Growth Medium Research Articles

Ultrasound-assisted fungal self-growth and heteroatom doping for the preparation of high-performance lignocellulose-based supercapacitor electrodes

Biomass materials are widely used as supercapacitor electrode materials due to their cost-effectiveness and eco-friendliness. In this work, ultrasound-assisted impregnation was employed for the thorough mixing of the liquid medium, and fungal treatment was conducted on the three main components of lignocellulose to prepare a fungi-modified heteroatom-doped lignocellulose-based carbon material (LCF-NP). The effects of heteroatom doping, the content of the three main components, and fungal modification on the electrochemical performance of lignocellulose-based carbon materials was investigated. The results revealed the synergistic effect of heteroatom doping and fungal treatment on the electrochemical performance. Compared with its counterpart free of fungal treatment, LCF-NP has a more reasonable pore structure and exhibits excellent electrochemical performance. LCF-NP porous carbon material has the highest specific surface area (792 m2/g), large pore volume (0.523 cm3/g), and ideal specific capacitance (1940 mF/cm2) under the conditions of 1.0 M Na2SO4 electrolyte and current density of 0.5 mA/cm2. After 10,000 cycles, there is almost no loss of capacitance. These results indicate that the joint utilization of heteroatom doping and fungal treatment has a promising application prospect in pore structure regulation and electrochemical performance improvement. This study provides a new strategy for the preparation of lignocellulose-based carbon electrode materials.

Unveiling the complexity of rifampicin drug susceptibility testing in Mycobacterium tuberculosis: comparative analysis with next-generation sequencing.

Introduction. The discordance between phenotypic and molecular methods of rifampicin (RIF) drug susceptibility testing (DST) in Mycobacterium tuberculosis poses a significant challenge, potentially resulting in misdiagnosis and inappropriate treatment.Hypothesis/gap statement. A comparison of RIF phenotypic and molecular methods for DST, including whole genome sequencing (WGS), may provide a better understanding of resistance mechanisms.Aim. This study aims to compare RIF DST in M. tuberculosis using two phenotypic and molecular methods including the GeneXpert RIF Assay (GX) and WGS for better understanding.Methodology. The study evaluated two phenotypic liquid medium methods [Lowenstein-Jensen (LJ) and Mycobacterium Growth Indicator Tube (MGIT)], one targeted molecular method (GX), and one WGS method. Moreover, mutational frequency in ponA1 and ponA2 was also screened in the current and previous RIF resistance M. tuberculosis genomic isolates to find their compensatory role.Results. A total of 25 RIF-resistant isolates, including nine from treatment failures and relapse cases with both discordant and concordant DST results on LJ, MGIT and GX, were subjected to WGS. The phenotypic DST results indicated that 11 isolates (44%) were susceptible on LJ and MGIT but resistant on GX. These isolates exhibited multiple mutations in rpoB, including Thr444>Ala, Leu430>Pro, Leu430>Arg, Asp435>Gly, His445>Asn and Asn438>Lys. Conversely, four isolates that were susceptible on GX and MGIT but resistant on LJ were wild type for rpoB in WGS. However, these isolates possessed several novel mutations in the PonA1 gene, including a 10 nt insertion and two nonsynonymous mutations (Ala394>Ser, Pro631>Ser), as well as one nonsynonymous mutation (Pro780>Arg) in PonA2. The discordance rate of RIF DST is higher on MGIT than on LJ and GX when compared to WGS. These discordances in the Delhi/CAS lineages were primarily associated with failure and relapse cases.Conclusion. The WGS of RIF resistance is relatively expensive, but it may be considered for isolates with discordant DST results on MGIT, LJ and GX to ensure accurate diagnosis and appropriate treatment options.

