Herd Level Research Articles

Salmonellosis in Ukraine: An analysis of food products contamination, Salmonella transmission, and serovar diversity during 2012–2023

A laboratory-based surveillance was conducted to study the transmission of Salmonella infection in Ukraine during the period 2012-2023. The study focused on the different categories of food products, feed, and animals as the main transmission factors and tried to analyze the relationship between them. The serological profile of Salmonella was predominantly observed in samples from objects of veterinary control, including biological/pathological material from animals and biomaterials from poultry within the National Poultry Salmonellosis Control Program. The study found that the most frequently isolated serovars were S. Enteritidis (20.03%), followed by S. Typhimurium (14.76%), S. Pullorum (without biovar identification;10.71%), S. Pullorum biovar Pullorum (10.50%), S. Pullorum var. Gallinarum (6.62%), S. Choleraesuis (5.79%), S. Livingstone (2.53%), and S. Infantis (1.70%). In 2021, an isolate of monophasic S. Typhimurium was identified for the first time in pathological material from pigs. The study also found that the most frequent Salmonella-positive categories of food products in Ukraine were meat and meat products (78.16%), eggs and egg products (11.75%); dairy products (3.319%), fish products (2.71%), ready-to-eat food products (1.96%). The largest specific share of Salmonella isolates from food products and feed was S. Enteritidis, followed by serotypes such as S. Infantis, S. Typhimurium, S. Livingstone, S. Virchow, and rare serotypes such as S. Nigeria and S. Thompson. The dominance of certain serovars such as S. Enteritidis, S. Typhimurium, S. Infantis, S. Livingstone, and S. Virchow in biomaterials from sick animals indicates their primary role in the infection of food products of animal origin. Hence, a stress to enhance diagnostic and monitoring frameworks at animal herd levels. The findings of this study can be used as a basis for evidence-based epidemiology, as well as for the implementation of joint steps to improve the effectiveness of control measures against salmonellosis in each region.

Sero-epidemiological study of brucellosis in cattle under pastoral/agro-pastoral and mixed crop-livestock systems in South Omo, southern Ethiopia

BackgroundIn the pastoral/agro-pastoral communities in Ethiopia, like in South Omo, brucellosis constitutes a serious health threat for livestock and the public. The public health risk is especially high in these communities, as their way of life is highly linked with their herds. ObjectiveThe study was conducted to estimate the seroprevalence and identify potential risk factors of cattle brucellosis in South Omo zone in southern Ethiopia. MethodsA total of 614 traditionally managed local zebu female cattle, above six months old, were bled and data on hypothesized risk factors were collected using a semi-structured questionnaire. The preliminary screening of the sera for Brucella antibodies was done using Rose Bengal Plate Test (RBPT) and positive sera were further subjected to complement fixation test (CFT). ResultsThe overall animal level seroprevalence of brucellosis was 2.8 % (95 % CI: 1.72–4.41) while herd level prevalence was 11.3 % (95 % CI: 6.5–19.0). Among the risk factors considered, seroprevalence was associated with herd size, new animal introduction, district, history of occurrence of abortion, and retained fetal membranes (RFM), at both individual- and herd-level (p < 0.05). Higher seroprevalence of brucellosis was observed in cows than heifers and in animals older than 4 years (p < 0.05). Brucella seroprevalence was higher in herds in lowland areas than those in mid-altitude and highlands (p < 0.05). ConclusionThe individual and herd level prevalence observed in our study indicates endemicity of brucellosis and the potential public health threat it poses in pastoral and agro-pastoral areas of southern Ethiopia. The results of the study also suggest that the disease might be responsible for significant losses in cattle productivity due to impaired reproductive performance.

