Habitat Gradient Research Articles

Patterns of diversity change for forest vegetation across different climatic regions - A compound habitat gradient analysis approach

Biotic diversity of ecological communities can be driven by a mixture of climatic, soil and biotic factors from local to regional scales. Patterns of diversity change were often examined along latitudinal or elevational gradients, which were mainly driven by climatic factors. However, few studies have assessed biodiversity patterns along both abiotic and biotic gradients simultaneously. Here, we established 309 forest dynamics plots of typical forest vegetation types (tropical rainforest, subtropical evergreen deciduous broad-leaf mixed forest, warm temperate conifer broad-leaf mixed forest, and temperate conifer forest) in seven biogeographic regions across four climatic regions (tropical, subtropical, warm temperate, and temperate regions) in China. A total of 46,280 tree individuals of 801 species in these plots were tagged, investigated and mapped, and six functional traits and seven soil factors were sampled and measured, in addition, data on three climatic factors were extracted from Worldclim. Principal component analysis (PCA) was used to build the compound habitat gradient (CHG) combining the biotic and abiotic factors. Patterns of changes in species and functional diversity along the CHG were analyzed. Results showed that species richness, Shannon-Wiener index and functional richness (FRic) increased but functional divergence (FDiv) decreased along the first axis of the CHG. The models using the first four PCA axes of the CHG and models with the individual variables had more power to explain species diversity than functional diversity. PC1 was the most important predictor in explaining patterns of diversity variation. The null models of FRic and FDiv were significantly negatively correlated with PC1 in the compound habitat gradient, and not with other axes. Our study demonstrates that the compound habitat gradient analysis is an effective approach of exploring patterns of biodiversity change and understanding both the abiotic and biotic factors driving community assembly across different climatic regions.

Impacts of an invasive plant on bird communities differ along a habitat gradient

Plants invasions may have important impacts on populations of the native species including birds. We can expect that these impacts will vary in respect to the ecological context where the species live. Consequences of such a variation are, however, still poorly understood. For this purpose, we studied the responses of bird communities to the invasion of Sosnowsky’s hogweed (Heracleum sosnowskyi) along a gradient from open to forest habitats in relation to the ecological traits of bird species. The research was conducted in southern Poland in spring 2019. Birds were counted twice on 52 site pairs (control and Heracleum). As expected, the invader had generally negative impact on the total number of birds, their species richness and abundance of all bird guilds except the birds living in the ecotone zone. However, the magnitude of these impacts significantly differed along the habitat gradient: the response of ground dwellers and farmland birds to the invasion was more negative towards open habitats, while the opposite pattern, i.e. a more negative response towards forest habitats, was observed in birds associated with bushes. Individual bird species, however, sometimes differed in the direction and severity of the response to the invasion from the guild to which they belonged. Taken together, our results indicate that the impact of Sosnowsky’s hogweed depended on habitats preferred by individual species and whether this alien changed their habitat. This finding should be taken into account when designing management plans for the affected species.

DNA metabarcoding analysis of macroalgal seed banks on shell surface of the limpet Niveotectura pallida

ABSTRACT In macroalgal restoration on urchin barren coasts, understanding the variability in microscopic stages of canopy-forming macroalgae such as kelps and fucoids is critical to reduce restoration effort (i.e. sea urchin removal). In the present study, we used epilithic macroalgae present on the limpet Niveotectura pallida to determine the macroalgal seed bank along a depth gradient of habitats (surf, turf, barren and sandy zones). We collected a total of 46 limpets in two seasons (summer: August and winter: December) and from four zones at Sashiga-hama on the north-east coast of northern Honshu, Japan. The attached organisms on the limpet shells were brushed off and identified using a plastid-encoded rbcL gene and high throughput sequencing (HTS) based DNA metabarcoding. The original data set consisted of 432 macroalgal and 224 microalgal operational taxonomic units (OTUs). For macroalgae, 37, 190 and 205 OTUs were assigned to Ulvophyceae, Phaeophyceae and Rhodophyta, respectively. For canopy-forming macroalgal OTUs, Agaraceae, Alariaceae, Lessoniaceae, Laminariaceae and Sargassaceae were detected. In summer, the OTU was significantly richest in the sandy zone (77.0 ± 15.2 OTUs), but the difference among zones was less conspicuous in winter, ranging from 52.8 ± 16.4 to 64.3 ± 13.2 OTUs. The Shannon–Wiener diversity index showed similar patterns. The laminarialean and sargassacean OTUs were significantly the richest in the sandy zone during summer (p < 0.001). In light of these results, macroalgal restoration (i.e. through sea urchin removal) should be initiated in summer and the sandy zone should be preferentially targeted.

