The author considers the requirements of the Decree of the President of Russia “On the Scientific and Technological Development Strategy of the Russian Federation” to the characteristics and principles of functioning of the public administration system in Russia. It is shown that the list of these characteristics and requirements is incomplete and insufficient for the implementation of the Decree. The main gaps in the requirements formed by the Decree relate to limiting the reconfiguration of the management system to only one subsystem, management in the field of scientific and technological development. The article argues that the complex nature of grand scientific and technological challenges implies profound changes in the public administration system as a whole, the transition from a structural and functional management system (a combination of meritocratic and client-oriented models) to a project management system (indicative and public-state models). The changes should affect the nomenclature and the scheme of interaction between structural divisions of state bodies, increase the level of project intra- and interdepartmental coordination. In addition, significant changes must be made in the public service system. We should organize training of specialists capable of using data analytics tools and data-based decision-making technologies as well as of carrying out an indicative assessment of project implementation indicators. The structure of the civil service should be associated with project offices and temporary performance of duties in these offices, and not only with permanent functions, taking into account the specifics of project service activities and project teams within government agencies. Civil servants should actively interact with independent expert structures and with civil society, which is the ultimate beneficiary of science and technology projects.