Hevea Research Articles

Transcriptomic and Proteomic Integration Reveals Key Tapping-Responsive Factors for Natural Rubber Biosynthesis in the Rubber Tree Hevea brasiliensis

Natural rubber is a crucial industrial material, and it is primarily harvested from the latex of the rubber tree Hevea brasiliensis by tapping the tree trunk. During the regular tapping process, mechanical damage seriously affects latex reproduction and rubber yield, but the molecular mechanisms on tapping stimulation remain unclear. In this study, we firstly determined the changed physiological markers on latex regeneration, overall latex yield, and latex flow time during the tapping process. Then, we combined proteomics and transcriptomics analyses of latex during tapping and identified 3940 differentially expressed genes (DEGs) and 193 differentially expressed proteins (DEPs). Among them, 773 DEGs and 120 DEPs displayed a persistent upregulation trend upon tapping. It is interesting that, in the detected transcription factors, basic helix-loop-helix (bHLH) family members occupied the highest proportion among all DEGs, and this trend was similarly observed in DEPs. Notably, 48 genes and 34 proteins related to natural rubber biosynthesis were identified, and most members of small rubber particle protein (SRPP) and rubber elongation factor (REF) showed a positive response to tapping stimulation. Among them, SRPP6 and REF5 showed significant and sustained upregulation at the gene and protein levels following tapping, indicating their pivotal roles for post-tapping rubber biosynthesis. Our results deepen the comprehension of the regulation mechanism underlying tapping and provide candidate genes and proteins for improving latex production in the Hevea rubber tree in future.

Effects of High-Temperature Stress on Biological Characteristics of Coccophagus japonicus Compere.

The parasitoid, Coccophagus japonicus Compere (Hymenoptera: Aphelinidae) is a dominant natural enemy of Parasaissetia nigra Nietner (Hemiptera: Coccidae), an important pest of rubber trees. Much of Chinese rubber is cultivated in hotter regions such as Yunnan and Hainan, exposing applied parasitoids to non-optimal temperatures. Therefore, C. japonicus must adapt to avoid temperature-related impacts on survival and population expansion. In this study, we monitored the survival rate, developmental duration, parasitism rate, and fecundity of C. japonicus during short-term exposures to 36 °C, 38 °C, and 40 °C for 2, 4, and 6 h, as well as continuous exposures to 32 °C and 34 °C for 3 days. The results show that short-term exposure to high-temperature stress leads to decreased survival rate of C. japonicus larvae and pupae, with survival rates declining as temperature and duration increase. High-temperature stress also delayed insect development, reduced mature egg production, shortened the body length of newly emerged females, and decreased female lifespans. Moreover, continuous high-temperature stress was found to significantly impact the development and reproduction of C. japonicus. Compared with the CK (27 °C), 3 d of continuous exposure to 34 °C prolonged developmental duration, shortened the body length and lifespan of newly emerged females, reduced survival rate and single female fecundity, and significantly decreased offspring numbers and parasitism rates. Temperatures of 36 °C, 38 °C, and 40 °C decreased the mortality time of adult females to 28.78, 16.04, and 7.91 h, respectively. Adverse temperatures also affected the insects' functional response, with 8 h of stress at 36 °C, 38 °C, and 40 °C causing the control efficiency of C. japonicus on P. nigra. This level of stress in the parasitoids was found to reduce the immediate attack rate and search effect, prolong processing time, and attenuate interference between small prey. Parasitoid efficiency was lowest following exposure to 40 °C. In this study, we determined the range of high temperatures that C. japonicus populations can tolerate under short- or long-term stress, providing guidance for future field applications.

Five new species of endophytic Penicillium from rubber trees in the Brazilian Amazon.

