Specific Habitat Research Articles

Combining biotelemetry and genetics provides complementary insights relevant to the management and conservation of a freshwater predator (Esox lucius) living in brackish lagoons

To inform the management of wild fish populations, it is equally important to understand both the ecological connectivity of habitat patches, apparent at annual and seasonal scales, and the genetic connectivity, emerging at evolutionary scales across generations. Ecological connectivity indicates the potential for rapid recolonization upon local depletion, while genetic connectivity informs about the conservation needs related to the evolution of subpopulations and ecotypes in metapopulations. We combined acoustic biotelemetry and pooled-genome sequencing to study a northern pike (Esox lucius) population as a model of a freshwater piscivore that inhabits a network of shallow brackish lagoons in the southern Baltic Sea. We found limited ecological connectivity among genetically similar subpopulations of pike, suggesting a metapopulation structure characterized by discrete local subpopulations with infrequent migrations between them. Connectivity of different lagoons increased during spawning, suggesting directed spawning migrations to either freshwater rivers or low salinity patches in connected lake-like bays. Spawning site fidelity to either brackish or freshwater spawning sites was observed, further contributing to the reproductive isolation of certain subpopulations. The genetic population structure aligned with salinity gradients and geographical distance and was significant between pairs of rivers draining into the lagoon network, but it was unrelated to ecological connectivity. The results collectively suggest that local subpopulations may not rapidly replenish upon local depletion and that even weak connectivity among subpopulations was sufficient to maintain genetic homogeneity across lagoons with similar salinity levels. Effective management and conservation of species forming metapopulations, such as the coastal northern pike studied here, necessitate localized approaches that adapt fishing mortality to local abundance and promote access to specific habitats, especiallyrivers, during spawning to conserve the entire genetic biodiversity and foster resilience of the metapopulation.

Species-specific erosion of genetic diversity in grassland butterflies depends on landscape land cover

Changes in land cover, particularly agricultural intensification, are a primary cause of pollinator decline. Decline and isolation can reduce genetic diversity, reducing adaptive potential and unmasking genetic load. Maintenance of functional connectivity in changing landscapes is necessary to ensure persistence, but how land cover impacts genetic diversity and functional connectivity in butterflies remains poorly understood. We assess to which extent land cover functionally isolates grassland butterfly populations and what consequences isolation has for genetic diversity using whole genome and land cover data. We assess species-specific patterns across three butterfly species that vary in habitat specialization and mobility - Polyommatus icarus, Plebejus argus and Cyaniris semiargus - using samples from 6 to 11 populations across a ~25,000 km2 area in southern Sweden. We find that while generalist Po. icarus is nearly panmictic and heathland specialist Pl. argus maintains modest functional connectivity, grassland specialist C. semiargus exists in largely isolated populations. Genetic diversity in all species is positively related to grassland extent in the surrounding landscape. Arable and forest extent are positively and negatively related to genetic diversity in Po. icarus, while the inverse is true in C. semiargus. Lower functional connectivity in C. semiargus is coupled with higher rates of inbreeding, suggesting more urgent need of conservation action aimed at restoring functional connectivity in this species, illustrating how genetic data can reveal threats that may go unnoticed with abundance data alone. We conclude that specialist butterfly genetic diversity relies upon preservation of well-connected semi-natural grasslands to maintain functional connectivity at longer distances.

Estimating Biogeochemical Rates Using a Computationally Efficient Lagrangian Approach

