Two-dimensional layered-structure MoS2 has been explored as the promising cathode materials for magnesium ion batteries benefited by its wide layer distance and satisfactory capacity. However, such strong interaction between Mg2+ and MoS2 brings about the sluggish diffusion kinetics and irreversible electrochemical reaction, leading to a decreased specific capacity and poor rate capability. How to adopt its structure engineering and interface engineering to boost the Mg2+ diffusion kinetics and enhance the electrochemical reversibility of MoS2 is still a huge challenge. Herein, the amorphous sulfur-rich 1T/2H-MoS2 mesoporous nanospheres (a-MoS2+x, 0<x<1) have been developed via a facile one-pot hydrothermal route. Acted as a cathode material for magnesium ion batteries, owing to the cooperate effects of inherent rich active sites, high conductivity and wide layer distance induced by the coexistence of sulfur-rich, 1T phase and nearly amorphous features, the as-prepared a-MoS2+x demonstrates an ultra-high discharge capacity (438.7 mAh g−1 for 50 cycles at 0.1 A g−1), promising rate capability (97.6 mAh g−1 at 1.0 A g−1), and good cyclic stability (110 cycles at 0.5 A g−1), superior to the crystalline MoS2 (c-MoS2) and other previously reported MoS2 counterparts. Besides, the kinetics results indicate that the a-MoS2+x manifests good charge transfer and diffusion kinetics, and its entire charge storage is a combination of surface-controlled capacitance behavior and diffusion-controlled battery behavior. Moreover, some ex-situ Raman, XPS and HRTEM characterization techniques are employed to disclose the Mg2+ storage mechanism. Such remarkable magnesium storage properties of a-MoS2+x demonstrates its promising application as cathode for magnesium ion batteries.