The Amazon rainforest is the world's most diverse ecosystem, full of fauna and flora. Among the trees that make up the forest are the rubber trees of the genus Hevea (H. brasiliensis and H. guianensis), which stand out for the industrial use of latex. It was previously shown that endophytic fungi colonize the leaves, stems, and roots of Hevea spp. In this study, 47 Penicillium spp. and three Talaromyces spp. isolates were analyzed using specific DNA barcodes: internal transcribed spacers region (ITS), β-tubulin (BenA), calmodulin (CaM), and the DNA-dependent RNA polymerase II second largest subunit (RPB2) genes and additionally, for species delimitation, the genealogical concordance phylogenetic species recognition (GCPSR) criteria were applied. The phylogenetic analyses placed the Penicillium isolates into four sections Lanata-Divaricata, Sclerotiora, Citrina, and Fasciculata. The morphological and molecular characteristics resulted in the discovery of five new species (P. heveae sp. nov., P. acrean sp. nov., P. aquiri sp. nov., P. amazonense sp. nov., and P. pseudomellis sp. nov.). The five new species were also compared to closely related species, with observations on morphologically distinguishing features and colony appearances. Bayesian inference and maximum likelihood analysis have supported the placement of P. heveae sp. nov. as a sister group to P. globosum; P. acrean sp. nov. and P. aquiri sp. nov. as sister groups to P. sumatrense; P. amazonense sp. nov. closely related to isolates of P. rolfsii, and P. pseudomellis sp. nov. closely related to P. mellis. The study of endophytic Penicillium species of rubber trees and the description of five new taxa of Penicillium sect. Citrina, Lanata-Divaricata, and Sclerotiora as endophytes add to the fungal biodiversity knowledge in native rubber trees. Reports of fungi in native tropical plants may reveal taxonomic novelties, potential pathogen control agents, and producers of molecular bioactive compounds of medical and agronomic interest.

Dendrochronology Applied to Three Forest Species in the Brazilian Amazon

Sustainable forest management is a legal alternative to combat deforestation and preserve natural resources in the long term. However, the lack of information on the growth and productivity of forests and individual species compromises its effectiveness. To obtain this information, dendrochronological techniques can be used. The aim of the study was to evaluate the dendrochronological potential of three tree species found in terra firme tropical rainforests: Astronium graveolens Jacquin, Hevea brasiliensis (Willd. ex A.Juss.) Müll.Arg., and Inga cylindrica (Vell.) Mart. The method involved collecting disks from the base of the trees (cross-dating), preparing the disks through polishing and scanning, and analyzing the growth rings based on anatomical characteristics. This technique is essential for understanding forest growth patterns, assessing tree responses to environmental changes, and supporting sustainable forest management practices. The three species showed distinct and visible growth rings to the naked eye. H. brasiliensis was classified as distinct, while A. graveolens and I. cylindrica were classified as less distinct. The dendrochronological analysis indicated that the three species presented a correlation between the growth ring series, with A. graveolens and H. brasiliensis showing an average correlation of 0.568 and 0.575, respectively, and I. cylindrica 0.3281. By analyzing the Master series, high growth peaks were identified for H. brasiliensis in 2012, 2013, 2016, 2017, and 2021, for A. graveolens in 1996, 1982, 2011, 2020, and 2005, and for I. cylindrica in 1989, 2001, 2008, 2010, 2014, 2016, and 2017. The species have dendrochronological potential and can contribute to the study of the cycle and minimum cutting diameter in forest management.

Strategies for identification of elite Hevea brasiliensis genotypes tolerant to ALF disease from half-sib and full-sib population