Анализ изменения стойкости бетонных конструкций в промышленности при химическом воздействии с учетом потенциальных рисков для работников и окружающей среды

The requirements for industrial facilities’ resistance to external impacts and reliability are higher when compared with other facilities. The most common construction material, inter alia, in various industrial sectors is concrete due to its easy production and use, relatively low cost, and wide application. The environmental cleanliness is traditionally considered one of the advantages of concrete. All lifecycle stages of concrete, however, from the production process until the end of the service life of ready-to-use objects, imply serious environmental risks. Therefore, already at the design stage of (ferro)concrete structures, it is necessary to consider, in addition to the functions of the future object, the external impacts it will be exposed to. Concrete properties are not constant and change from the moment of mixing, during the transportation, and until its complete hardening. Apart from the composition and compliance with standards, many factors affect the properties. One of the main factors is an aggressive environment, whose impact can not only damage but completely disable building structures. The design service life of structures must exceed the operation lifecycle or comply with it. Concrete is considered durable if, during the design service life, it withstands loads and negative impacts of external factors and remains undamaged, taking into account industrial operation and timely maintenance. Already at the beginning of design jobs, the duration of the design service life must be estimated correctly. Both under- and overestimation of the design service life of ferroconcrete structures reduce safety and reliability and cause an unjustified rise in production and operating costs. The authors of the study analyze problems that may arise at the plants of the chemical industry in case of destruction of concrete under the impact of the aggressive liquid medium by conducting a practical study in conditions as realistic as possible. Within the framework of accelerated study, the authors examined the changes in concrete strength by control samples under pressure impacted by hydrochloric acid and sodium hydroxide. Test trials have clearly demonstrated the importance of the correct definition of concrete class in accordance with the medium of application. This must be considered during the practical work of employees of disaster protection agencies at industrial facilities with tanks to collect and store aggressive liquids, including firewater.

Enhancing aquaponic cultivation in Indonesia: A comparative study of bioball biofilters with different additives

Abstract The development of aquaponic cultivation in Indonesia remains limited despite its potential to significantly boost farmers’ and communities’ income. In aquaponics, fish are regularly fed, while plants solely rely on nutrients derived from leftover feed and fish waste, without external supplementation. Biofilters play a crucial role in aquaponic systems, providing a growth medium for microorganisms that convert fish feces’ ammonia into nitrates, essential for plant nutrition. In general, biofilters use bioball material, so as to optimize the biofilter, this study compares the effectiveness of different materials, namely activated charcoal, shells, and coconut fiber, when incorporated into bioball biofilters within aquaponic systems. The research was conducted on an aquaponic installation featuring an NFT system utilizing PVC pipes. The experiment involved 45 tilapia fish, each measuring 7-11 cm and weighing 10-15 grams, alongside red lettuce plants planted in 10 holes per pipe, with 6 replications. After 45 days from planting, the plants were harvested, and observations were made on both plant and fish growth. The growth of red lettuce plants in the biofilter installation with shells addition (BS) showed the best results based on parameters such as plant height, leaf width, plant dry weight, and shoot:root ratio. The installation with coconut fiber addition (BS) showed the best results in terms of number of leaves. BA installation with activated carcoal addition (BA) showed the best results in terms of number of Leaf chlorophyll. The highest percentage of survival for Nile tilapia was observed in the BS and BA installation with a rate of 88.89%, followed by 78.57% in the BC installation, and 60.46% in the BB installation.

Visualizing liquid distribution across hyphal networks with cellular resolution.

Filamentous fungi and fungal-like organisms contribute to a wide range of important ecosystem functions. Evidence has shown the movement of liquid across mycelial networks in unsaturated environments, such as soil. However, tools to investigate liquid movement along hyphae at the level of the single cell are still lacking. Microfluidic devices permit the study of fungal and fungal-like organisms with cellular resolution as they can confine hyphae to a single optical plane, which is compatible with microscopy imaging over longer timescales and allows for precise control of the microchannel environment. The aim of this study was to develop a method that enables the visualization and quantification of liquid movement on hyphae of fungal and fungal-like microorganisms. For this, the fungal-fungal interaction microfluidic device was modified to allow for the maintenance of unsaturated microchannel conditions. Fluorescein-containing growth medium solidified with agar was used to track liquid transported by hyphae via fluorescence microscopy. Our key findings highlight the suitability of this novel methodology for the visualization of liquid movement by hyphae over varying time scales and the ability to quantify the movement of liquid along hyphae. Furthermore, we showed that at the cellular level, extracellular movement of liquid along hyphae can be bidirectional and highly dynamic, uncovering a possible link between liquid movement and hyphal growth characteristics. We envisage that this method can be applied to facilitate future research probing the parameters contributing to hyphal liquid movement and is an essential step for studying the phenomenon of fungal highways.