Udder health outcomes in Irish herds participating in CellCheck dry cow consults

The CellCheck Dry Cow Consult (DCC) was developed by the CellCheck Technical Working Group to enable farmers to engage with their nominated vet to develop farm-specific selective dry cow therapy (SDCT) plans, where appropriate. This study evaluated the effect of the DCC on farmer decision-making around dry cow therapy, and the udder health impact of implementing SDCT, in study herds over the 2019 and 2020 dry periods. The DCC was a 3-h consult, delivered and funded as part of the Targeted Advisory Service on Animal Health (TASAH). Herds that completed a DCC were invited to register for a Dry Cow Review the following year. The combined data set for analysis across both years comprised of 439 herds and 25,357 cows. Available herd size ranged from 25 to 800. The median SCC of cows dried off with teat sealant only was 47,000 cells/ml before drying off in 2019 and 48,000 cells/ml at first milk recording in 2020, and 43,000 cells/ml before drying off in 2020 and 39,000 cells/ml at first milking recording in 2021. Following both the 2019 and 2020 dry periods, cows tended to converge toward a similar median SCC early in the following lactation, irrespective of prior dry cow treatment strategy. The uptake of SDCT was greater in Review herds, with 21% of cows receiving teat sealant only in 2020, compared with 16.3% of cows in herds participating in a Consult for the first time in 2020. At an individual cow level, in both years dry period new infection rate (NIR) was approximately 2.7% higher for cows treated with teat sealant only, than for those treated with both dry cow antibiotic tubes and teat sealant, and 1.2% higher than cows treated with antibiotic only. Regardless of treatment, there was a significant association between increasing parity and the risk of a dry period new infection. Increasing herd size had a statistically significant effect on the risk of dry period new infection rates. At a herd level, there was no statistically significant increase in NIR when SDCT was used compared with herds where blanket dry cow therapy was used. While not without risk, SDCT can be successfully implemented in Irish herds; however, constant attention to hygiene and management is essential. Though there are challenges to face, facilitating continued farmer education and engagement with professional guidance will be important.

Dairy cow personality: Consistency in a familiar testing environment

Personality affects the behavior of dairy cows in response to various situations on farm, such as novel or social challenges, which can affect the welfare of individual cows. Personality traits are evaluated through behavioral testing, typically in unfamiliar environments, but this can be a time-consuming process. Using a novel object test (NOT) and a forced human approach test (FHAT), we tested 222 individual dairy cows and retested a subset of cows (n = 78) 8 mo afterward. The aim was to see if personality traits can be identified in a familiar environment and if traits were consistent in between test and retest. Principal component analysis was used to identify personality traits. Extracted components (personality traits) were named according to determining variables (loadings <−0.63 or >0.63). Based on identified personality traits we calculated the intraclass correlation (ICC) coefficient and the differences between personality trait in test and retest to assess consistency. We identified 3 personality traits from NOT measurements (“explorative,” “boldness,” and “sociable”) explaining 85% of the variance and one trait from behavioral measurements in the FHAT (“trusting”) explaining 74% of the variance. Mean ICC of 0.6 with a standard deviation of 0.18 shows that although traits are consistent at herd level, cows react individually in stressful situations. As both tests were carried out in a familiar environment and results are similar to other studies that used unfamiliar environments, we can conclude that tests can be performed in a familiar environment.

Investigating the infection dynamics and molecular detection of Cryptosporidium in Buffaloes in Sylhet, Bangladesh

Cryptosporidiosis, a zoonotic infection impacting both livestock and humans, is inadequately understood in terms of its prevalence and transmission dynamics involving buffaloes in Bangladesh. This research, conducted in the Sylhet division, aimed to explore the prevalence and potential risk factors influencing Cryptosporidium spp. in the faecal samples of 392 buffaloes. Detection of the parasite utilized modified Ziehl-Neelsen staining, with molecular identification achieved through nested PCR (nPCR). The comprehensive analysis revealed 9.18% (36/392) prevalence at the individual animal level and 40.48% (17/42) at the herd level. Age-based analysis revealed fluctuating infection rates of Cryptosporidium spp. in buffaloes across distinct age brackets, with rates of 22.61% in those aged 0–6 months, 5.00% in those aged 6–12 months, and 1.03% in those aged 12–18 months. Diarrheic buffaloes showed a significantly (p < 0.001) higher infection rate (26.67%; 28/105) compared to non-diarrheic buffaloes (2.79%; 8/287). In risk factor analysis, binary logistic regression revealed that buffaloes aged 0–6 months were experiencing a likelihood that is 14.84 times higher to be affected by Cryptosporidium in contrast to their older counterparts (OR = 14.85; p = 0.02). Additionally, diarrhoeic buffaloes were found to be more susceptible to Cryptosporidium compared to healthy buffaloes (OR = 17.50; p < 0.001). A higher stocking density was associated with an increased likelihood of infection in buffaloes (OR = 11.20; p = 0.01). The results of this study emphasize the necessity for targeted interventions, considering factors like diarrheic condition and stocking density, to effectively manage and control cryptosporidiosis in Bangladesh.