Variation in species richness, composition and herpetological community structure across a tropical habitat gradient of Palawan Island, Philippines

Information on species richness and community structure is invaluable for guiding conservation and management of biodiversity, but is rarely available in the megadiverse biodiversity conservation hotspot of Philippines – particularly for amphibians and reptiles. This study provides the first report and characterisation of amphibians and reptile communities across primary habitat types of the Victoria-Anepahan Mountain Range on Palawan Island along the western edge of the archipelago. A total of 41 amphibian and reptile species were recorded throughout our sampling sites (n = 27 species) or in targeted habitat searches (14 species). A species richness estimator predicted that 35 species may be present in our sampling sites, suggesting that a significant proportion of secretive species may continue to be unrecorded, especially for reptiles. Higher species richness was found in secondary growth than in mixed-use agricultural areas or even pristine forest. The low species richness recorded from pristine forest types may be due to these forests now being restricted to higher elevations where species diversity has been documented to decrease. Our results also show that complex community structures (species assemblages) are to be equally expected in both secondary growth and pristine forests. Together, our results show how species richness and community assemblages may vary across habitats, highlighting that old growth forest does not always support higher species richness, particularly in high elevations.

Phylogenetic signal in the topographic niche of trees: Current and historical significance of habitat structure on the species arrangement pattern within East Asian rugged forests

AbstractTopography often promotes habitat heterogeneity and is a major factor in fine‐grained changes in vegetation. Especially in temperate mountainous regions of East Asia, the distribution of tree species is largely explained by topographic niche differentiation. Because species niche is at least partially a historical product through the evolution of functional traits, phylogenetic signals are expected in the topographic arrangement pattern of species, although this has not been fully investigated. Thus, we examined common temperate trees in a 306 ha watershed on Mt Tanzawa, central Japan. The topographic niche position of each species was explained with two principal component analysis (PCA) axes, which aligned with the topographic structure of the watershed. High scores on PC1 reflected lower elevations, steeper slopes and nearby valleys. Higher scores on PC2 indicated thicker soil, more south‐facing slopes, slighter slope inclinations and nearby valleys. The former indicated the species were aligned on a habitat gradient of land‐surface instability, for which the gradient is typical under the current geological conditions. The latter indicated that a niche axis for resource availability relating to water, nutrients and light or heat existed. A phylogenetic signal, identified by Pagel's λ and the Mantel test, was detected for PC2 scores. However, the species arrangement along PC1 was independent of phylogeny. Our results suggested that the topographic niche of tree species in this area is caused by both relatively recently derived traits regarding adaptation to unstable land surfaces and conservative traits derived through plant evolution.

Distribution of ticks, tick-borne pathogens and the associated local environmental factors including small mammals and livestock, in two French agricultural sites: the OSCAR database.