Directing Rat Hair Follicle Stem Cells Toward Neuronal Lineage With Enhanced Trophic Factor Expression

Background: Hair follicle stem cells (HFSCs) are promising candidates for cell-based therapies in neurodegenerative diseases because of their ability to differentiate into neural lineages and exert paracrine effects in damaged tissues. However, their clinical application faces challenges, particularly in efficiently guiding them toward neural lineages. This study explores using chick embryo extract (CEE) to enhance HFSCs’ secretory capacity and neuronal differentiation. Materials and Methods: HFSCs from rat whisker pads were cultured in growth medium supplemented with either 20% FBS or a combination of 10% FBS and 10% CEE, transitioning to 20% FBS after the first subculture. We conducted gene expression profiling of lineage commitment markers and neurotrophic factors in both experimental groups, alongside morphological assessments and protein expression analyses. Results: CEE supplementation during migration increased neuronal differentiation, evidenced by more cells with neurites and higher MAP2 expression at both the gene and protein levels. CEE also inhibited the expression of PDGFR-α, indicating a suppression of differentiation toward Schwann cells. Furthermore, we observed increased levels of trophic factors such as BDNF and VEGF at passage 3 induced by CEE supplementation. Conclusions: Enhancing the neuronal lineage commitment of hair follicle stem cells (HFSCs) and boosting the expression of trophic and angiogenic factors through short-term CEE preconditioning during their migratory stage presents a compelling approach. This strategy holds great promise in enhancing the effectiveness of stem cell-based therapies for neurological disorders.

Exploring quorum sensing for inducing bioactives overproduction in the dinoflagellate microalga Amphidinium carterae

The dinoflagellate Amphidinium carterae is a promising source of unique bioactive compounds with potential applications in diverse industries. Abiotic strategies for increasing bioactive cell quota have been preferred for cost-effectiveness, controllability, and existing knowledge. The supernatants of Heterosigma akashiwo and Pavlova sp. enhanced haemolytic activity of A. carterae by 2.3 times and improved its final biomass by 10 % when added to the growth medium. Prymnesium parvum supernatant increased the total lipid content of A. carterae by 50 %, while Pleurochrysis roscoffensis supernatant boosted its total carotenoid content by 40 %. This study demonstrated a rapid screening strategy for evaluating growth responses and highlights the potential of using allelopathic strategies to enhance bioactive metabolite production. Utilizing supernatants for the formulation of growth media fosters a circular economy by repurposing resources, minimizing waste, and promoting sustainability in the microalgal biotechnological industry.

The yeast Dothiora sorbi IOJ-3 naturally produced various filamentous sectors with distinct abilities by undergoing DNA demethylation

Some fungi have demonstrated the ability to adapt rapidly to changing environments by exhibiting morphological plasticity, a trait influenced by species and environmental factors. Here, an anamorphic yeast strain IOJ-3 exhibited unique sectorization characteristics, naturally producing diverse filamentous sectors when cultivated on potato dextrose agar (PDA) medium or natural culture medium for durations exceeding 13 days. The strain IOJ-3 and its filamentous sectors were identified as Dothiora sorbi. The morphology of the sectors was consistent and heritable. The life cycle of strain IOJ-3 was investigated through microscopic observation, emphasizing the development of conidiogenous cells as a crucial stage, from which filamentous sectors originate. Some physiological characteristics of IOJ-3 and filamentous sectors are compared, and strain IOJ-3 has a higher antibiotic tolerance than two filamentous sectors, IOJ-3a expands faster on the culture medium, and IOJ-3b can penetrate cellophane. A transcriptomic analysis was conducted to investigate the differentially expressed genes between the yeast form IOJ-3 and its two filamentous sectors, revealing a total of 594 genes that exhibited consistent differential expression relative to IOJ-3, including 44 silencing genes in IOJ-3 that were activated. Gene Ontology analysis indicated that these differentially expressed genes were primarily associated with the cellular component category. Furthermore, adding 5-Azacytidine accelerated filamentous sectorization and increased the proportion of filamentous cells of strain IOJ-3 in PD liquid media, suggesting that the filamentous sectorization observed in strain IOJ-3 is linked to processes of DNA demethylation. In conclusion, this study sheds light on the biological characteristics of D. sorbi regarding morphological transitions and provides substantial direction for exploring genes related to fungal filamentous development.

