In this study, authors have proposed the autonomous state estimation which has been composed with IEC61850, GPS time synchronization and objective model design concept. The proposed method is able to supervise/correct measurement and communication error from SCADA. The major advantages of the proposed autonomous state estimation are that it is possible to evaluate integrity of data measured and transferred from SCADA, to reduce human intervention and to expense national-size applications such as EMS (Energy Management System), WAMS (Wide Area Monitoring System) or WAPS (Wide Area Protection System). This study addresses the issues related to the operation of the smart grid and proposes a new automated approach to achieve this goal. Through applying the proposed system to IEEE 14-bus test electric system, we prove the possibility of the proposed idea.