Regional climate variability is considered to be the major factor causing the advancement in global warming. Its effect influences precipitation patterns, which are more sensitive for monsoon dominated region like India. High-resolution (0.5°x0.5°) climate models play a significant role to understand variation in rainfall amount through simulations of various types of ambient parameters such as an atmospheric parameter-relative humidity (RH) (at 850 hPa), a cloud macrophysical parameter-cloud fraction (CF) (total column), a radiance parameter-outgoing longwave radiation (OLR) (total column) and a precipitation parameter-precipitation rate (PR) (total column). These parameters are studied over two different regions-an inland region which has more heterogeneity (central India-M.P.) as well as over coastal region which has less heterogeneity (western India-Gujarat) to understand spatial heterogeneity. The present study show daily averaged data of monsoon (June-September) from 2003 to 2017 for selected parameters over these regions with the help of linear correlation method with their uncertainties, which uses satellite (AIRS and TRMM) and model (RegCM 4.4) data. In this study, simulations are carried out by implementing Grell convective scheme during different rainfall scenarios. Results show that the correlation values are ∼ 0.35, ∼ 0.68, ∼ 0.58 and ∼ 0.18 for RH, CF, OLR and PR respectively, which signify good correlation coefficients during deficit years over coastal region. Also, these correlation values are almost same but their uncertainties are minimum for deficit as compared to normal and excess rainfall years. It shows that deficit rainfall scenarios are captured well over coastal regions as compared to excess rainfall scenarios, which is may be due to the rainfall departure as deficit rainfall years are less extreme (∼−22.34%) than excess rainfall years (∼42.12%). Further study continues to understand regional heterogeneity with respect to rainfall departure during excess and normal rainfall years. Further statistics can be improved with the simulation of more number of atmospheric/cloud parameters. Studies may be useful to determine heterogeneity and can be utilized in climate models, which further can help to improve weather predictability.