Hepatitis C Virus (HCV) glycoproteins El and E2 are produced by proteolytic cleavage of the HCV polyprotein (RICE 1996). Cotranslational cleavages at the C/El, E1/E2 and NS2/NS3 sites produce El and a short-lived precursor of E2, E2-NS2. This precursor is cleaved to produce E2, E2-p7 and NS2 (GRAKOUI et al. 1993; LIN et al. 1994; MIZUSHIMA et al. 1994; SELBY et al. 1994). For some HCV strains, processing at the E2/p7 site is inefficient, leading to the production of a reasonably stable E2-p7 species (DUBUISSON et al. 1994; LIN et al. 1994; MIZUSHIMA et al. 1994; SELBY et al. 1994). HCV glycoproteins El and E2 are heavily modified by N-linked glycosylation and are believed to be type I transmembrane glycoproteins with a NH2-terminal ectodomain and a COOH-terminal hydrophobic anchor. For E2, COOH-terminal deletions removing its hydrophobic region result in secretion of the ectodomain (HUSSY et al. 1996; INUDOH et al. 1996; LESNIEWSKI et al. 1995; MATSUURA et al. 1994; MICHALAK et al. 1997; NISHIHARA et al. 1993; SELBY et al. 1994; SPAETE et al. 1992). This is in accordance with other data proposing that the hydrophobic anchor domain begins at amino acid 718 (position on the polyprotein; MIZUSHIMA et al. 1994). The situation appears to be more confusing for E1, since a truncated form ending at amino acid 340 is secreted only if it contains an internal deletion between amino acids 262 and 290, suggesting that a second membrane anchor might exist (MATSUURA et al. 1994).
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