BackgroundIn Europe, ticks are major vectors of both human and livestock pathogens (e.g. Lyme disease, granulocytic anaplasmosis, bovine babesiosis). Agricultural landscapes, where animal breeding is a major activity, constitute a mosaic of habitat types of various quality for tick survival and are used at different frequencies by wild and domestic hosts across seasons. This habitat heterogeneity, in time and space, conditions the dynamics of these host-vector-pathogen systems and thus drives acarological risk (defined as the density of infected ticks). The principal objective of the OSCAR project (2011-2016) was to examine the links between this heterogeneity and acarological risk for humans and their domestic animals. Here, we present the data associated with this project.New informationThis paper reports a database on the distribution and densities of I. ricinus ticks - the most common tick species in French agricultural landscapes - and the prevalence of three tick-borne pathogens (Anaplasma phagocytophilum, Borrelia spp. and Babesia spp.) in two sites in north-western (“Zone Atelier Armorique”: ZA site) and south-western (“Vallées et Coteaux de Gascogne”: VG site) France. The distribution and density of ticks along a gradient of wooded habitats, as well as biotic variables, such as the presence and abundance of their principal domestic (livestock) and wild hosts (small mammals), were measured from forest cores and edges to more or less isolated hedges, all bordering meadows. Ticks, small mammals and information on local environmental conditions were collected along 90 transects in each of the two sites in spring and autumn 2012 and 2013 and in spring 2014, corresponding to the main periods of tick activity. Local environmental conditions were recorded along each tick and small mammal transect: habitat type, vegetation type and characteristics, slope and traces of livestock presence. Samples consisted of questing ticks collected on the vegetation (mainly I. ricinus nymphs), biopsies of captured small mammals and ticks fixed on small mammals. In the VG site, livestock occurrence and abundance were recorded each week along each tick transect.A total of 29004 questing ticks and 1230 small mammals were captured during the study across the two sites and over the five field campaigns. All questing nymphs (N = 12287) and questing adults (N = 646) were identified to species. Ticks from small mammals (N = 1359) were also identified to life stage. Questing nymphs (N = 4518 I. ricinus) and trapped small mammals (N = 908) were analysed for three pathogenic agents: A. phagocytophilum, Borrelia spp. and Babesia spp.In the VG site, the average prevalence in I. ricinus nymphs for A. phagocytophilum, Borrelia spp. and Babesia spp. were, respectively 1.9% [95% CI: 1.2-2.5], 2.5% [95% CI: 1.8-3.2] and 2.7% [95% CI: 2.0-3.4]. In small mammals, no A. phagocytophilum was detected, but the prevalence for Borrelia spp. was 4.2% [95% CI: 0.9-7.5]. On this site, there was no screening of small mammals for Babesia spp. In ZA site, the average prevalence in nymphs for A. phagocytophilum, Borrelia spp. and Babesia were, respectively 2.2% [95% CI: 1.6-2.7], 3.0% [95% CI: 2.3-3.6] and 3.1% [95% CI: 2.5-3.8]. In small mammals, the prevalence of A. phagocytophilum and Borrelia spp. were, respectively 6.9% [95% CI: 4.9-8.9] and 4.1% [95% CI: 2.7-5.9]. A single animal was found positive for Babesia microti at this site amongst the 597 tested.

Community structure - Ecosystem function relationships in the Congo Basin methane cycle depend on the physiological scale of function.

Belowground ecosystem processes can be highly variable and difficult to predict using microbial community data. Here, we argue that this stems from at least three issues: (a) complex covariance structure of samples (with environmental conditions or spatial proximity) can make distinguishing biotic drivers a challenge; (b) communities can control ecosystem processes through multiple mechanisms, making the identification of these controls a challenge; and (c) ecosystem function assessments can be broad in physiological scale, encapsulating multiple processes with unique microbially mediated controls. We test these assertions using methane (CH4 )-cycling processes in soil samples collected along a wetland-to-upland habitat gradient in the Congo Basin. We perform our measurements of function under controlled laboratory conditions and statistically control for environmental covariates to aid in identifying biotic drivers. We divide measurements of microbial communities into four attributes (abundance, activity, composition, and diversity) that represent different forms of community control. Lastly, our process measurements differ in physiological scale, including broader processes (gross methanogenesis and methanotrophy) that involve more mediating groups, to finer processes (hydrogenotrophic methanogenesis and high-affinity CH4 oxidation) with fewer mediating groups. We observed that finer scale processes can be more readily predicted from microbial community structure than broader scale processes. In addition, the nature of those relationships differed, with broad processes limited by abundance while fine-scale processes were associated with diversity and composition. These findings demonstrate the importance of carefully defining the physiological scale of ecosystem function and performing community measurements that represent the range of possible controls on ecosystem processes.