GROWTH MEDIUM OPTIMIZATION AND GENETIC ADAPTATION OF A WILD EDIBLE AGARICUS MUSHROOM SPECIES IN UGANDA

In this study, experiments were carried out to optimize the growth medium of a selected wild edible Agaricus mushroom. The objectives of this study were to select the most popular edible Agaricus sp. sold in open food markets, and to determine the quantitative composition of the substrate formulation for optimal yield. The most popular species was found to be Agaricus bisporus and fresh samples were used to produce spawn for the experiments to determine the substrate quantitative composition, randomized complete design (RCD) was used. Molasses, chicken manure, and maize bran were varied in ten different formulations. Each formulation was replicated four times. Ammonium nitrate, Rice straw and gypsum remained constant in the different formulations. It was also verified that yield of the mushrooms varied within the different formulations. The best formulation was formulation 5, this formulation produced mean mushroom weight of 3.190https://www.journalijar.com/article/50007/growth-medium-optimization-and-genetic-adaptation-of-a-wild-edible-agaricus-mushroom-species-in-uganda/1.54 and the least produced mean mushroom weight of 1.5±0.41.

Inhibition of cGAS attenuates neonatal hypoxic-ischemic encephalopathy via regulating microglia polarization and pyroptosis.

Neonatal hypoxic-ischemic encephalopathy (HIE) is a condition causing brain injury in newborns with unclear pathogenesis. Cyclic GMP-AMP synthase (cGAS)/stimulator of interferon genes (STING) signaling pathway and NOD-like receptor protein 3 (NLRP3) mediated pyroptosis are thought to be involved in the pathological process of HIE, but whether these two mechanisms act independently is still unknown. Therefore, we aim to clarify whether there is any interaction between these two pathways and thus synergistically affects the progression of HIE. The HIE model of neonatal rats was established using the Rice-Vannucci method. The potential therapeutic effect of RU.521 targeting cGAS on HIE was explored through rescue experiment. Twenty-four hours after modeling was selected as observation point, sham + vehicle group, HIE + vehicle group and HIE + RU.521 group were established. A complete medium of BV2 cells was adjusted to a glucose-free medium, and the oxygen-glucose deprivation model was established after continuous hypoxia for 4 hours and reoxygenation for 12 to 24 hours. 2,3,5-triphenyl tetrazolium chloride staining was employed to detect ischemic cerebral infarction in rat brain tissue, and hematoxylin and eosin staining was used to observe tissue injury. Immunofluorescence was applied to monitor the expression of cGAS. Real-time quantitative polymerase chain reaction and western blot were utilized to detect the expression of messenger RNA and protein. cGAS expression was increased in brain tissues of neonatal rats with HIE, and mainly localized in microglia. RU.521 administration reduced infarct size and pathological damage in rat HIE. Moreover, blocking cGAS with RU.521 significantly reduced inflammatory conditions in the brain by down-regulating STING expression, decreasing NLRP3 inflammasome activation and reducing microglial pyroptosis both in vivo and in vitro. Besides, RU.521 promoted the switching of BV2 cells towards the M2 phenotype. This study revealed a link between the cGAS/STING pathway and the NLRP3/GSDMD/pyroptosis pathway in neonatal HIE. Furthermore, the small molecule compound RU.521 can negatively regulate cGAS/STING/NLRP3/pyroptosis axis and promote M2 polarization in microglia, which provides a potential therapeutic strategy for the treatment of neuroinflammation in HIE.

