year, which poses immense pressure on governments and hinders social development. Therefore, providing more data support for flood disaster detection is of paramount importance. To facilitate the development of water body detection algorithms, we create the DaliWS dataset for water segmentation, which contains abundant pixel-level annotations, and consists of high spatial resolution SAR images collected from the GaoFen-3 (GF-3) satellite. For comprehensive analysis, extensive experiments are conducted on the DaliWS dataset to explore the performance of the state-of-the-art segmentation models, including FCN, SegNeXt, U-Net, and DeeplabV3+, and investigate the impact of different polarization modes on water segmentation. Additionally, to probe the generalization of our dataset, we further evaluate the models trained with the DaliWS dataset, on publicly available water segmentation datasets. Through detailed analysis of the experimental results, we establish a valuable benchmark and provide usage guidelines for future researchers working with the DaliWS dataset. The experimental results demonstrate the F1 scores of FCN, SegNeXt, U-Net, and DeeplabV3+ on the dual-polarization data of DaliWS dataset reach to 90.361%, 90.192%, 92.110%, and 91.199%, respectively, and these four models trained using the DaliWS dataset exhibit excellent generalization performance on the public dataset, which further confirms the research value of our dataset.

Cyanopeptolins and Anabaenopeptins Are the Dominant Cyanopeptides from Planktothrix Strains Collected in Canadian Lakes.

Common bloom-forming cyanobacteria produce complex strain-specific mixtures of secondary metabolites. The beneficial and toxic properties of these metabolite mixtures have attracted both research and public health interest. The advancement of mass spectrometry-based platforms and metabolomics data processing has accelerated the identification of new metabolites and feature dereplication from microbial sources. The objective of this study was to use metabolomics data processing to decipher the intracellular cyanopeptide diversity of six Planktothrix strains collected from Canadian lakes. Data-dependent acquisition experiments were used to collect a non-targeted high-resolution mass spectrometry dataset. Principal component analysis and factor loadings were used to visualize cyanopeptide variation between strains and identified features contributing to the observed variation. GNPS molecular networking was subsequently used to show the diversity of cyanopeptides produced by the Planktothrix strains. Each strain produced a unique mixture of cyanopeptides, and a total of 225 cyanopeptides were detected. Planktothrix sp. CPCC 735 produced the most (n = 68) cyanopeptides, and P. rubescens CPCC 732 produced the fewest (n = 27). Microcystins and anabaenopeptins were detected from all strains. Cyanopeptolins, microviridins and aeruginosins were detected from five, four and two strains, respectively. Cyanopeptolin (n = 80) and anabaenopeptin (n = 61) diversity was the greatest, whereas microcystins (n = 21) were the least diverse. Interestingly, three of the P. rubescens strains had different cyanopeptide profiles, despite being collected from the same lake at the same time. This study highlights the diversity of cyanopeptides produced by Planktothrix and further hints at the underestimated cyanopeptide diversity from subpopulations of chemotypic cyanobacteria in freshwater lakes.