Nutrient concentrations in many estuaries have increased over the past century due to increases in wastewater discharge and increased agricultural intensity, contributing to multiple environmental problems. Numerous biogeochemical and physical processes in estuaries influence nutrient concentrations during transport, resulting in complex spatial and temporal variability and challenges identifying predominant processes and their rates. Mechanistic models which require these rates to quantify biogeochemical processes become complex and difficult to calibrate as the number of processes and parameters grows, owing to the high dimensionality of the parameter space and the computational cost of simultaneously modeling the transport and transformations of constituents. We developed a modeling approach that decouples transport from transformations, enabling fast, data-driven exploration of the parameter space. The approach extracted information including water age, cumulative exposure to specific habitats, and mean water depth exposure from a hydrodynamic model. Using this information, a biogeochemical model was implemented to predict ammonium and nitrate concentrations in a Lagrangian frame. The model performed each simulation in milliseconds on a laptop computer, allowing the fitting of rate parameters for key transformations by optimization. The optimization used fixed station nitrate observations and the model was then validated against high-resolution mapping observations of ammonium and nitrate. The results suggest that the observed spatial and temporal variation can be largely represented with five transformation processes and their associated rates. Dissolved inorganic nitrogen (DIN) losses occurred only in shallow vegetated areas in the model, highlighting that biogeochemical processes in these areas should be included in DIN models.

Pleistocene and modern distribution of the subterranean rodent Myospalax myospalax (Rodentia, Myospalacidae) in response to environmental factors

The question of the modern and past distribution of Siberian zokor Myospalax myospalax (Laxmann, 1773) continues to be an unresolved puzzle. This Western Siberian endemic species belongs to the family Myospalacidae, a group of subterranean rodents. The distribution of M. myospalax went through dramatic changes due to mass hunting in the first half of the 20th century and later development of agriculture. Because of this, data from various studies executed in different years do not always match, making it difficult to determine the natural limiting factors in the distribution of Siberian zokors. In turn, paleontological data from different regions are fragmentary and have not been summarized in a single study. We aimed to review the past and modern distribution of M. myospalax and examine its relationship with environmental factors such as climate and soils distribution. We hypothesized that this species may be a good indicator of past environmental conditions because of its special habitat characteristics. We gathered and revised published data to reconstruct the distribution before the anthropogenic influence of the 20th century and during the Pleistocene and Holocene epochs. The modern preanthropogenic range was compared with the distribution of soil complexes and provinces. We also examined M. myospalax molars from Late Pleistocene – Holocene localities and compared them with the modern population. The Siberian zokor distribution data provided herein will be useful for researchers from other regions who use fragmentary or doubtful data on the topic. We also identified climatic and soil parameters of M. myospalax habitat. These parameters can be used to reconstruct past environmental conditions from paleontological findings of the Siberian zokor.

Contrasting diversity patterns and drivers of aquatic macroinvertebrates in floodplain and non-floodplain wetlands

Understanding diversity patterns and underlying drivers is one of the central topics in the fields of biogeography and community ecology. Aquatic macroinvertebrates are widely distributed in various wetlands and play vital ecological roles. Previous studies mainly have focused on macroinvertebrate diversity in a single type of wetland. Our understanding of the differences in diversity patterns and underlying drivers between different wetland types remains limited. Here, we compared diversity patterns and community assembly of floodplain wetlands (FWs) and non-floodplain wetlands (NWs) in the Sanjiang Plain, Northeast China. We found that the taxonomic richness and abundance were higher in NWs than those in FWs. Nineteen taxa were identified as habitat specialists in the NWs, whereas only four taxa were designated as habitat specialists in the FWs. In addition, the FW and NW assemblages exhibited contrasting compositions. Spatial and environmental variables explained the largest variations in the macroinvertebrate assemblages of NWs and FWs, respectively. Normalised stochasticity ratios and Sloan neutral models confirmed that the macroinvertebrate community assembly of both wetland types was driven largely by stochastic processes. Stochastic processes were more prominent in shaping macroinvertebrate communities of FWs, whereas a stronger dispersal limitation was detected in NWs. Our results revealed contrasting diversity patterns and assembly mechanisms of macroinvertebrate communities in FWs and NWs. We underscore the importance of flood disturbance in shaping wetland ecosystems in the Sanjiang Plain and highlight that conservation and restoration actions cover different types of wetland habitats.

Fauna and Ecology of Macromycetes (Basidiomycota) in the Arctic Tree and Shrub Ecosystems of Central Siberia.