Natural Rubber (NR) from Hevea brasiliensis tree is an important commercial commodity worldwide. In general, many Hevea cultivars are vulnerable to abnormal leaf fall (ALF) disease caused by Phytophthora spp., which can lead to considerable reduction in crop production. Chemical control of ALF by spraying mineral oil-based copper fungicides is the conventional approach which is harmful to the ecosystem. Development of ALF tolerant varieties of Hevea through conventional breeding is the major objectives of this study. We evaluated the primary agronomy traits and ALF tolerance level of the newly developed Hevea clones using in vitro leaf disc bioassay as well as field screening for disease incidence consecutively for three years. Variation in disease infestation was observed among genotypes. Based on field screening, the clones which showed better field tolerance against ALF than the parental clones were selected. Clone 683 was identified as one of the most desirable genotypes which had vigorous growth as well as high crop yield in addition to ALF tolerance. The study also confirms the reliability of in vitro leaf disc bioassay technique for screening against ALF across genotypes for its inherent variability. This technique is rapid and easier and can be completed within 96 hours. This approach could reduce the burden of screening larger breeding population to a manageable size to enhance the efficiency of selection in ALF disease resistance breeding programs. Selected fast growing, high yielding ALF tolerant clones, could be further evaluated in on farm trials for recommending to the growers in the traditional region of rubber growing tracts.

Rubber seed shell as low-cost medium to produce lactic acid using Lactobacillus plantarum LB2 and fabrication of a polylactic acid-chitosan composite for fish fillet packing

Rubber seed shell (Hevea brasiliensis) was used as a low-cost substrate to produce lactic acid via Lactobacillus plantarum LB2. The medium components were initially screened by two-level full factorial design. Three variables (pH, moisture, and polyoxyethylene sorbitan monooleate (PSM)) were used in the central composite design and response surface methodology. The amount of PSM was found to be a significant variable in lactic acid production. Lactic acid was purified and used for the chemical fabrication of a polylactic acid-chitosan composite film. Compared with the polylactic acid, the composite film improved the tensile strength, elongation strength, and tearing strength. The film prepared with 1% chitosan-polylactic acid exhibited the maximum antibacterial activity against Bacillus cereus (21 ± 1 mm) and the lowest activity against Escherichia coli (10 ± 1 mm). The polylactic acid-chitosan film prepared with 1% chitosan was used as a packing material to store the fish fillets and presented reduced mesophilic (4.3 ± 0.1 Log CFU/g) and psychrotropic (3.2 ± 0.2 Log CFU/g) bacterial populations compared with those of the control (4.9 ± 0.2 Log CFU/g and 3.7 Log CFU/g). Rubber seed shells can be used as an alternative culture medium for lactic acid production, to reduce the production cost of polylactic acid.

Genome-Wide Identification of the Geranylgeranyl Pyrophosphate Synthase (GGPS) Gene Family Associated with Natural Rubber Synthesis in Taraxacum kok-saghyz L. Rodin.

Taraxacum kok-saghyz Rodin (TKS) is a recognized alternative source of natural rubber comparable to the rubber tree. The geranylgeranyl pyrophosphate synthase (GGPS) catalyzed the synthesis of geranylgeranyl pyrophosphate (GGPP), which is an important enzyme in the secondary metabolism pathway. In this study, we present the first analysis of the GGPS gene family in TKS, where a total of seven TkGGPS family members were identified. Their core motifs, conserved structural domains, gene structures, and cis-acting elements were described. In addition, two phylogenetic trees were constructed based on the Neighbor-Joining and Maximum-Likelihood methods, and the TkGGPSs were highly conserved and exhibited good collinearity with the other species. Transcriptome data showed that seven TkGGPS gene members were expressed in all the 12 tissues measured, and TkGGPS1, TkGGPS3, and TkGGPS6 were highly expressed in latex, suggesting that they may be associated with natural rubber synthesis. Meanwhile, quantitative real-time PCR (qRT-PCR) showed that the expression levels of the TkGGPS genes were regulated by the ethylene and methyl jasmonate (MeJA) pathways. Subcellular localization results indicated that all the TkGGPS proteins were also located in chloroplasts involved in photosynthesis in plants. This study will provide valuable insights into the selection of candidate genes for molecular breeding and natural rubber biosynthesis in TKS.