Antimicrobial blue light inactivation of Pseudomonas aeruginosa: Unraveling the multifaceted impact of wavelength, growth stage, and medium composition

Pseudomonas aeruginosa, a notable pathogen frequently associated with hospital-acquired infections, displays diverse intrinsic and acquired antibiotic resistance mechanisms, posing a significant challenge in infection management. Antimicrobial blue light (aBL) has been demonstrated as a potential alternative for treating P. aeruginosa infections. In this study, we investigated the impact of blue light wavelength, bacterial growth stage, and growth medium composition on the efficacy of aBL. First, we compared the efficacy of light wavelengths 405 nm, 415 nm, and 470 nm in killing three multidrug resistant clinical strains of P. aeruginosa. The findings indicated considerably higher antibacterial efficacy for 405 nm and 415 nm wavelength compared to 470 nm. We then evaluated the impact of the bacterial growth stage on the efficacy of 405 nm light in killing P. aeruginosa using a reference strain PAO1 in exponential, transitional, or stationary phase. We found that bacteria in the exponential phase were the most susceptible to aBL, followed by the transitional phase, while those in the stationary phase exhibited the highest tolerance. Additionally, we quantified the production of reactive oxygen species (ROS) in bacteria using the 2′,7′-dichlorofluorescein diacetate (DCFH-DA) probe and flow cytometry, and observed a positive correlation between aBL efficacy and ROS production. Finally, we determined the influence of growth medium on aBL efficacy. PAO1 was cultivated in brain heart infusion (BHI), Luria-Bertani (LB) broth or Casamino acids (CAA) medium, before being irradiated with aBL at 405 nm. The CAA-grown bacteria exhibited the highest sensitivity to aBL, followed by those grown in LB broth, and the BHI-grown bacteria demonstrated the lowest sensitivity. By incorporating FeCl3, MnCl2, ZnCl2, or the iron chelator 2,2′-bipyridine (BIP) into specific media, we discovered that aBL efficacy was affected by the iron levels in culture media.

Kinetics of Riboflavin Production by Hyphopichia wangnamkhiaoensis under Varying Nutritional Conditions.

Riboflavin, an essential vitamin for humans, is extensively used in various industries, with its global demand being met through fermentative processes. Hyphopichia wangnamkhiaoensis is a novel dimorphic yeast species capable of producing riboflavin. However, the nutritional factors affecting riboflavin production in this yeast species remain unknown. Therefore, we conducted a kinetic study on the effects of various nutritional factors-carbon and energy sources, nitrogen sources, vitamins, and amino acids-on batch riboflavin production by H. wangnamkhiaoensis. Batch experiments were performed in a bubble column bioreactor to evaluate cell growth, substrate consumption, and riboflavin production. The highest riboflavin production was obtained when the yeast growth medium was supplemented with glucose, ammonium sulfate, biotin, and glycine. Using these chemical components, along with the mineral salts from Castañeda-Agullo's culture medium, we formulated a novel, low-cost, and effective culture medium (the RGE medium) for riboflavin production by H. wangnamkhiaoensis. This medium resulted in the highest levels of riboflavin production and volumetric productivity, reaching 16.68 mg/L and 0.713 mg/L·h, respectively, within 21 h of incubation. These findings suggest that H. wangnamkhiaoensis, with its shorter incubation time, could improve the efficiency and cost-effectiveness of industrial riboflavin production, paving the way for more sustainable production methods.

Characterization of membrane pore size using statistical model by facile method of air bubbling in liquid media

Research has shown the correlation between porous membrane pore size and bubble formation including bubble size, frequency, and operating parameters. However, attempts to create a governing equation to establish this correlation have often suffered from low accuracy due to variable interactions. Therefore, it is necessary to identify the significant effects of membrane pore size on bubble formation to establish effective correlations. This study aimed to identify the significant effect of porous membrane pore size on bubble formation using analysis of variance (ANOVA) to establish a mathematical model that predicts porous membrane pore size using bubble formation. To achieve this, various porous membranes were fabricated by varying hydrophilic silica loadings. The resulting membranes were characterized regarding pore size and employed in an aeration device under variable air flow rates and inlet pressures to obtain bubble size and frequency data. JMP software developed a statistical model to characterize membrane pore sizes. The results show a significant effect of bubble formation information on pore size, with a p-value of 0.0089, R2 of 0.96, and root mean squared error (RMSE) value of 0.02. Validation of the model using three membranes demonstrated minor deviations of 0–6.5 %, emphasizing the model's effectiveness in predicting membrane pore size.