Seroepidemiological survey of contagious bovine pleuropneumonia among cattle in El Jazeera State (Central Sudan)

BackgroundContagious bovine pleuropneumonia (CBPP) is an economically important infectious disease that is characterized by a variable course and insidious nature. A cross-sectional study was conducted in El Jazeera State, Central Sudan, to determine the seroprevalence and risk factors of CBPP in cattle from seven localities. A total of 218 serum samples were randomly collected from apparently healthy cattle aged older than 6 months between April and May 2021 and were tested serologically using a commercial ELISA kit.ResultsThe overall seroprevalence of CBPP was 50.5% (110/218). Univariate analysis showed a significant difference (p < 0.05) between sex, locality and water source and seropositivity to CBPP. Multivariate analysis revealed that the independent risk factors (sex, locality and water source) were also statistically significant (p < 0.05). At herd level, out of 20 herds 16 (80%) proved to be positive for CBPP antibodies. It is apparent from the present study that CBPP infection is prevalent among cattle in El Jazeera State, Central Sudan.ConclusionsTo the best of our knowledge, this is the first seroepidemiological study on CBPP infection in Central Sudan. The authors recommend major awareness both in the production area and quarantine centers, as CBPP may result in restrictions on the international trade of animals and animal products.

Bloodborne pathogens in beef herds – a Kansas practitioner’s perspective

Management options for bloodborne diseases depend on preva­lence (herd level and geographic), disease stage and production class. Opportunities to manage disease can be classified ac­cording to disease stage. Newer studies show that, in contrast to older studies, there is not currently a known legal way to clear animals of anaplasmosis. The only currently labeled products for treatment of acute clinical anaplasmosis are injectable oxy­tetracyclines. For a time, an enrofloxacin product (Baytril-CA) was marketed with a label for treatment of anaplasmosis, but the conditional approval application has been withdrawn. Op­portunities for leukosis management are limited to exposure control as there are no effective treatments for animals in the clinical stage and no effective methods to clear infected non-clinical animals. Due to the relatively high prevalence in beef herds, a strict test-and-cull strategy is not practical. Instead identifying animals with high pre-viral load who are most infectious provides an option to decrease disease levels with reasonable economics at the farm level. More research is neces­sary to fully quantify production effects for carrier animals of both bovine leukosis and anaplasmosis.

Estimation of diagnostic sensitivity and specificity of abattoir registrations and bulk tank milk ELISA as herd-level tests for Fasciola hepatica using Bayesian latent class modelling

The common liver fluke, Fasciola hepatica, is a trematode parasite found worldwide, typically with a focal distribution due to its requirement for suitable climatic and environmental conditions to complete its lifecycle. Bovine fasciolosis causes suboptimal production and economic losses, including liver condemnation at slaughter. The lack of reliable diagnostic methods is a disadvantage to the increasing demand for surveillance and control. The aim of this study was to evaluate the diagnostic accuracy of bulk tank milk (BTM) antibody testing and aggregated abattoir registrations (AAR) of liver fluke as herd-level tests for F. hepatica infection using Bayesian latent class models. Data from the abattoirs in 2019–2021 and BTM, sampled in the winter of 2020/2021, were collected from 437 herds on the southwest coast of Norway. The BTM samples were analysed with the SVANOVIR® F. hepatica-Ab ELISA test, with results given as an optical density ratio (ODR), and later dichotomized using the recommended cut-off value from the test manufacturer (ODR ≥0.3). Based on the BTM ELISA test, 47.8% of the herds tested positive. The AAR test was defined as the herd-level proportion of female slaughtered animals registered with liver fluke infection during the study period. For this test, three cut-offs were used (a proportion of 0.05, 0.1 and 0.2). The herds were split into two subpopulations (“Coastal” and “Inland”), which were expected to differ in true prevalence of F. hepatica infection based on climate-related and geographical factors. The diagnostic accuracies of both tests were estimated using Bayesian latent class models with minimally informative priors. Post-hoc analysis revealed that the maximum sum of sensitivity (Se) and specificity (Sp) of the tests was achieved with a herd-level proportion of ≥0.1 registered with liver fluke as the AAR test. Using this cut-off, the median estimate for the diagnostic accuracy of the BTM ELISA was 90.4% (84.0–96.2 95% Posterior Credible Interval (PCI)) for Se and 95.3% (90.6–100% PCI) for Sp, while the median estimate of Se for AAR was 87.5% (81.4–93.1% PCI) and the median estimate of Sp for AAR was 91.0% (85.2–96.5% PCI). The cut-off evaluation of the SVANOVIR® F. hepatica-Ab ELISA test for BTM confirmed the manufacturer's recommended cut-off of ODR ≥0.3 to denote positive and negative herds. This study suggests that AAR and BTM ELISA test can be used as herd-level tools to monitor liver fluke infection, so that appropriate interventions against infection can be implemented as necessary.