The research was aimed at studying the taxonomic diversity, habitat specialization, and trophic characteristics of mycobiota, including Basidiomycota, in the northern ecosystems of the Krasnoyarsk Krai (Central Siberia) near Norilsk. Larch forests and woodlands in the Siberian permafrost zone are distinctive and Basidiomycota, as a component of these ecosystems, plays an essential role in their functioning. Currently, there is a paucity of information about this group in Arctic ecosystems, both in terms of floristic and ecological aspects. Seventy species of macromycetes belonging to different trophic groups were discovered and identified. Only 15% of species occur regularly, while most species are found rarely or only once. The identified species belong to 44 genera, 25 families, and 8 orders, which are included in the class Agaricomycetes. The leading families in terms of the number of species are Russulaceae, Polyporaceae, Tricholomataceae, Suillaceae, Strophariaceae, and Cortinariaceae. Mycorrhizal fungi and wood decay fungi dominate the structure of mycobiota of the study area (the total share is 71%). The rest of the species (29%) are fungal decomposers inhabiting plant litter, the forest floor, and humus. The largest number of species occur in forest ecosystems, which are dominated by mycorrhizal and wood decay fungi (up to 70%), which are trophically associated with woody plants and debris. The fungal decomposers inhabiting plant litter, the forest floor, and humus dominate (about 80%) in the species composition of tundra, where, in the absence of woody substrate, wood decay fungi have not been found at all. The species richness of tree and shrub Arctic ecosystems is low, yet the taxonomical and ecological structure of Basidiomycota is similar to that observed in taiga and temperate forests. These data permit a more comprehensive description of the biodiversity of the Arctic and may prove useful in studying biological processes in these ecosystems.

Oxygen and sulfur stable isotope ratios of Late Devonian vertebrates trace the relative salinity of their aquatic environments

Late Devonian aquatic environments hosted the fin-to-limb transition in vertebrates. Upper Devonian (ca. 365−360 Ma) strata in Pennsylvania, USA, preserve a diversity of fishes and tetrapods in coastal marine to fluvial depositional environments, making this region ideal for investigating the ecology and evolution of Late Devonian vertebrates. A key unresolved issue has been reconstructing the specific aquatic habitats that hosted various vertebrates during this period. Specifically, the salinity of environments spanning fresh to shallow marine water is difficult to discern from sedimentological and paleontological analyses alone. Here, we analyze rare earth elements and yttrium (REY) as well as stable oxygen and sulfur isotope compositions (δ18O, δ34S) in fossil vertebrate bioapatite from late Famennian (ca. 362−360 Ma) strata of the Catskill and Lock Haven formations in the Appalachian Basin, USA, to determine the relative salinity of their aquatic environments. These results confirm the ecological euryhalinity of several taxa (Bothriolepis sp., tristichopterids, and Holoptychius sp.). Our results are the first demonstrating that some early tetrapod species occupied unequivocally freshwater habitats by late Famennian time (ca. 362−360 Ma). Our study shows that integrating sedimentological and paleontological data with combined oxygen and sulfur isotope analysis allows precise tracing of the relative salinity of vertebrate habitats deep in the past.

Rubber plantations are impermeable to an avian understory specialist in Sri Lanka