Effects of community composition on plant-pollinator interaction networks across a spatial gradient of oak-savanna habitats.

Distance between habitats may impact the composition and corresponding interactions between trophic levels. Mutualistic networks, such as those of plants and pollinators tend to have a core set of properties that often relate to the resilience of the community, or the ability of the community to retain function and structure after a disturbance. Furthermore, network structure is highly dependent on the number of specialists and generalists; however, it is unclear how different groups of species with various life-history strategies influence network structure. In this study, we evaluated how the composition of plants and pollinators within 16 oak-savanna sites changed across a latitudinal gradient. In addition, we evaluated how the abundance of different groups of plants and pollinators affected network metrics related to resilience. We found that the composition of plants and pollinators varied between ecoregions, while pollinator composition further varied with habitat characteristics. Network metrics displayed no spatial pattern but were related to the abundance of several pollinator groups. Above-ground nesting insects had a positive relationship with nestedness and a negative relationship with modularity, while predatory larvae had a negative relationship with modularity. Thus, above-ground nesting insects and predatory larvae could be expected to increase network resilience. This study emphasizes how spatial scales can influence species compositions, which in turn affects the structure of interactions in the community with implications for resilience.

Breaking down insect stoichiometry into chitin-based and internal elemental traits: Patterns and correlates of continent-wide intraspecific variation in the largest European saproxylic beetle

Stoichiometric, trophic and ecotoxicological data have traditionally been acquired from patterns of variation in elemental traits of whole invertebrate bodies, whereas the critical issue of the extracellular origin of some portion of elements, such as those present in ingested food and internal organs, has been ignored. Here we investigated an unexplored, yet crucial, question relating to whether, and to what degree, metals from two major body fractions: exoskeleton (elytra) and internal (body organs with gut material present in abdomens), are correlated with each other in wild populations of the largest European saproxylic insect, the Stag Beetle Lucanus cervus, and how metals from these two fractions vary with insect size and local habitat conditions. We examined the continent-wide variation in the concentrations of 12 chemical elements (Ca, Mg, K, Na, Mn, Fe, Zn, Cu, As, Cd, Pb and Ni) measured in the elytra and abdomen of specimens from 28 populations inhabiting an urban-woodland habitat gradient across the species’ entire distributional range from Spain to Russia. Across populations, elemental concentrations (except Ni and Pb) were 2–13 times higher in abdominal samples than in elytra, and the magnitude of these differences was related to both insect size and local habitat conditions. Smaller individuals from both woodland and urban habitat tended to have higher concentrations of trace elements (Zn, As, Cd, Pb and Ni). The concentration of only six elements (Mg, K, Na, Mn, Cd and Ni) was correlated in the elytra and abdomen at the individual and population levels, implying a limitation to the broader applicability of elytra as a surrogate for internal elemental pools. We highlight that in non-feeding adult saproxylic beetles, minerals, acquired during the larval stage, may be concentrated in the large quantities of residual body fat.

Plant response to N availability in permafrost-affected alpine wetlands in arid and semi-arid climate zones