Resilience underground: Understanding earthworm biomass responses to land use changes in the tropics

Soil biodiversity, like terrestrial biodiversity, is currently under threat by changes in land use. Intensively managed farming activities with agrochemicals have degraded both soil biodiversity and health. However, little is known about how these changes in land use affect the distribution of earthworm biomass in Southeast Asia. We conducted earthworm sampling across multiple habitats, including lowland forests, exotic monoculture plantations (e.g., oil palm and rubber tree), and agroforestry orchards. To survey earthworm populations, we excavated the top 30 cm of soil at 18 sites encompassing 399 plots distributed across natural and human-modified ecosystems in Selangor and Negeri Sembilan, Peninsular Malaysia. We found that earthworm abundance was negatively related to increasing soil compaction, leaf litter weight, soil pH, and undergrowth height, whereas it was positively associated with increasing undergrowth and canopy cover. Our findings demonstrated that agroforestry orchards, rubber tree plantations, and mature oil palm plantations had higher earthworm abundance than those in logged lowland forests. Earthworm abundance in unlogged lowland forests and young oil palm plantations, on the other hand, was lower than in logged lowland forests. Overall earthworm weight was greater in rubber tree plantations, agroforestry orchards, mature oil palm plantations, and unlogged lowland forests than those in logged lowland forests, while young oil palm plantations exhibited lower earthworm weight than logged lowland forests. Our data indicate that increases in soil compaction and leaf litter weight were associated with decreased earthworm weight. These results demonstrate the importance of site-level habitat management for maintaining healthy earthworm populations and soil biodiversity.

Enhancing bioenergy and feed production in Southern Thailand: An approach through Leucaena cultivation and hydrothermal carbonization

This study addresses sustainability challenges in Southern Thailand, particularly the scarcity of biomass fuel and animal feed. It investigates the integration of Leucaena leucocephala cultivation with hydrothermal carbonization. The research compares the biomass yield and economic feasibility of growing Leucaena as a sole crop versus intercropping it with Para rubber trees. Sole cropping Leucaena produces higher biomass yields and is more economically viable. The wood stem of Leucaena is competitive with other biomass fuels used in local power plants, while its leaves, with over 14 % protein content, meet local animal feed market standards. Additionally, branches, which constitute 15.15 % to 30.58 % of the total biomass, are usually left as residue but can be used for hydrochar production. The study examines the effects of temperature (235 °C and 265 °C) and retention time (1, 2, and 3 hours) on hydrochar properties. Optimal condition (265 °C for 1 hour) produces hydrochar with high heating value and energy yield. Using these branches for hydrochar can significantly boost total revenue, with hydrochar contributing 54.9 % to overall revenue (4522.00 USD/ha). Integrating Leucaena cultivation with hydrothermal carbonization offers a sustainable solution, enhancing revenue, supporting local energy and feed needs, and promoting environmental sustainability.

Cellulose nanofibers-based UV resistant and hydrophobic wood coatings

Wood and wood-based products are regarded as sustainable building materials, nonetheless, they frequently need the addition of protective coatings due to their susceptibility to abiotic and biotic degrading elements. Among the coating systems, water-borne coatings are a better choice since the majority of popular wood coatings are solvent-based and release volatile organic chemicals (VOCs). In this study, cellulose nanofibers (CNFs) were isolated from eucalyptus wood pulp using a chemo-mechanical method and used as the base substrate for wood coatings. The effect of CNF dispersion with varying concentrations (0.5 and 1 wt.%) of zinc oxide (ZnO) nanoparticles on UV-resistance of Pinus radiata and Hevea brasiliensis after 500 hrs of exposure was assessed. Wood surfaces without coating exhibited severe discolouration after 500 hrs of UV exposure. Only CNF-coating results in slight protection of wood surfaces from weathering but significantly increased water wettability of the surface. The incorporation of ZnO nanoparticles significantly reduced the colour change of the wood surfaces. As the concentration of ZnO increased, the colour stability and hydrophobicity of both the wood increased.

The rubber tree that changed the world in 150 years

The rubber tree that changed the world in 150 years

Current status and prospects of research on main diseases of rubber trees

Current status and prospects of research on main diseases of rubber trees

Genome-Wide Identification of Rubber Tree SCAMP Genes and Functional Characterization of HbSCAMP3.