BackgroundUnderstanding how landscape characteristics affect animal movement is essential for conservation in human-dominated habitats. A fundamental question is how monoculture agroforests, including rubber and tea plantations, affect wildlife and its movement. Experimental translocations represent an important technique to assess animals’ habitat selection while moving through agricultural matrices, especially when complemented with observations of birds’ natural movements, and with “control” translocations, in which birds are moved within their natural habitat such as forest. Yet, experimental translocations have been little used for birds outside the Western Hemisphere.MethodsWe conducted experimental translocations and home-range measurements on an understory forest specialist, Brown-capped Babbler (BCBA, Pellorneum fuscocapillus), and a forest generalist, Tickell’s Blue Flycatcher (TBFL, Cyornis tickelliae). These species were studied in three rubber plantations, which also included some open areas mostly planted with tea, and in three forest reserves of Sri Lanka.ResultsFour of the five BCBAs translocated within disturbed habitats (rubber plantations) could not return to their capture locations. However, all four individuals within undisturbed habitats (forest reserves) successfully returned to their point of origin within 10.5 daytime hours. In contrast, all TBFLs returned to their capture locations in both disturbed (n = 7) and undisturbed habitats (n = 3) within 11.3 daytime hours. A Cox-proportional survival model demonstrated that the percentage of rubber cover decreased return time, similar to the effect of open-area cover. The home range surveys (n = 13 for BCBA, n = 10 for TBFL) revealed that very little of the birds’ natural home-ranges was covered by rubber (0.2% for BCBA, 13.1% for TBFL at 50% Kernel Density Estimates KDE). Home range size for BCBA was approximately half the size in disturbed habitats compared to undisturbed ones, although there was no significant difference between habitats for TBFL.ConclusionsWe conclude that rubber plantations can be impermeable to understory habitat specialist birds, and even generalist species may avoid them long-term. Our findings highlight the potential utility of strips of native vegetation, particularly those featuring understory layers, as corridors to facilitate the movement of forest specialists in landscapes dominated by rubber plantations and other types of disturbed habitats.

Microhabitat diversity – A crucial factor shaping macrofungal communities and morphological trait expression in dead wood

The majority of studies exploring the ecology of saprotrophic fungi have worked with individual logs as homogenous sampling units, neglecting the presence of microhabitats and inner complexity. Based on close to 7000 sporocarp records of more than 450 fungal taxa from 134 decaying beech logs we investigated microhabitat preferences in macrofungi and linked these to sporocarp traits. The respective microhabitats were defined by the local wood decay stage, vertical position on the fallen log and special habitat features (hollows, fracture surfaces, woody material fallen from the log). We found microhabitat associations to be non-random in relation to fungal community composition and sporocarp morphology, indicating an evolutionary link between dead wood niche and sporocarp morphology. While log-level fungal species richness peaked at intermediate decay stages, taxa with significant indicator values were skewed towards early and late decay stages, when defined at microhabitat decay level. This suggests that the commonly found peak in fungal species richness on dead logs in intermediate decay stages expresses a peak in niche diversity rather than a peak in taxa decay stage preferences.

Distinct strategies of the habitat generalists and specialists in the Arctic sediments: Assembly processes, co-occurrence patterns, and environmental implications

Microorganisms could be classified as habitat generalists and specialists according to their niche breadth, uncovering their survival strategy is a crucial topic in ecology. Here, differences in environmental adaptation, community assemblies, co-occurrence patterns, and ecological functions between generalists and specialists were explored in the Arctic marine sediments. Compared to specialists, generalists showed lower alpha diversity but stronger environmental adaption, and dispersal limitation contributed more to the community assembly of specialists (74 %) than generalists (46 %). Furthermore, the neutral theory model demonstrated that generalists (m = 0.20) had a higher immigration rate than specialists (m = 0.02), but specialists exhibited more complex co-occurrence patterns than generalists. Our results also found that generalists may play more important roles in C, N, S metabolism but are weaker in carbon fixation and xenobiotic biodegradation and metabolism. This study would broaden our understanding of bacterial generalists' and specialists' survival strategies, and further reveal their ecological functions in marine sediments.

Physical structure of the environment contributes to the development of diversity of microalgal assemblages