Application of biohybrid membranes for arsenic and chromium removal and their impact on pollutant accumulation in soybean (Glycine max L.) seedlings.

Chromium and arsenic are among the priority pollutants to be controlled by regulatory and health agencies due to their ability to accumulate in food chains and the harmful effects on health resulting from the ingestion of food contaminated with metals and metalloids. In the present work, four biohybrid membrane systems were developed as alternatives for the removal of these pollutants, three based on polyvinyl alcohol polymeric mesh (PVA, PVA-magnetite, PVA L-cysteine) and one based on polybutylene adipate terephthalate (PBAT), all associated with bioremediation agents. The efficiency of the bioassociation process was assessed through count methods and microscopy. The removal capacity of these systems was evaluated in synthetic liquid medium, both in the absence and in the presence of soybean (Glycine max L.) seedlings. The content of chromium and arsenic was also analyzed in aerial and hypogeous tissues of seedlings grown on contaminated solid substrate. PVA and PVA-magnetite biohybrid membranes showed the highest removal rates, between 57 and 75% of the initial arsenic content and more than 80% of the initial chromium content after 48h of treatment, when evaluated in synthetic liquid media with initial concentrations of 2.5ppm of pentavalent arsenic and 5ppm of hexavalent chromium, both in presence and absence of seedlings. PVA and PBAT promoted a significant reduction of arsenic translocation to the aerial parts, generally edible, of this crop of agronomic interest. The systems tested showed a high potential for biotechnological applications in matrices affected by the presence of arsenic and chromium.

Real-time acid production and extracellular matrix formation in mature biofilms of three Streptococcus mutans strains with special reference to xylitol

BackgroundAcidogenicity and production of an extracellular matrix (ECM) are important virulence factors for the dental caries-associated bacteria, such as Streptococcus mutans, that live in biofilms on tooth surface. The ECM protects the bacteria from the flushing and buffering effects of saliva resulting in highly acidic microenvironments inside the biofilm. Materials and methodsIn this in vitro study, we applied real-time assays to follow biofilm formation and pH decrease in a growth medium and saliva by three S. mutans strains, as well as acid neutralization inside the mature biofilm. Results were compared with the biofilm composition. Effects of a non-fermentable polyol, xylitol, on acid production and acid neutralization in mature biofilms were evaluated by real-time pH measurements and confocal microscopy. ResultsCombination of real-time pH measurements with biofilm accumulation assays revealed growth media dependent differences in the pH decrease and biofilm accumulation, as well as strain differences in acid production and biofilm formation but not in the buffer diffusion through ECM. The presence of xylitol reduced the pH drop during biofilm formation of all strains. In addition, with strain Ingbritt xylitol reduced the amount of ECM in biofilm, which increased the rate of acid neutralization inside the biofilm after buffer exposure. ConclusionOur results stress the importance of biofilm matrix in creating the acidic environment inside a S. mutans biofilm, especially in the presence of saliva. In addition, our results suggest a novel mechanism of xylitol action. The observed increase in the permeability of the S. mutans ECM after xylitol exposure may allow acid-neutralizing saliva to reach deeper layer of the biofilms and thus, in part, explain previous clinical observations of reduced plaque acidogenicity after frequent xylitol use.

Characterization of a High-Affinity Copper Transporter in the White-Nose Syndrome Causing Fungal Pathogen Pseudogymnoascus destructans.