Natural rubber produced by the rubber tree is a vital industrial raw material globally. Seven SCAMP gene family members were identified in the rubber tree, and the phylogenetic tree classified HbSCAMPs into three subfamilies. Significant differences were observed among HbSCAMPs in terms of gene length, number of exons, and composition of conserved motifs. The expansion of HbSCAMPs in the rubber tree genome is associated with segmental duplications. The high expression of HbSCAMP1-6 in petioles and HbSCAMP7 in stem tips, along with their distinct responses to drought, salt, and wound stresses, indicates their crucial roles in substance transport and stress adaptation. Transgenic poplar experiments demonstrated that overexpression of HbSCAMP3 significantly promotes plant height growth, with localization in the tobacco plasma membrane, suggesting its involvement in regulating plant growth through membrane transport processes. These findings enhance the understanding of HbSCAMPs in rubber trees and provide new insights into how plants finely tune gene family members to adapt to environmental changes.

Assessing Drought Impacts on Gross Primary Productivity of Rubber Plantations Using Flux Observations and Remote Sensing in China and Thailand

Rubber (Hevea brasiliensis Muell.) plantations are vital agricultural ecosystems in tropical regions. These plantations provide key industrial raw materials and sequester large amounts of carbon dioxide, playing a vital role in the global carbon cycle. Climate change has intensified droughts in Southeast Asia, negatively affecting rubber plantation growth. Limited in situ observations and short monitoring periods hinder accurate assessment of drought impacts on the gross primary productivity (GPP) of rubber plantations. This study used GPP data from flux observations at four rubber plantation sites in China and Thailand, along with solar-induced chlorophyll fluorescence (SIF), enhanced vegetation index (EVI), normalized difference vegetation index (NDVI), near-infrared reflectance of vegetation (NIRv), and photosynthetically active radiation (PAR) indices, to develop a robust GPP estimation model. The model reconstructed eight-day interval GPP data from 2001 to 2020 for the four sites. Finally, the study analyzed the seasonal drought impacts on GPP in these four regions. The results indicate that the GPP prediction model developed using SIF, EVI, NDVI, NIRv, and PAR has high accuracy and robustness. The model’s predictions have a relative root mean square error (rRMSE) of 0.22 compared to flux-observed GPP, with smaller errors in annual GPP predictions than the MOD17A3HGF model, thereby better reflecting the interannual variability in the GPP of rubber plantations. Drought significantly affects rubber plantation GPP, with impacts varying by region and season. In China and northern Thailand (NR site), short-term (3 months) and long-term (12 months) droughts during cool and warm dry seasons cause GPP declines of 4% to 29%. Other influencing factors may alleviate or offset GPP reductions caused by drought. During the rainy season across all four regions and the cool dry season with adequate rainfall in southern Thailand (SR site), mild droughts have negligible effects on GPP and may even slightly increase GPP values due to enhanced PAR. Overall, the study shows that drought significantly impacts rubber the GPP of rubber plantations, with effects varying by region and season. When assessing drought’s impact on rubber plantation GPP or carbon sequestration, it is essential to consider differences in drought thresholds within the climatic context.

Assembly and maintenance of phyllosphere microbial diversity during rubber tree leaf senescence

Phyllosphere microorganisms execute important ecological functions including supporting host plant growth, enhancing host resistance to abiotic stresses, and promoting plant diversity. How leaf developmental stages affect plant-microbiome interactions and phyllosphere microbial community assembly and diversity is poorly understood. In this study, we utilized amplicon sequencing of 16S rRNA and ITS genes to investigate the composition and diversity of microbial communities across different leaf developmental stages of rubber trees. Our findings reveal that endophytic microbial communities, particularly bacterial communities, are more influenced by leaf senescence than by epiphytic communities. The high abundance of metabolism genes in the endosphere of yellow leaves contributes to the degradation and nutrient relocation processes. Nutrient loss leads to a higher abundance of α-Proteobacteria (r-selected microorganisms) in the yellow leaf endosphere, thereby promoting stochastic community assembly. As leaves age, the proportion of microorganisms entering the inner layer of leaves increases, consequently enhancing the diversity of microorganisms in the inner layer of leaves. These results offer insights into the mechanisms governing community assembly and diversity of leaf bacteria and fungi, thereby advancing our understanding of the evolving functions of microbial communities during leaf senescence in general, and for an important tropical crop species in particular.