Nutrient cycling in alpine permafrost-affected wetlands remains insufficiently studied, as it is influenced by a complex network of interrelated climatic and environmental factors, at both regional and local scale. Therefore, we applied mathematical models to examine relationship between environmental factors and plant functional traits reflecting N availability in wetland communities developed under locally variable conditions in a geographic and climatic gradient of high-altitude habitats. Moreover, we assessed impact of local differences in soil chemistry on plant fractionation of N isotopes as a response to N availability. Based on environmental data and chemistry of biomass from 192 study sites from the Pamir Mountains (Tajikistan) and Khangai and Khentei Mountains (Mongolia), a matrix of rank correlations was prepared for regional and local factors and community level plant functional traits. For the traits that were highly correlated either with regional or with local drivers (that is plant N:P ratio and plant δ15N), linear models were built, with a limited set of predictors selected according to the Risk Inflation Criterion and the SOS algorithm. The models were fitted for each of the studied regions. Presented regional models indicated significant influence of soil NH4+ and/or PO43− content on plant N:P ratio, which showed increase with altitude and lowering precipitation. Thus, its values clearly distinguished between the Pamir Mountains (high N:P) and the Mongolian ranges (low N:P). Models for plant δ15N showed its strong positive correlations with soil δ15N and soil salinity. Average values of plant δ15N were comparable for both study areas. The studied plant functional traits showed different response to regional and local drivers. Plant N:P ratio was controlled by regional drivers via their influence on soil NH4+ content. Contrastingly, plant δ15N was significantly affected by local factors, namely soil δ15N and soil salinity expressed as Na:EC.

Estuarine-terrestrial habitat gradients enhance nursery function for resident and transient fishes in the San Francisco Estuary

Nursery functions of US West Coast drowned river valley estuaries are not well understood. Using long-term fish-monitoring data (1995-2017) in Suisun Marsh, San Francisco Estuary, California, USA, we examined spatial and temporal trends in abundance and apparent growth of fishes with diverse life-history types. Focal species were Sacramento splittail Pogonichthys macrolepidotus, striped bass Morone saxatilis, tule perch Hysterocarpus traski, and starry flounder Platichthys stellatus, which collectively represented 55% of total catch (n = 140092). We identified keystone habitat patches that functioned as nursery hotspots during the peak young-of-the-year recruitment window. Deep, flow-through sloughs close to the open estuary were important nursery habitats for the marine transient starry flounder. In contrast, splittail and striped bass mostly migrated through such corridors to rear in shallow, dead-end sloughs bisecting tidal marsh plains, managed tidal ponds, and uplands. Tule perch were concentrated in shallow, interior sloughs, reflecting their resident life-history type and adaptations to variable conditions in a small home range. Interactions among freshwater flows and stationary habitat features (e.g. channel depth, land-to-open-water ratio) were related to fish abundance; however, species and age classes differed in their relationships to these interactions, suggesting a mechanism for habitat partitioning in space and time. Overall, we inferred that habitat connectivity—longitudinal, lateral, and vertical—along the estuarine-terrestrial gradient was a driver of fish species diversity and productivity. Consideration of seascape-landscape dynamics across multiple spatial and temporal scales in estuaries should help maintain or increase fish populations and ecological resilience in the face of rising sea levels and other environmental stressors.

Ecogeographic Units and the Protection of Intraspecific Diversity

A procedure for dividing species into ecogeographic units (EGUs) and ecogeographic aggregations (EGAs) identified according to data on habitat gradients and distinctive features of migration (gene flows) is discussed. It is noted that every EGU or EGA can be regarded as a unit of reserves, reproduction, exploitation, or protection.

Modelling patterns of coexistence of three congeneric headwater fishes

Abstract Mechanisms driving patterns of occurrence and co‐occurrence among North American freshwater fishes are poorly understood. In particular, the influence of biotic interactions on coexistence among stream reaches and their effects on regional species distribution patterns is not well understood for congeneric headwater fishes. Occupancy models provide a useful framework for examining patterns of co‐occurrence while also accounting for imperfect detection. Occupancy models may be extended to test for evidence that a dominant species influences the occurrence of a subordinate species and thus evaluate support for the hypothesis that species interactions drive patterns of coexistence. We examined patterns of occurrence and co‐occurrence at the stream‐reach scale among three species of darters (Percidae: Etheostomatinae) that occupy headwater streams within a Gulf Coastal Plain drainage in the south‐eastern U.S.A. We assessed species occurrences at 97 sites in first‐ to third‐order streams on one occasion each and used data from four sub‐reaches sampled with equal effort at each site to estimate species‐specific detection probabilities. Following sampling, a suite of habitat variables was collected at three equidistant points along each of the three transects established within a sub‐reach. Coarse (stream‐segment, catchment, network) scale variables were also incorporated using geospatial data. Single‐species and two‐species occupancy models were used to examine patterns of occupancy and coexistence. The occupancy of each species was influenced by distinct habitat variables. Goldstripe darters (Etheostoma parvipinne) were constrained by a stream size gradient, groundwater input appeared to influence the occurrence of Yazoo darters (Etheostoma raneyi), and local habitat heterogeneity (e.g. variation in depth and current velocity) appeared to influence the occupancy of redspot darters (Etheostoma artesiae). We found no evidence that the presence of one species influenced the occurrence of another within a stream‐reach based on two‐species occupancy models. Rather, species co‐occurrences were best explained as independent occurrences within a stream‐reach according to species‐specific habitat associations. Occupancy modelling may provide a suitable framework for evaluating the influence of biotic interactions among congeneric stream fishes along species‐specific habitat gradients at the stream reach scale. Our study offers insight into how habitat variation can influence coexistence of potential competitors across a large river system.