Aquatic macrophytes form a three dimensional complex structure in the littoral zones of lakes, with many physical, chemical and biological gradients and interactions. This special habitat harbours a unique microalgal assemblage called metaphyton, that differs both from the phytoplankton of the pelagial and from the benthic assemblages whose elements are tightly attached to the substrates. Since metaphytic assemblages significantly contribute to the diversity of lakes’ phytoplankton, it is crucial to understand and disentangle those mechanisms that ensure their development. Therefore, we focused on the question of how a single solid physical structure contribute to maintaining metaphytic assemblages. Using a laboratory experiment we studied the floristic and functional differences of microalgal assemblages in microcosms that simulated the conditions that an open water, a complex natural macrophyte stand (Utricularia vulgaris L.), or an artificial substrate (cotton wool) provide for them. We inoculated the systems with a species rich (> 326 species) microalgal assemblage collected from a eutrophic oxbow lake, and studied the diversity, trait and functional group composition of the assemblages in a 24 day long experimental period. We found that both natural and artificial substrates ensured higher species richness than the open water environment. Functional richness in the open water environment was lower than in the aquaria containing natural macrophyte stand but higher than in which cotton wool was placed. This means that the artificial physical structure enhanced functional redundancy of the resident functional groups. Elongation measures of microalgal assemblages showed the highest variation in the microcosms that simulated the open water environment. Our results suggest that assembly of metaphytic algal communities is not a random process, instead a deterministic one driven by the niche characteristics of the complex three dimensional structure created by the stands of aquatic macrophytes.

Мохоподібні парку-пам’ятки садово-паркового мистецтва місцевого значення «Снопківський» (м. Львів)

The species diversity and substratum preferencies of Bryophytes in the territory of the local park-monument park “Snopkivsky” in the urban ecosystem of Lviv are given in the article. The bryoflora of the Snopkivsky Park includes 61 species of bryophytes from the divisions Marchantiophyta and Bryophyta. The high position of the families Brachytheciaceae, Orthotricaceae, Pottiaceae, Bryaceae in the floristic spectrum reflects the specificity of the park’s local conditions. The percentage of these families in the floristic spectrum is 45.9 % of the total species richness. This distribution is characteristic of aridic natural zones, which indicates the dry condition of the urban microclimate. At the same time, a good representation of the boreal and nemoral forest families such as Mniaceae, Amblystegiaceae, Hypnaceae (21.3 % of the total species richness) reflects the natural features of the territory (the zone of broad-leaved forests), which spontaneously reproduced on part of the Park territory or were created artificially in ornamental gardening. In this part of the Park with spontaneous silvatisation the largest number of bryophyte species is concentrated and the moss cover is the most abundant. Poor representation of Marchantiophytes indicates a significant degree of anthropization of the studied urban ecosystem. There is an increase in the number of anthropogenic ecotopes in the Park, which is reflected in a significant upgrowth in the fraction of epilithic bryophyte species. Ravines and abandoned quarries have the greatest conservation value for mosses on the Park territory. Some anthropophobic species as components of epigeic, epiphytic and epixylic substrates groups, which are not characteristic of intensively urbanized areas, are occur here. No rare bryophyte species were found within the park. However, floating liverwort Riccia fluitans, which is not typical for urban areas in general, was found in the Zelene Oko lake. Calcareous tufa deposited in the bed of hard-water streams at the headwaters of the Snopkivsky stream is a specific habitat for bryophytes. Indicators for hard-water springs with tufa formation of European lowland arias bryophytes species (Apopellia endiviifolia, Cratoneuron filicinum and Platyhypnidium riparoides) were found here. Amphibious (primarily calciphilic tufa-forming) and free-floating bryophyte species are equally not typical for urbanized ecosystems and occur here only sporadically: this fact underlines the conservation value of the researched park for the pre­servation of bryophytes microhabitats within the city boundaries. The conservation of silvatic areas, both spontaneous and artificial, is an important condition for the effective functioning of the park as a semi-natural ecosystem. The diversity of bryophytes, their species composition and cover abundance are indicative of the integrity of urban ecosystems on the territory of the park “Snopkivsky”.

Climate-induced shift of deep-sea benthic foraminifera at the onset of the mid-Brunhes dissolution interval in the northeast tropical Indian Ocean