Copper is an essential micronutrient and the ability to scavenge tightly bound or trace levels of copper ions at the host-pathogen interface is vital for fungal proliferation in animal hosts. Recent studies suggest that trace metal ion acquisition is critical for the establishment and propagation of Pseudogymnoascus destructans, the fungal pathogen responsible for white-nose syndrome (WNS), on their bat host. However, little is known about these metal acquisition pathways in P. destructans. In this study, we report the characterization of the P. destructans high-affinity copper transporter VC83_00191 (PdCTR1a), which is implicated as a virulence factor associated with the WNS disease state. Using Saccharomyces cerevisiae as a recombinant expression host, we find that PdCTR1a localizes to the cell surface plasma membrane and can efficiently traffic Cu-ions into the yeast cytoplasm. Complementary studies in the native P. destructans fungus provide evidence that PdCTR1a transcripts and protein levels are dictated by Cu-bioavailability in the growth media. Our study demonstrates that PdCTR1a is a functional high-affinity copper transporter and is relevant to Cu-homeostasis pathways in P. destructans.

Physicochemical and Fungal Analysis of a Hydrocarbon-Polluted Soil at Amadi-Ama Creek of Bonny River Port Harcourt, Rivers State, Nigeria

Numerous hydrocarbon-utilizing fungal species have been implicated with the ability to utilize/degrade hydrocarbon as carbon source, which indicate their potential for environmental cleanup in hydrocarbon-contaminated sites. In this study, five (5) indigenous fungal species were isolated from a petroleum-hydrocarbon polluted soil at Amadi-ama Creek, Bonny river shoreline, Port Harcourt, Rivers State. These fungal species may have high potential to biodegrade petroleum hydrocarbon pollutants. Samples were collected randomly from the hydrocarbon impacted soil at Amadi-ama Creek, Bonny river shoreline. Sabouraud’s Dextrose Agar (SDA) and Czapek Agar were used as growth media. Samples were examined to assess the physical and chemical characteristics such as conductivity, pH, temperature, nitrate, iron, copper, zinc, chromium, phosphate, sulphate, total hydrocarbon content, total petroleum hydrocarbon, and polycyclic aromatic hydrocarbon. These parameters are known to influence the occurrence, diversity and distribution of microorganisms in an ecological niche. Soil pH showed to be acidic (6.21), result also showed that Total hydrocarbon content, Total petroleum hydrocarbon and Polycyclic aromatic hydrocarbon values were at 306.55mg/kg, 112.134mg/kg, 44.227mg/kg respectively establishing the incidence of hydrocarbon pollution. Electrical conductivity and Temperature were at 1250 Us/cm, and 29.580C respectively while Nitrate, Phosphate, Sulphate, Iron, Copper, Zinc, and Chromium values were at 1.228mg/kg, 0.751mg/kg, 20.214mg/kg, 18.431mg/kg, 0.113mg/kg, 0.121mg/kg, and 0.042mg/kg respectively. Monitoring of the soil quality established the incidence of hydrocarbon pollution as well the incidence of anthropogenic influence on the soil putting into cognizance human activities at the shoreline. Morphological identification of obtained fungal species led to their assignment into four (4) genera and five (5) species; Aspergillus niger (28%), Aspergillus flavus (22%), Cladosporium herbarum (20%), Penicillium notatum (17%), Fusarium spp (11%). The predominance of Aspergillus isolates (28% and 22%) in this study could be a pointer to their potential to utilize hydrocarbon as their sole source of nutrient. The isolation of these indigenous fungal species could serve as a baseline study on which further analysis such as hydrocarbon degradation screening test could determine their individual hydrocarbon degradation potentials and subsequent consideration as hydrocarbon degrading microbes in subsequent bioremediation study.

Multicenter study of the performance of NTM Elite agar for the detection of nontuberculous mycobacteria from patients with cystic fibrosis.

