Gd2Zr2O7 is considered a promising host material for immobilizing high-level radioactive waste. However, its interplay between grain sizes, radiation resistance and chemical stability is not well understood yet. Herein, Gd1.7Nd0.3Zr0.5Ce1.5O7 ceramics with defect-fluorite phase and three different grain sizes (96, 390 and 1959 nm) were successfully fabricated and irradiated by 140 keV He ion beam up to a fluence of 8 × 1017 ions/cm2. Phase evolutions, microstructure changes and chemical stabilities were investigated. The nano-grained ceramic exhibits the lowest degree of amorphization and a delayed irradiation-induced lattice expansion and damage evolution process, demonstrating an enhanced ability in suppressing the coalescence of He bubbles inside the grain. Grain boundaries parallel to the surface were found to be more favorable sinks for irradiation-induced defects. Chemical stability tests showed that the 42 days leaching rates of all elements were between 10−7∼10−5 g/m2·d. All samples have maintained this superior chemical stability even after irradiation. Interestingly, the leaching test results also suggested that grain size may be not the primary factor influencing the long-term leaching rate.