The mid-Brunhes dissolution interval (MBDI; Marine Isotope Stage (MIS) 13 to 7; ~ 533–191 ka) is characterized by various paleoclimatic/paleoceanographic events in the world. We investigated fossil deep-sea benthic foraminifera and sediment geochemistry at the onset of the MBDI (~ 670–440 ka) using Ocean Drilling Program (ODP) Site 758 and core GPC03 in the northeast tropical Indian Ocean (TIO), primarily focusing on the relationship between the paleoceanographic conditions of the surface and deep oceans. Based on multi-dimensional scaling, MDS axis 1 is related to the specific depth habitats of benthic foraminiferal fauna, possibly at the trophic level. In MDS axis 1, the difference between the two core sites was smaller from ~ 610 to 560 ka, whereas it was larger from ~ 560 to 480 ka. In contrast, MDS axis 2 may be related to the low food supply at episodic food pulses/relatively stable and low food fluxes. MDS axis 2 showed generally similar stratigraphic variations between the two cores during ~ 610–560 ka, but was different during ~ 560–480 ka. The proportion of lithogenic matter to biogenic carbonate was relatively low from ~ 610 to 530 ka under the highstand when sediment transport to the study area was reduced. Thus, both the depth gradient in the distribution of benthic foraminiferal fauna and the lithogenic supply between the two cores changed coincidently across the MIS 15/14 (~ 570–540 ka) transition. Such paleoceanographic conditions across MIS 15/14 transition were attributed to the long-term weakening of the wind-driven mixing of surface waters, which might have been caused by the weakening of the Indian summer monsoon in the northeast TIO, possibly with the northward displacement of the InterTropical Convergence Zone in the Northern Hemisphere. In particular, the depth gradient in the distributions of benthic foraminiferal faunas represents the paleoceanographic linkage between the surface and deep oceans through particulate organic matter ballasting by calcareous plankton skeletons in addition to lithogenic matter, which changed transiently and significantly across MIS 15/14 transition close to the onset of the MBDI.

Sexual dimorphism and species divergence between a habitat generalist and a habitat specialist

AbstractSexual dimorphism, the phenotypic differences between males and females within a species, is widespread in the animal kingdom. This study investigates the extent of sexual dimorphism and species divergence in external morphology in two closely related freshwater fish species, Devario malabaricus and D. micronema, in Sri Lanka. Devario malabaricus, a habitat generalist, inhabits a wide range of aquatic environments, while D. micronema, a habitat specialist, resides in shaded rainforest streams. The study reveals size differences between the two species: D. malabaricus is consistently larger than D. micronema. However, there are no size differences between the sexes within each species. Several additional morphological traits, such as head length, interorbital width, predorsal length and postdorsal length display divergence between the species as well as between the sexes within each species; these patterns are also consistent across populations. The sexually dimorphic traits are similar between the two species despite their distinct ecological habitats. However, Devario malabaricus exhibit stronger sexual dimorphism compared to D. micronema, supporting the prediction of a positive relationship between the extent of sexual dimorphism and ecological generalism. The study highlights the importance of considering sexual dimorphism in morphometric comparisons in taxonomic studies of Devario and suggests that divergent selection between the sexes contributes to morphological variation in this group.

Quantifying the effects of landscape and habitat characteristics on structuring bird assemblages in urban habitat patches

Understanding the determinants of biodiversity in fragmented habitats is fundamental for informing sustainable landscape development, especially in urban landscapes that substantially fragment natural habitat. However, the relative roles of landscape and habitat characteristics, as emphasized by two competing frameworks (the island biogeography theory and the habitat diversity hypothesis), in structuring species assemblages in fragmented habitats have not been fully explored. This study investigated bird assemblages at 26 habitat patches (ranging in size from 0.3 to 290.4 ha) in an urban landscape, southwest China, among which habitat type composition and woody plant species composition varied significantly. Through 14 bird surveys conducted over six breeding seasons from 2017 to 2022, we recorded 70 breeding bird species (excluding birds recorded only once and fly-overs, such as raptors, swallows and swifts), with an average of 26 ± 10 (SD) species per patch. We found that patch area had significant direct and indirect effects on bird richness, with the indirect effects mediated by habitat richness (i.e., the number of habitat types). Isolation (measured as the distance to the nearest patch), perimeter to area ratio (PAR), and woody plant richness did not significantly predict variation in bird richness. Furthermore, none of these factors significantly sorted bird species based on their functional traits. However, the overall makeup of bird assemblages was significantly associated with the specific habitat types and woody plant species present in the patches. The results suggest that neither the island biogeography theory nor the habitat diversity hypothesis can fully explain the impacts of habitat fragmentation on bird richness in our study system, with their roles primarily being linked to patch area. The findings that habitat and plant compositions were the major drivers of variation in bird assemblage composition offer valuable insights into urban planning and green initiatives. Conservation efforts should focus not only on preserving large areas, but also on preventing urban monocultures by promoting diverse habitats within those areas, contributing to the persistence of meta-communities.

