AbstractThe question: ‘how does a streambed change over a minor flood?’ does not have a clear answer due to lack of measurement methods during high flows. We investigate bedload transport and disentrainment during a 1.5‐year flood by linking field measurements using fiber optic distributed temperature sensing (DTS) cable with sediment transport theory and an existing explicit analytical solution to predict depth of sediment deposition from amplitude and phase changes of the diurnal near‐bed pore‐water temperature. The method facilitates the study of gravel transport by using near‐bed temperature time series to estimate rates of sediment deposition continuously over the duration of a high flow event coinciding with bar formation. The observations indicate that all gravel and cobble particles present were transported along the riffle at a relatively low Shields Number for the median particle size, and were re‐deposited on the lee side of the bar at rates that varied over time during a constant flow. Approximately 1–6% of the bed was predicted to be mobile during the 1.5‐year flood, indicating that large inactive regions of the bed, particularly between riffles, persist between years despite field observations of narrow zones of local transport and bar growth on the order ~3–5 times the median particle size. In contrast, during a seven‐year flood approximately 8–55% of the bed was predicted to become mobile, indicating that the continuous along‐stream mobility required to mobilize coarse gravel through long pools and downstream to the next riffle is infrequent. Copyright © 2017 John Wiley & Sons, Ltd.