Limitation of complementary resources affects colony growth, foraging behavior, and reproduction in bumble bees.

Resource availability in agricultural landscapes has been disturbed for many organisms, including pollinator species. Abundance and diversity in flower availability benefit bee populations; however, little is known about which of protein or carbohydrate resources may limit their growth and reproductive performance. Here, we test the hypothesis of complementary resource limitation using a supplemental feeding approach. We applied this assumption with bumble bees (Bombus terrestris), assuming that colony growth and reproductive performance should depend on the continuous supply of carbohydrates and proteins, through the foraging for nectar and pollen, respectively. We placed wild-caught bumble bee colonies along a landscape gradient of seminatural habitats, and monitored the colonies' weight, foraging activity, and reproductive performance during the whole colony cycle. We performed supplemental feeding as an indicator of landscape resource limitation, using a factorial design consisting of the addition of sugar water (carbohydrate, supplemented or not) crossed by pollen (protein, supplemented or not). Bumble bee colony dynamics showed a clear seasonal pattern with a period of growth followed by a period of stagnation. Higher abundance of seminatural habitats resulted in reducing the proportion of pollen foragers relative to all foragers in both periods, and in improving the reproductive performance of bumble bees. Interestingly, the supplemental feeding of sugar water positively affected the colony weight during the stagnation period, and the supplemental feeding of pollen mitigated the landscape effect on pollen collection investment. Single and combined supplementation of sugar water and pollen increased the positive effect of seminatural habitats on reproductive performance. This study reveals a potential colimitation in pollen and nectar resources affecting foraging behavior and reproductive performance in bumble bees, and indicates that even in mixed agricultural landscapes with higher proportions of seminatural habitats, bumble bee populations face resource limitations. We conclude that the seasonal management of floral resources must be considered in conservation to support bumble bee populations and pollination services in farmlands.

Relative Efficiency of Pitfall Trapping vs. Nocturnal Hand Collecting in Assessing Soil-Dwelling Spider Diversity along A Structural Gradient of Neotropical Habitats

Assessing spider diversity remains a great challenge, especially in tropical habitats where dozens of species can locally co-occur. Pitfall trapping is one of the most widely used techniques to collect spiders, but it suffers from several biases, and its accuracy likely varies with habitat complexity. In this study, we compared the efficiency of passive pitfall trapping versus active nocturnal hand collecting (NHC) to capture low understory-dwelling spider taxonomical (morpho-species) and functional (hunting guilds) diversity along a structural gradient of habitats in French Guiana. We focused on four habitats describing a structural gradient: garden to the orchard to the forest edge to the undisturbed forest. Overall, estimated morpho-species richness and composition did not vary consistently between habitats, but abundances of ground-hunting spiders decreased significantly with increasing habitat complexity. We found habitat-dependence differences in taxonomic diversity between sampling strategies: NHC revealed higher diversity in the orchard, whereas pitfalls resulted in higher diversity in the forest. Species turnover resulted in high dissimilarity in species composition between habitats using either method. This study shows how pitfall trapping is influenced by habitat structure, rendering this sampling method incomplete for complex, tropical environments. However, pitfall traps remain a valuable component of inventories because they sample distinct assemblage of spiders.