Digital dermatitis in Swedish dairy herds assessed by ELISA targeting Treponema phagedenis in bulk tank milk

BackgroundDigital dermatitis (DD) is a contagious hoof infection affecting cattle worldwide. The disease causes lameness and a reduction in animal welfare, which ultimately leads to major decreases in milk production in dairy cattle. The disease is most likely of polymicrobial origin with Treponema phagedenis and other Treponema spp. playing a key role; however, the etiology is not fully understood. Diagnosis of the disease is based on visual assessment of the feet by trained hoof-trimmers and veterinarians, as a more reliable diagnostic method is lacking. The aim of this study was to evaluate the use of an enzyme-linked immunosorbent assay (ELISA) on bulk tank milk samples testing for the presence of T. phagedenis antibodies as a proxy to assess herd prevalence of DD in Swedish dairy cattle herds.ResultsBulk tank milk samples were collected in 2013 from 612 dairy herds spread across Sweden. A nationwide DD apparent prevalence of 11.9% (8.1–14.4% CI95%) was found, with the highest proportion of test-positive herds in the South Swedish regions (31.3%; 19.9–42.4% CI95%).ConclusionsThis study reveals an underestimation of DD prevalence based on test results compared to hoof trimming data, highlighting the critical need for a reliable and accurate diagnostic method. Such a method is essential for disease monitoring and the development of effective control strategies. The novelty of ELISA-based diagnostic methods for DD, coupled with the disease’s polymicrobial origin, suggests an avenue for improvement. Developing an expanded ELISA, incorporating antigens from various bacterial species implicated in the disease, could enhance diagnostic accuracy. The significance of this study is underscored by the extensive analysis of a substantial sample size (612). Notably, this investigation stands as the largest assessment to date, evaluating the application of ELISA on bulk tank milk for DD diagnosis at the herd level.

Development of a decision support tool to compare diagnostic strategies for establishing the herd status for infectious diseases: An example with Salmonella Dublin infection in dairies

The diagnosis of infectious diseases at herd level can be challenging as different stakeholders can have conflicting priorities. The current study proposes a “proof of concept” of an approach that considers a reasonable number of criteria to rank plausible diagnostic strategies using multi-criteria decision analysis (MCDA) methods. The example of Salmonella Dublin diagnostic in Québec dairy herds is presented according to two epidemiological contexts: (i) in herds with no history of S. Dublin infection and absence of clinical signs, (ii) in herds with a previous history of infection, but absence of clinical signs at the moment of testing. Multiple multiparty exchanges were conducted to determine: 1) stakeholders’ groups; 2) the decision problem; 3) solutions to the problem (options) or diagnostic strategies to be ordered; 4) criteria and indicators; 5) criteria weights; 6) the construction of a performance matrix for each option; 7) the multi-criteria analyses using the visual preference ranking organization method for enrichment of evaluations approach; 8) the sensitivity analyses, and 9) the final decision. A total of nine people from four Québec’s organizations (the dairy producers provincial association along with the DHI company, the ministry of agriculture, the association of veterinary practitioners, and experts in epidemiology) composed the MCDA team. The decision problem was “What is the optimal diagnostic strategy for establishing the status of a dairy herd for S. Dublin infection when there are no clinical signs of infection?”. Fourteen diagnostic strategies composed of the three following parameters were considered: 1) biological samples (bulk tank milk or blood from 10 heifers aged over three months); 2) sampling frequencies (one to three samples collection visits); 3) case definitions to conclude to a positive status using imperfect milk- or blood-ELISA tests. The top-ranking diagnostic strategy was the same in the two contexts: testing the bulk tank milk and the blood samples, all samples collected during one visit and the herd being assigned a S. Dublin positive status if one sample is ELISA-positive. The final decision favored the top-ranking option for both contexts. This MCDA approach and its application to S. Dublin infection in dairy herds allowed a consensual, rational, and transparent ranking of feasible diagnostic strategies while taking into account the diagnostic tests accuracy, socio-economic, logistic, and perception considerations of the key actors in the dairy industry. This promising tool can be applied to other infectious diseases that lack a well-established diagnostic procedure to define a herd status.