Variation in specific gravity and shrinkage of tapped rubberwood

Hevea brasiliensis (rubber tree), a major source of natural rubber, could also be an important source of lumber as senescence occurs. However, latex collection is known to affect Hevea brasiliensis (rubber tree) wood formation and consequently, wood properties. The impact tapping (cutting made in the bark of the tree for latex harvest) has on the tree and the way the tree responds after tapping is often overlooked. Knowledge on wood properties of tapped rubber trees in Nigeria would enhance its sustainable utilization which is especially important in developing countries where lumber is limited. Variation in specific gravity and shrinkage of rubberwood wood due to tapping duration was examined. Tapping duration had significant effect in specific gravity and longitudinal shrinkage of rubberwood but had no effect on tangential and radial shrinkage. The specific gravity (SG) of rubberwood ranged from 0,55 - 0,59. Longitudinal shrinkage (average 1,42 %) was higher than typically observed for mature wood. Average tangential shrinkage for rubberwood of all the ages was 5,37 % while radial shrinkage ranged from 2,87 % to 3,84 %. decrease in SG observed in trees tapped for 20 years may indicate the initiation of senescence. Tapped rubberwood could be used in areas not exposed to high moisture as well as in other wood composites.

In silico analysis of secreted effectorome of the rubber tree pathogen Rigidoporus microporus highlights its potential virulence proteins.

Rigidoporus microporus, the causative agent of the white root rot disease of rubber trees, poses a significant threat to natural rubber production worldwide. Understanding the molecular mechanisms facilitating its pathogenicity would be crucial for developing effective disease management strategies. The pathogen secretes effector proteins, which play pivotal roles in modulating host immune responses and infection. In this study, in silico analyses identified 357 putative secreted effector proteins from the R. microporus genome. These were then integrated into previous RNA-seq data obtained in response to rubber tree latex exposure. Annotation of putative effectors suggested the abundance of proteins in several families associated with the virulence of R. microporus, especially hydrophobin proteins and glycoside hydrolase (GH) proteins. The contribution of secreted effectors to fungal pathogenicity was discussed, particularly in response to rubber tree latex exposure. Some unknown highly expressed effectors were predicted for the protein structures, revealing their similarity to aminopeptidase, ubiquitin ligase, spherulin, and thaumatin protein. This integrative study further elucidates the molecular mechanism of R. microporus pathogenesis and offers alternative targets for developing control strategies for managing white root rot disease in rubber plantations.

Assessment of Agro-morphological Parameters of Two Accessions of Undergrowth Yam (Dioscorea sp.) Cultivated in the Inter-rows of Mature Rubber Trees (Hevea brasiliensis) in Daloa, Côte d’Ivoire

The valorization of mature rubber tree inter-rows by food crops could solve the problem of food insecurity in rubber tree-growing areas. This study aims to assess the agro-morphological parameters of understory yams sown under mature rubber trees. To this end, a trial was carried out in Daloa on a mature rubber tree plantation and a control plot of sole yam. Two accessions of undergrowth yams, “Bacoué” and “Soupkataloa”, were grown in the rubber tree inter-rows and monoculture. The experimental design was a completely randomized block with 15 repetitions. The parameters measured on the yams were emergence rate, specific leaf area (SLA), number of days to emergence, number of days to first leaf, stem height (Ht), crown diameter (CD) and production. The results showed that the accessions tested under rubber trees emerged relatively well, with 66.67% and 70.83% rates for Bacoué and Soupkataloa, respectively. These combined accessions also showed the largest SLAs of 343 cm2/g for Bacoué and 328.5 cm2/g for Soupkataloa during the dry season. However, emergence was late under the rubber trees compared with the yam monoculture. Bacoué emerged 179.19 d after sowing and had its first leaves 42.88 d later, whereas these values were 58.18 d and 11.71 d respectively for Soupkataloa. However, although Bacoué performed better, with an Ht of 825 cm in 70 days and a large CD (11.18 mm), its production was identical to that of Soupkataloa. These results show that undergrowth yams can be combined with mature rubber trees to guarantee food security.