Intraspecific variation in tree lizard escape behaviour in relation to habitat and temperature

Abstract Optimal escape theory has proven useful for understanding the dynamics of antipredator behaviour in animals; however, approaches are often limited to single-population studies. We studied how the escape behaviour of tree lizards (Urosaurus ornatus) varied across a disturbance gradient. We also considered how sex, body temperature, and perch temperature affected their escape decisions. Both sexes exhibited similar response patterns; however, lizards in the most-disturbed habitat, as well as cooler (body or perch temperature) lizards, initiated escape earlier (but did not flee further) than other animals. Increased wariness as indicated by earlier escape suggests that frequently-disturbed, more-open localities may be stressful habitats for species like U. ornatus. In addition, because cooler temperatures limit locomotor performance capacity, escape decisions should also depend on a species’ thermal ecology. Overall, we stress the importance of multi-population approaches for capturing the variety of ways species adaptively respond to the threat of predation across habitat gradients.

Occurrence and Co‐Occurrence Patterns of Gar in River–Floodplain Habitats: Methods to Leverage Species Coexistence to Benefit Distributional Models

AbstractHabitat segregation and hypothesized biotic interactions among coexisting gar species may confound attempts to describe the distributions of these species by using only macrohabitat availability in the presence of conspecifics. However, the strength of interactions among gar species and the spatial scale at which they occur are largely unknown. We used an existing data set to evaluate the co‐occurrence patterns (i.e., random assemblages versus species co‐occurring more or less than expected at random) of three gar species in 62 dynamic river–floodplain habitats associated with the lower Mississippi River and its major tributaries. A novel parameterization of a multispecies occupancy model was utilized to examine the spatial relationships among the full array of possible gar assemblages across a gradient of floodplain habitats. Spotted Gar Lepisosteus oculatus were the most abundant and frequently encountered species (~78% of samples). Shortnose Gar L. platostomus (~27% of samples) and Longnose Gar L. osseus (~12% of samples) were relatively uncommon, and no Alligator Gar Atractosteus spatula were captured in over 600 electrofishing transects. Estimated detection probabilities of the encountered species varied (range = 0.27 [Longnose Gar] to 0.80 [Spotted Gar]), and five species‐specific environmental and sampling covariates predicted detection. Relatively strong co‐occurrence patterns between Shortnose Gar and Longnose Gar were significantly influenced by the proximity of a floodplain lake to a river (i.e., river : lake elevation change and linear distance) and by lake latitude. In contrast, the occurrence patterns of Spotted Gar were largely independent of the other species and had minor influences on the relationship between Longnose Gar and Shortnose Gar. We demonstrate how species co‐occurrence patterns can be leveraged to reduce uncertainty associated with species‐specific occupancy estimates and how species distribution models can be improved by utilizing abiotic and biotic features of the target ecosystems.

Effects of time-since-fire on ant-plant interactions in southern Brazilian grasslands

Abstract Grasslands and savannas are dynamic ecosystems, strongly regulated by environmental disturbances such as fire. Maintaining disturbance regimes in these ecosystems are of great conservation concern, and require studies with the use of ecological indicators. Biotic interactions are a major component of biodiversity that are particularly sensitive to environmental changes, and therefore should be considered in ecosystem assessment and monitoring. One of the most common interactions between insects and plants is mediated by extrafloral nectaries (EFNs), where ants use food resources from plants in exchange for protection against herbivores. Here, we explored variations on this ant-plant interaction across a post-fire successional gradient (i.e., few months to more than two years since the last fire) in eleven grassland patches in South Brazil. We evaluated time-since-fire effects on (i) the grassland habitat structure, (ii) an EFN-bearing plant population: Chamaecrista repens, (iii) the EFN-visiting ant communities, and (iv) the ant-plant ecological networks. We expected fire-induced habitat changes to benefit this plant population, and to produce positive cascading effects on interacting ants, thus influencing the structure of ant-plant networks. Freshly-burnt sites presented increased C. repens abundance, and larger individuals with more reproductive structures and EFNs in comparison with sites longer without disturbances. Plant abundance and size were inversely related to the cover of dominant grasses along the habitat gradient. The density of EFN-visiting ants, but not their species richness, increased in freshly-burnt sites, stimulated by the greater resource offer and the habitat openness, which probably facilitated ant activity. Moreover, with increasing time-since-fire, ants interacted with fewer plants, and few species formed the network generalist core. These results could further suggest that the defense service against herbivory provided by ants is also diminished in grasslands longer without disturbances. Overall, by using a series of indicators of habitat change from multiple ecological levels, this study highlights the importance of disturbance for grassland biodiversity and their ecological interactions, helping to improve management decisions.