Effects of extending dairy cow longevity by adjusted reproduction management decisions on partial net return and greenhouse gas emissions: A dynamic stochastic herd simulation study

Prolonging dairy cattle longevity is regarded as one of the options to contribute to more sustainable milk production. Because failure to conceive is one of the main reasons for culling, this study investigates how adjustments in reproduction management affect partial net return at herd level and greenhouse gas emissions per unit of milk, using a dynamic stochastic simulation model. The effects of reproduction decisions that extend cattle longevity on milk yield, calving interval and pregnancy rate were derived from actual performance of Dutch commercial dairy cows over multiple lactations. The model simulated lactations, calving, and health status events of individual cows for herds of 100 cows. Scenarios evaluated differed in the maximum number of consecutive AI attempts (4, 5, or 6 services), or the production threshold (20, 15, or 10 kg of milk/d) at which cows that failed to conceive are culled (reproductive culling). Annual partial net return was computed from revenues of sold milk, calves, and slaughtered cows, and the costs from feed consumption, rearing replacement heifers, AI services, and treatment for clinical mastitis and lameness. Greenhouse gas emissions were computed for feed production, enteric fermentation, and manure management, and were expressed as total CO2 equivalents (CO2-eq). Average age at culling increased with an increased maximum number of AI services. This increase was larger when going from a maximum of 4 to 5 AI attempts (108 d) than from a maximum of 5 to 6 attempts (47 d). Similarly, the average age at culling increased from 1,968 to 2,040 and 2,132 d when the threshold for reproductive culling decreased from 20, to 15 and 10 kg of milk/d, respectively. Average annual partial net return increased by 1.1% from €165,850 per 100 cows at a maximum of 4 AI to €167,670 per 100 cows at a maximum of 6 AI, and increased by 4.3% from €161,210 per 100 cows at a reproductive culling threshold of 10 kg/d to €168,190 per 100 cows at a threshold of 20 kg/d. Greenhouse gas emissions decreased by 1.2% from 0.926 to 0.915 kg CO2-eq per kg of fat- and protein-corrected milk (FPCM) with an increase in a maximum number of AI from 4 to 6 AI. Conversely, greenhouse gas emissions increased by 0.2% from 0.926 kg at a threshold of reproductive culling of 20 kg/d to 0.928 kg CO2-eq/kg FPCM at a threshold of 10 kg/d. Although lowering the threshold for reproductive culling has the potential to extend cattle longevity more than increasing the maximum number of AI services, only the increase in AI services benefits a farm's partial net return, while reducing greenhouse gas emissions.

Serological Evidence of Crimean-Congo Haemorrhagic Fever in Livestock in the Omaheke Region of Namibia.

This research examined the positivity ratio of Crimean-Congo haemorrhagic fever (CCHF) antibodies in cattle and sheep within Namibia's Omaheke region after a human disease outbreak in the same geographical area. A total of 200 samples (100 cattle and 100 sheep) were randomly collected from animals brought to two regional auction sites, and then tested using the ID Screen® CCHF Double Antigen Multi-Species Enzyme-Linked Immunosorbent Assay kit. Of the cattle samples, 36% tested positive, while 22% of the sheep samples were seropositive. The cattle had a significantly higher positivity ratio than sheep at the individual animal level (p = 0.0291). At the herd level, 62.5% of cattle herds and 45.5% of sheep flocks had at least one positive animal, but this difference was statistically insignificant (p = 0.2475). The fourteen cattle farms with at least one seropositive animal were dispersed across the Omaheke region. In contrast, the ten sheep farms with seropositive cases were predominantly situated in the southern half of the region. The study concluded that the CCHF is endemic in the Omaheke region and likely in most of Namibia, underscoring the importance of continued surveillance and preventive measures to mitigate the impact of CCHFV on animal health and potential spillover into human populations.

Factors associated with perceived Anaplasma marginale infection and clinical anaplasmosis cases on beef operations in California

Bovine anaplasmosis is a tick-borne disease caused by Anaplasma marginale in the United States. The objective of this study was to use a survey tool to generate information for beef operations in California on anaplasmosis prevention and control management, including to what extent management activities were informed by perceived herd-level exposure to A. marginale infection or occurrence of clinical anaplasmosis cases. We mailed 2,621 questionnaires with questions on Anaplasma status, herd demographics, anaplasmosis control and prevention measures, and environmental factors to beef ranchers in California in October 2020. Survey-weighted chi-square tests were used to compare management differences according to perceived Anaplasma infection status. Generalized estimating equations (GEEs) were used to analyze whether region of California, management practices, or environmental factors were associated with reported clinical cases of anaplasmosis in the previous five years. A total of 466 questionnaires describing 749 herds were obtained and used in this study. Use of management measures, including deliberate exposure of calves to ticks, vaccination for Anaplasma, infection control through antibiotics in feed, maintaining a completely closed herd, blood testing for Anaplasma on all herd additions, and taking no anaplasmosis control and prevention measures, were significantly different between herds with or without perceived A. marginale infection based on producers’ self-declared status. The overall perceived prevalence for Anaplasma infection and reported clinical cases of anaplasmosis at the herd level was 26.0 % (95 % CI: 24.3–27.7 %) and 17.1 % (95 % CI: 15.6–18.6 %) respectively, with the highest perceived infection and case numbers reported in the Central Coast region. In the GEE model, higher odds of reporting clinical cases of anaplasmosis in the previous five years were observed in cattle located in the Central Coast region, cattle within a large herd, cattle that are treated with tick/fly control, cattle in a completely closed herd, and cattle receiving Anaplasma vaccine. Anaplasma infection and bovine anaplasmosis status may be underestimated in beef herds in California based on previous study results. Changing needles between cattle after injections and conducting blood testing for Anaplasma on herd additions are important Anaplasma management measures that are infrequently implemented in beef herds in California. The results show a need for producer education to improve producers’ awareness of bovine anaplasmosis and implement proper measures for disease control and prevention.