The performance of a novel selective agar was evaluated against the performance of conventional mycobacterial cultures, i.e., a combination of the mycobacterial growth indicator tube (MGIT) with Löwenstein-Jensen (LJ), for the detection of nontuberculous mycobacteria (NTM) in sputum samples from people with cystic fibrosis (pwCF). Two hundred eighty-three sputum samples (231 fresh sputum and 52 spiked sputum) from 143 pwCF were collected. They were inoculated without prior decontamination on NTM Elite agar (30°C ± 2°C for 28 days) and inoculated on both MGIT and LJ (35°C-37°C for 6-8 weeks) after N-acetyl-L-cysteine-2% sodium hydroxide decontamination. NTM were identified by Matrix-Assisted Laser Desorption Ionization/Time of Flight Mass Spectrometry and/or PCR, and whole-genome sequencing. A total of 67 NTM were recovered overall by the combination of all culture media. NTM Elite agar allowed the recovery of 65 NTM (97%), compared to 22 for the conventional MGIT and LJ media combination (32.8%), including 22 NTM for MGIT (32.8%) and 3 NTM with the LJ medium (4.5%). For Mycobacterium abscessus complex, the sensitivity of NTM Elite agar was 95% compared with a sensitivity of 30% for the conventional MGIT and LJ media combination. Overall, 17.3% of cultures on NTM Elite agar were contaminated with other micro-organisms vs 46.3% on MGIT and 77% on LJ. This study shows that the novel selective agar (NTM Elite agar) significantly outperforms the conventional MGIT and LJ media combination in terms of sensitivity, selectivity, and ease of culture, without the requirement of an L3 laboratory.IMPORTANCENontuberculous mycobacteria (NTM) are significant pulmonary pathogens in patients with pre-existing structural lung conditions such as cystic fibrosis, bronchiectasis, or chronic obstructive pulmonary disease. Mycobacterium avium complex and Mycobacterium abscessus complex (MABSC) are the most frequently isolated organisms. Compared to the recommended culture method for NTM, which combines solid and liquid culture media, NTM Elite agar enables a faster/easier diagnosis and speeds up identification and susceptibility testing as the final reading is at 28 days instead of 6-8 weeks for the conventional mycobacterial cultures. In addition, for the NTM Elite agar, no decontamination stage before inoculation is necessary, unlike the conventional mycobacterial cultures. NTM Elite agar is derived from a formulation of medium adapted to rapidly growing mycobacteria (RGM). The medium enables the growth of RGM while suppressing other flora. It is supported with published clinical data showing the benefits of this medium.

Stepwise cell culture process intensification for high-productivity and cost-effective commercial manufacturing of a Mabcalin™ bispecifics

Process intensification and media optimization, as a crucial step for improving productivity and manufacturing cost of goods (COG), set the stage for commercialization readiness and redefine the landscape for patient access. This study described a stepwise approach to explore different intensified fed-batch processes along with optimized cell culture media for the production of a Mabcalin™ bispecifics. Initially, by leveraging perfusion expansion, intensified fed-batch (IFB) with an inoculation density of 10.3 × 106 cells/mL was developed to produce 6.1 g/L of products, compared to 3.9 g/L from the original traditional fed-batch (TFB). Following the IFB conversion, a high-performing production medium, MagniCHO™, was chosen to substitute the original one, which further boosted the titer to 9.1 g/L. The result underscored the significance of developing an optimized cell culture media for intensified cultivation. Furthermore, the approach of ultra-intensified intermittent-perfusion fed-batch was utilized, raising the seeding density to 73.6 × 106 cells/mL. A final harvest titer of 24.5 g/L was recorded. Additionally, manufacturing COG was calculated to evaluate how process intensification could lead to improved manufacturing cost-effectiveness, with up to 71 % COG reduction attainable with the UI-IPFB process. This study demonstrated that even for difficult-to-express modalities, applying a strategic development approach including process intensification and media optimization could effectively improve manufacturing efficiency and COG competitiveness.

Role of Copper Ions in Resistance of Modern Polymer Composite Materials to Fungal Damage

Resistance of polymer composite materials to biodamage is one of the pressing problems of our time. Incorporation of Cu2O (I) in the composition of a polymer composite based on the ED-20 epoxy resin increases its biocidal properties. Under conditions of mineral and organic contamination, the area of the samples affected by micromycetes was found to decrease with increasing concentration of dispersed particles in the composite. The affected area of the samples filled with the particles encapsulated in polylactide was 1.5 times smaller than that of the composites filled with non-encapsulated particles. Сopper oxide had a toxic effect on the Aspergillus niger strain dominant on the surface of the samples, causing a decrease in the average radial growth rate on the Czapek-Dox agar medium and in the biomass weight concentration during the growth of micromycetes in a liquid medium compared to the variant without Cu2O.