Biotic interactions help explain variation in elevational range limits of birds among Bornean mountains

AbstractAimPhysiological tolerances and biotic interactions along habitat gradients are thought to influence species occurrence. Distributional differences caused by such forces are particularly noticeable on tropical mountains, where high species turnover along elevational gradients occurs over relatively short distances and elevational distributions of particular species can shift among mountains. Such shifts are interpreted as evidence of the importance of spatial variation in interspecific competition and habitat or climatic gradients. To assess the relative importance of competition and compression of habitat and climatic zones in setting range limits, we examined differences in elevational ranges of forest bird species among four Bornean mountains with distinct features.LocationBornean mountains Kinabalu, Mulu, Pueh and Topap Oso.TaxonRain forest bird communities along elevational gradients.MethodsWe surveyed the elevational ranges of rain forest birds on four mountains in Borneo to test which environmental variables—habitat zone compression or presence of likely competitors—best predicted differences in elevational ranges of species among mountains. For this purpose, we used two complementary tests: a comparison of elevational range limits between pairs of mountains, and linear mixed models with naïve occupancy as the response variable.ResultsWe found that lowland species occur higher in elevation on two small mountains compared to Mt. Mulu. This result is inconsistent with the expectation that distributions of habitats are elevationally compressed on small mountains, but is consistent with the hypothesis that a reduction in competition (likely diffuse) on short mountains, which largely lack montane specialist species, allows lowland species to occur higher in elevation. The relative influence of competition changes with elevation, and the correlation between lower range limits of montane species and the distribution of their competitors was weaker than in lowland species.Main conclusionsThese findings provide support for the importance of biotic interactions in setting elevational range limits of tropical bird species, although abiotic gradients explain the majority of distribution patterns. Thus, models predicting range shifts under climate change scenarios must include not only climatic variables, as is currently most common, but also information on potentially resulting changes in species interactions, especially for lowland species.

Drivers of habitat partitioning among three Quercus species along a hydrologic gradient.

A critical process that allows multiple, similar species to coexist in an ecological community is their ability to partition local habitat gradients. The mechanisms that underlie this separation at local scales may include niche differences associated with their biogeographic history, differences in ecological function associated with the degree of shared ancestry and trait-based performance differences, which may be related to spatial or temporal variation in habitat. In this study we measured traits related to water-use, growth and stress tolerance in mature trees and seedlings of three oak species (Quercus alba L., Quercus falcata Michx. and Quercus palustris Münchh). which co-occur in temperate forests across the eastern USA but tend to be found in contrasting hydrologic environments. The three species showed significant differences in their local distributions along a hydrologic gradient. We tested three possible mechanisms that influence their contrasting local environmental distributions and promote their long-term co-existence: (i) differences in their climatic distributions across a broad geographic range, (ii) differences in functional traits related to water use, drought tolerance and growth and (iii) contrasting responses to temporal variation in water availability. We identified key differences between the species in both their range-wide climatic distributions (especially aridity index and mean annual temperature) and physiological traits in mature trees and seedlings, including daily water loss, hydraulic conductance, stress responses, growth rate and biomass allocation. Taken together, these differences explain the habitat partitioning that allows three closely related species to co-occur locally.