Impact of herd mobility on brucellosis seroprevalence and spread risk resulting from cross-border transhumance.

Cross-border livestock mobility through transhumance is mainly practiced in West African countries for seasonal access to resources and market. Cross-border herds are involved in the dynamic of transboundary animal diseases among them brucellosis taken as model. Brucellosis is a zoonotic disease causing abortion. This study explores the seroprevalence of brucellosis according to mobility and infection spread between Mali and Côte d'Ivoire in the context of seasonal cross-border transhumance. From February to April 2021, a transversal serological survey of brucellosis was conducted on 521 cattle from 111 transhumant herds and 283 cattle from 59 sedentary herds, all from Mali. The global individual seroprevalence for Brucella spp. in transhumant and sedentary cattle from Mali was 8.2% (95% CI=6.0-10.5). At herd level, seroprevalence was 21.2% with a significant variation between transhumant (11.7%) and sedentary (39.0%) herds. For herds in transhumance, cattle seropositivity was associated with a previous infection suspected by herdsmen odds ratio (OR=4.4; 95% CI=1.1-18.1) and unknown abortion aetiology (OR=4.3; 95% CI=1.0-17.3). The departure region (coming from Sikasso) and previous brucellosis infection or unexplained abortion could be used to predict Brucella infection in transhumant herds with a probability of around 60%. The risk of brucellosis introduction in host regions was high despite the individual animal seroprevalence of 3.6% and a low sale rate in transhumant cattle. The findings suggest that testing transhumant during border control and survey of cattle markets and sales could improve risk control of the spread of disease at regional scale.

Progress in Paratuberculosis Control Programmes for Dairy Herds.

While paratuberculosis control has been studied for over a century, knowledge gaps still exist regarding the uptake and efficacy of control programmes. This narrative review aims to summarise studies on control programmes presented at the IDF ParaTB Fora in 2021 and 2022 and the International Colloquium on Paratuberculosis in 2022. Studies were grouped by topic as follows: successful control, field studies, education and extension, voluntary and compulsory control programmes, and surveillance. Various Map control programmes resulted in a decreasing animal and herd level Map prevalence. Long-term stakeholder commitment, stable funding, involvement of herd veterinarians and incentives for farmers to participate were shown to be pivotal for long-term success. Control measures focused on vertical and calf-to-calf transmission may improve Map control in infected herds. Easy-to-capture visualisation of surveillance test results to inform participants on the progress of Map control in their herds was developed. The probability of freedom from disease and estimated within-herd prevalence were identified as good candidates for categorisation of herds to support low-risk trade of cattle. Results of the surveillance schemes may inform genetic selection for resistance to Map infection. In conclusion, successful paratuberculosis control is feasible at both the herd and country level provided that crucial prerequisites are met.

A Combined Approach for the Characterization of Small Ruminant Lentivirus Strains Circulating in the Islands and Mainland of Greece.

Small ruminant lentiviruses are a group of viruses infecting goat and sheep worldwide. These viruses exhibit an extraordinary degree of genetic and antigenic variability that severely influence in vivo and in vitro features, as well as diagnostic test results. Small ruminant farming is the most important animal farming business in Greece, with a high impact on the Greek primary economy. Although SRLV infection and its impact on animal production are well established in the country, little is known about the circulating SRLV strains and their prevalence. The aim of this study was to characterize SRLVs circulating in Greece with a combined serological and molecular approach, using the bulk milk matrix collected from 60 farms in different municipalities. This study allowed us to estimate a seroprevalence of around 52% at the herd level. The B1, B2 and A3 subtypes and a novel A viral cluster were identified. Moreover, the amplicon sequencing method allowed us to identify more than one viral subtype in a sample. These results again confirm the high variability of these viruses and highlight the importance of the constant monitoring of viral evolution, in particular in antigens of diagnostic interest.