An evolutionary case for plant rarity: Eucalyptus as a model system

AbstractSpecies rarity is a common phenomenon across global ecosystems that is becoming increasingly more common under climate change. Although species rarity is often considered to be a stochastic response to environmental and ecological constraints, we examined the hypothesis that plant rarity is a consequence of natural selection acting on performance traits that affect a species range size, habitat specificity, and population aggregation; three primary descriptors of rarity. Using a common garden of 25 species of Tasmanian Eucalyptus, we find that the rarest species have 70% lower biomass than common species. Although rare species demonstrate lower biomass, rare species allocated proportionally more biomass aboveground than common species. There is also a negative phylogenetic autocorrelation underlying the biomass of rare and common species, indicating that traits associated with rarity have diverged within subgenera as a result of environmental factors to reach different associated optima. In support of our hypothesis, we found significant positive relationships between species biomass, range size and habitat specificity, but not population aggregation. These results demonstrate repeated convergent evolution of the trait‐based determinants of rarity across the phylogeny in Tasmanian eucalypts. Furthermore, the phylogenetically driven patterns in biomass and biomass allocation seen in rare species may be representative of a larger plant strategy, not yet considered, but offering a mechanism as to how rare species continue to persist despite inherent constraints of small, specialized ranges and populations. These results suggest that if rarity can evolve and is related to plant traits such as biomass, rather than a random outcome of environmental constraints, we may need to revise conservation efforts in these and other rare species to reconsider the abiotic and biotic factors that underlie the distributions of rare plant species.

Woody plant encroachment drives population declines in 20% of common open ecosystem bird species.

Grassy ecosystems cover more than 40% of the world's terrestrial surface, supporting crucial ecosystem services and unique biodiversity. These ecosystems have experienced major losses from conversion to agriculture with the remaining fragments threatened by global change. Woody plant encroachment, the increase in woody cover threatening grassy ecosystems, is a major global change symptom, shifting the composition, structure, and function of plant communities with concomitant effects on all biodiversity. To identify generalisable impacts of encroachment on biodiversity, we urgently need broad-scale studies on how species respond to woody cover change. Here, we make use of bird atlas, woody cover change data (between 2007 and 2016) and species traits, to assess: (1) population trends and woody cover responses using dynamic occupancy models; (2) how outcomes relate to habitat, diet and nesting traits; and (3) predictions of future occupancy trends, for 191 abundant, southern African bird species. We found that: (1) 63% (121) of species showed a decline in occupancy, with 18% (34) of species' declines correlated with increasing woody cover (i.e. losers). Only 2% (4) of species showed increasing population trends linked with increased woody cover (i.e. winners); (2) Open habitat specialist, invertivorous, ground nesting birds were the most frequent losers, however, we found no definitive evidence that the selected traits could predict outcomes; and (3) We predict open habitat loser species will take on average 52 years to experience 50% population declines with current rates of encroachment. Our results bring attention to concerning region-wide declining bird population trends and highlight woody plant encroachment as an important driver of bird population dynamics. Importantly, these findings should encourage improved management and restoration of our remaining grassy ecosystems. Furthermore, our findings show the importance of lands beyond protected areas for biodiversity, and the urgent need to mitigate the impacts of woody plant encroachment on bird biodiversity.

Dispersal limitation and environmental filtering effects: The taxonomic and functional beta diversity of ground beetles along the altitudinal gradient in Chinese warm-temperature forests.