Insights into pathogenicity mechanisms of Phytophthora meadii, the abnormal leaf fall pathogen in rubber tree, through whole genome sequencing and analysis

Hevea brasiliensis (Willd. ex A.Juss.) Müll. Arg., also known as the Para rubber tree is the main commercial source of natural rubber. Phytophthora meadii causing abnormal leaf fall (ALF) disease is the most destructive and recurrent disease of rubber trees in India, leading to significant annual economic losses. To comprehend its pathogenic mechanisms and investigate stratagems for disease control, whole-genome sequencing and analysis of P. meadii were conducted. The P. meadii genome was sequenced using the standard Illumina Novaseq 6000 Platform. The assembled P. meadii genome is approximately 53 Mb in size, consisting of 13,171 contigs with an N50 of 7105 and a BUSCO completeness of 96 %. A total of 14,646 protein-coding genes were predicted, with an average GC content of 49.96 %. P. meadii's genome contains 750 carbohydrate-active enzymes (CAZymes), which is notably higher compared to closely related species. Five genomic regions potentially encoding enzymes for secondary metabolite production and 1877 pathogenic proteins were also identified. Our data confirm the phylogenetic positioning of P. meadii as a distinct species and indicate that it forms a closely related clade with P. citrophthora. Analyzing the P. meadii genome not only aids in understanding its genomic traits but also facilitates the identification of genes related to pathogenesis and will give a better understanding of the Hevea – Phytophthora interaction.

Euphorbiaceae superoxide dismutase, catalase, and glutathione peroxidase as clues to better comprehend high drought tolerance in castor bean

Superoxide dismutase (SOD), Catalase (CAT), and Glutathione peroxidase (GPX) enzymes exert a central role in reactive oxygen species (ROS) scavenger in plants, being an important part of enzymatic antioxidant system. Despite the importance of these enzymes in ROS metabolism and in different signaling pathways related to plant development and stress response, their gene families have not yet been comprehensively characterized in many crop plants. Among different crops, the Euphorbiaceae family has some species highly tolerant to drought stress. However, the gene families that encode the antioxidant enzymes, as well as their role in this drought stress tolerance, remains not characterized. Here, the SOD, CAT, and GPX genes of castor bean (Ricinus communis), cassava (Manihot esculenta), jatropha (Jatropha curcas), rubber tree (Hevea brasiliensis), petty spurge (Euphorbia peplus), and annual mercury (Mercurialis annua) were identified and characterized. The comprehensive phylogenetic and genomic analyses allowed the classification of the genes into different classes and revealed the duplication events that contribute to the expansion of these families within plant genomes. The expression patterns of SOD, CAT, and GPX genes were examined in castor bean, cassava, jatropha, and rubber tree by RNA-seq analysis revealing differential expression during stress. Additionally, the castor bean gene expression was confirmed by RT-qPCR. Among castor bean genes, RcGPX4 appears to be induced in castor bean roots under drought stress, but the heterologous expression in Arabidopsis thaliana does not improve the drought tolerance. Altogether, this data has significantly contributed to characterizing the expression patterns and conducting evolutionary assessment of these genes in Euphorbiaceae. This bridge a gap in understanding the proposed functions of core components within the antioxidant mechanism in an economically significant group of plants, particularly during stress responses