Epidemiological Study of Bovine Parainfluenza 3 Virus in Sheep: Seroprevalence, Risk Factors, and Distribution in Two Regions of Algeria

Background: Respiratory viral diseases, including the bovine parainfluenza 3 virus, cause significant economic losses in ruminants. There is no available data regarding the epidemiological situation of this virus in Algeria. Objectives: The present study aims to determine the seroprevalence and the associated risk factors of bovine parainfluenza 3 virus (BPI3V) in sheep in two different climatic regions of Algeria. Methods: A total of 108 serum samples were collected from sheep at different ages and tested for antibodies against BPI3V using an indirect enzyme-linked immunosorbent assay (ELISA). A real-time polymerase chain reaction (PCR) test was also performed on nasal swabs to detect the viral genome. Results: At the animal level, out of 108 sera tested, 82 (75.93%, 95% CI, 66.75%, 83.63%) showed antibodies against BPI3V. At the herd level, all 23 herds tested (100%) had at least one animal with BPI3V antibodies. Our results showed no association between the presence of BPI3V antibodies and the region (P=0.72). However, at the herd level, risk factors such as flock size and predisposing factors like climate change, feed deficit, postpartum stress, and dust were identified. At the animal level, a highly significant association was found between BPI3V seroprevalence and the age of the animals (P&lt;0.0001). Notably, the sheep group over 3 years was more susceptible than other age groups. Furthermore, a significant difference in BPI3V seroprevalence based on sex was observed (P&lt;0.003). All collected nasal swabs were negative for BPI3V genome detection using real-time PCR. Conclusion: This study is the first serological survey on BPI3V in Algeria, confirming its presence in sheep from two regions. The high serum prevalence of BPI3V observed in the study population highlights addressing this viral disease to mitigate economic losses in ruminants.

Economic impacts of constrained replacement heifer supply in dairy herds

CONTEXTIn recent years, environmental policies, especially in North-western European countries have put pressure on the total livestock on a dairy farm. On closed dairy farms this primarily has resulted in a reduction of the heifer rearing unit to maintain the production unit. The economic consequences of constrained replacement heifer supply on herd level have not been investigated. OBJECTIVEThe objective of this study is to study on herd level the economic impact of suboptimal replacement decisions due to a constrained replacement heifer supply. METHODSIn this study, we combine a single-cow MDP (Markov Decision Process) optimization model with dairy herd dynamics simulation of 10 years to account for the interdependency among dairy cows within the herd of 100 cows. Besides the base scenario of following optimal replacement policy, we simulated three input scenarios of constrained, excess, and variable replacement heifer supply. RESULTS AND CONCLUSIONIn the base scenario, optimal replacement policy resulted in a herd gross margin of €155,108, 11% voluntary replacement rate, 24% involuntary disposal rate annually for a herd of 100 cows. Constrained as well as excess heifer supply resulted in lower gross margins of €85,878 and €138,406 respectively, compared to the base scenario. Constrained heifer supply also resulted in 39% reduction of herd size, involuntary disposal of 17.5% and no voluntary replacements (0.1%) on average per year. Variable heifer supply scenario resulted in lower gross margins (€115,127), lower voluntary replacement rate (4%), highest involuntary disposal rate (28%) but did not result in reduction of herd size, compared to the base scenario.In conclusion, we developed a combination of cow level optimization with a herd level simulation to study the economic impacts of constrained replacement heifer supply. We found that severely constrained, excess, and variable heifer supply result in reduced herd average gross margin. SIGNIFICANCEOptimization replacement policy in case of limited heifer availability requires an inter-cow comparison to determine which cows need to be replaced first as this study shows. By demonstrating a simplified approach of combining individual cow optimization with herd dynamics simulation, we accounted for the inter-dependencies within herd. Such an approach can be instrumental in studying environmental impacts, longevity, and welfare of cows when heifer supply is constrained on a herd level.