Beta diversity patterns along environmental gradients and underlying mechanisms constitute key research inquiries in biogeography. However, ecological processes often also influence the functional traits of biological communities, making the assessment of functional β-diversity crucial. Ground beetles (Coleoptera: Carabidae) are one of the most species-rich groups in the insect community, displaying strong habitat specificity and morphological differences. In this study, we explored the patterns of taxonomic and functional beta diversity in ground beetle communities along the altitudinal gradient of warm-temperature forests. By partitioning beta diversity into turnover and nestedness components, we evaluated their relationship with spatial distance. Our findings indicate a decline in species and functional trait similarity with increasing elevation and geographic distance. Further analysis attributed both types of beta diversity in carabids to a combination of dispersal limitation and environmental filtering, with elevation and geographic distance emerging as significant factors. Interestingly, forest-type variations were found to have no impact on the beta diversity of these communities. Our study reveals the impact of environmental filtering and dispersal limitation on both taxonomic and functional beta-diversity, shedding light on carabid community assembly in localized warm-temperature forest areas in eastern China.

Assessment of rarity and ecological preferences of the non-marine ostracods (Crustacea) in Çanakkale Province (Türkiye)

Rarity as a multidimensional concept has not been discussed for the ostracods along with the effects of physicochemical factors and sedimentation rates of waters on their distribution. We randomly sampled 91 aquatic sites including eight habitat types in the Çanakkale Province to study ostracod species rarity, commonness, and ecological preferences, and to test the relationships between the rarity index (average of geographic range, habitat specificity, and population size indices) and environmental factors. A total of 44 ostracod taxa (25 living) were reported from 75 sites. Among the species, Candonocypris caledonica was recorded for the first time in Türkiye. Sixty percent of 25 living species exhibited cosmopolitan characteristics, making significant contributions to the diversity of ostracods. The well-known cosmopolitan species, Heterocypris salina (rr = 0.268), Cypridopsis vidua (rr = 0.289), Limnocythere inopinata (rr = 0.330), Ilyocypris bradyi (rr = 0.370), and Psychrodromus olivaceus (rr = 0.390), were identified as common species based on the rarity index (rr) values. Of the environmental variables, only sediment grain sizes (×2000, ×500, and ×63 μm) were found to be effective on the distribution of ostracod species. The Shannon index exhibited a positively significant association with ×2000, while the population size index displayed a linear relationship with ×63 μm grain size, indicating a small population size and rarity. Associations among index values, sediment grain size, and water quality variables showed that comprehensive studies on ostracods, analyzing both water and sediment, can provide a clearer and more precise information for evaluating the rarity and ecological preferences of species.

Year-round carryover effects are driven by migration phenology for Hirundo rustica (Barn Swallow) wintering in West Africa

Abstract Recently, population declines have been reported for many migratory birds. Because of complex life cycles, determining the causes for such declines is often difficult. Thus, migratory birds are of special conservation interest. We studied the migratory behavior of Hirundo rustica (Barn Swallow) tagged with solar geolocators and determined carryover effects during the entire annual cycle from one breeding season to the next. We used a partial least squares path model (PLS-PM) to disentangle migratory and breeding events that occur in chronological order. In addition, we controlled for broad environmental conditions in the wintering grounds (NDVI and latitude) and the specific molting habitat (δ13C). We did not find a carryover effect from reproduction investment in the attachment year to breeding success in the subsequent year. Individuals that invested more in reproduction departed earlier from the breeding colonies, but this in turn did not affect the onset of autumn migration. Thus, the premigratory period should be acting as a buffer stage counteracting any previous carryover effects from reproduction investment. On the other hand, we found a long-lasting domino effect from the onset of autumn migration to subsequent breeding success, consistent with the notion of a migratory race. Specifically, individuals which started earlier in the autumn migration arrived earlier to the wintering grounds, started earlier in the spring migration arrived earlier to the breeding colonies, and had a higher breeding success. We highlight that the premigratory period (i.e., the time elapsed between departure from breeding areas and the onset of autumn migration) should be important for the life cycle of migratory species, but it has been frequently overlooked.