Assessment of Welfare in Transhumance Yak Hybrids (Chauris) in the Lower Himalayan Region of Nepal

In order to develop a yak/chauri-specific welfare assessment protocol, we sent a set of 31 potential welfare measures to 120 Nepalese experts and asked them to identify the measures that they thought would be useful and propose additional useful measures. Eighty-three experts responded, with 13 measures being identified by &gt;50% of respondents as likely to be useful. These thirteen measures plus one new measure (hematology) were included in an assessment protocol that was tested in the second phase of this study in five chauri herds in two districts in northern Nepal. Animal-based evaluations along with sampling for mastitis, intestinal parasites, and hematology were undertaken during or just after morning milking. Resource- and record-based measures were assessed through structured interviews, with verifications on-site where possible. No chauris exhibited poor body conditions, skin injuries, significant locomotion issues, or significant subclinical mastitis. Fecal testing suggested a high prevalence of intestinal parasites at the herd level, while blood testing suggested no evidence of hematological abnormalities. However, for both results, we need more data to use these effectively as measures of welfare. The resource-based assessment revealed significant challenges across all resources, and veterinary services were reported as being inadequate. A high estimated annual mortality rate (10–21%) needs further investigation. This protocol provided a useful start towards developing a welfare assessment protocol for yak/chauri and identified issues that need addressing to optimize chauri welfare.

The Most Important Metabolic Diseases in Dairy Cattle during the Transition Period.

This review paper provides an in-depth analysis of three critical metabolic diseases affecting dairy cattle such as subacute ruminal acidosis (SARA), ketosis, and hypocalcemia. SARA represents a disorder of ruminal fermentation that is characterized by extended periods of depressed ruminal pH below 5.5-5.6. In the long term, dairy herds experiencing SARA usually exhibit secondary signs of the disease, such as episodes of laminitis, weight loss and poor body condition despite adequate energy intake, and unexplained abscesses usually 3-6 months after an episode of SARA. Depressed milk-fat content is commonly used as a diagnostic tool for SARA. A normal milk-fat test in Holstein dairy cows is >4%, so a milk-fat test of <3% can indicate SARA. However, bulk tank testing of milk fat is inappropriate to diagnose SARA at the herd level, so when >4 cows out of 12 and <60 days in milk are suspected to have SARA it can be considered that the herd has a problem. The rapid or abrupt introduction of fresh cows to high-concentrate diets is the most common cause of SARA. Changes in ruminal bacterial populations when exposed to higher concentrate rations require at least about 3 weeks, and it is recommended that concentrate levels increase by no more than 400 g/day during this period to avoid SARA. Ketosis, a prevalent metabolic disorder in dairy cattle, is scrutinized with a focus on its etiological factors and the physiological changes leading to elevated ketone bodies. In total mix ration-fed herds, an increased risk of mastitis and reduced fertility are usually the first clinical signs of ketosis. All dairy cows in early lactation are at risk of ketosis, with most cases occurring in the first 2-4 weeks of lactation. Cows with a body condition score ≥3.75 on a 5-point scale at calving are at a greater risk of ketosis than those with lower body condition scores. The determination of serum or whole blood acetone, acetoacetate, beta-hydroxybutyrate (BHB) concentration, non-esterified fatty acids (NEFA), and liver biopsies is considered the best way to detect and monitor subclinical ketosis, while urine or milk cowside tests can also be used in on-farm monitoring programs. Concentrations >1.0 mmol/L or 1.4 mmol/L blood or serum BHB are considered diagnostic of subclinical ketosis. The standard threshold used for blood is 1.2 mmol/L, which corresponds to thresholds of 100 mcmol/L for milk and 15 mg/dL for urine. Oral administration of propylene glycol (250-400 g, every 24 h for 3-5 days) is the standard and most efficacious treatment, as well as additional therapy with bolus glucose treatment. Hypocalcemia is a disease of adult dairy cows in which acute hypocalcemia causes acute to peracute, afebrile, flaccid paralysis that occurs most commonly at or soon after parturition. Dairy cows are at considerable risk for hypocalcemia at the onset of lactation, when daily calcium excretion suddenly increases from about 10 g to 30 g per day. Cows with hypocalcemia have a more profound decrease in blood calcium concentration-typically below 5.5 mg/dL. The prevention of parturient paresis has been historically approached by feeding cows low-calcium diets during the dry period. Negative calcium balance triggers calcium mobilization before calving and better equips the cow to respond to the massive calcium needs at the onset of lactation. Calcium intake must be limited to <20 g per day for calcium restriction to be effective. The most practical and proven method for monitoring hypocalcemia is by feeding cows an acidogenic diet for ~3 weeks before calving. Throughout the review, emphasis is placed on the importance of early diagnosis and proactive management strategies to mitigate the impact of these metabolic diseases on dairy cattle health and productivity. The comprehensive nature of this paper aims to serve as a valuable resource for veterinarians, researchers, and dairy farmers seeking a deeper understanding of these prevalent metabolic disorders in dairy cattle.