Goat Population Research Articles

Genome-wide single nucleotide polymorphisms reveal the genetic diversity and population structure of Creole goats from northern Peru

Goat farming constitutes a significant source of income for farmers in northern Peru. There is currently an absence of information about the genetics of Peruvian Creole goats that would enable us to understand their origins and genetic spread. The objective of this study was to estimate the genetic diversity of Creole goats from northern Peru using SNP markers. This study involved the collection of 192 male Creole goats from three key goat production geographical departments in northern Peru. These goat samples were genotyped using the GGPGoat70k SNP panel. To explore the genetic influence of other breeds on Peruvian Creole goats, our dataset was combined with previously published SNP genotypes. External data set includes multiple breeds genotypes sampled from Argentina, Brazil, Spain, and Alpine breed from Italy, France, and Switzerland. After quality control 52,832 autosomal SNPs were used to assess genetic diversity in the Peruvian goats. For the population structure analysis of the merged data 20,513 common SNPs were used. Estimations for expected heterozygosity (He), observed heterozygosity (Ho), and inbreeding coefficient (FIS) were computed for the Peruvian groups. AMOVA, principal component analysis and ADMIXTURE were conducted to evaluate the population structure in the two data sets, Peru and merged. The results revealed a considerable genetic diversity, with Ho values ranging from 0.40 to 0.41 for the Peruvian sampling groups, and inbreeding coefficient was notably low for Peruvian goat. The population structure analysis demonstrated a distinction (p < 0.05) from other breeds. These findings suggest a level of genetic differentiation of the Peruvian goat population among other breeds, although further research is needed considering samples from other Peruvian areas. We expect this study will contribute to define genetic management strategies to prevent the loss of genetic diversity in Peruvian goat populations and for upcoming advancements in this field.

Whole genome characterization of Jaagsiekte Sheep Retrovirus isolated from OPA infected sheep (India) and structural assessment (In-silico) of proteins of JSRV

The study was conducted from 2017 to 2021 in sheep and goat population from Krishna, Guntur and Chittoor districts of Andhra Pradesh. A total of 1256 clinically unhealthy animals out of which 420 animals were manifested respiratory emaciated symptoms based on wheelbarrow test, all aged between 3 months to 4 years. Molecular diagnosis confirmed 38 samples out of 420 samples confirmed by wheelbarrow test. The prevalence rate of JSRV induced OPA is 3.02 % the less infection rate was observed in male as compared to females’ animals and this prevalence during the late winter seasons. The size of 7462 bp genome was sequenced from pathomorphological diversified animal lung sample. The genomic analysis reveals a total of 506 SNPs variants were recorded. The phylogenetic studies reveal, the isolated strain is very similar to South African strains but it diversified from UK and China strain. The structural and functional assessment studies based on derived amino acid sequence showed nonsignificant changes in 3D structures of proteins encoded by the JSRV genome. The substitution mutations both at Nucleotide and Amino acid sequence level suggest neutral evolution and they are under minimal evolutionary pressure.

Global and regional seroprevalence of coxiellosis in small ruminants: A systematic review and meta-analysis.

Coxiellosis is a neglected zoonosis for occupationally exposed people in many parts of the world. Sheep and goats are two important small ruminants that act as reservoirs for human contamination; however, there is a lack of comprehensive data on the epidemiological aspects of coxiellosis in sheep and goats at regional and global levels. The aim of this study was to systematically review the available articles on seroprevalence of coxiellosis in sheep and goats and estimate the overall seroprevalence in different regions. A systematic search strategy was performed in five electronic repositories for articles published until December 2021. Relevant data were extracted from the selected articles based on the inclusion criteria. A random effect meta-analysis model was used to analyse the data. Results are presented as the prevalence of seropositivity as a percentage and 95% confidence intervals. The global pooled seroprevalence of coxiellosis in sheep was 17.38% (95% confidence interval [CI]: 15.59%-19.17%). Overall, the regional level pooled prevalence estimates in sheep ranged from 15.04% (95% CI: 7.68%-22.40%) to 19.14% (95% CI: 15.51%-22.77%), depending on region. The global pooled seroprevalence of coxiellosis in goats was 22.60% (95% CI: 19.54%-25.66%). Overall, the regional level pooled prevalence estimates in goats ranged from 6.33% (95% CI: 2.96%-9.71%) to 55.13% (95% CI: 49.61%-60.65%), depending on the region. The prevalence estimates also varied significantly in both sheep and goats depending on age, sex, and rearing systems of the animals (p<0.001). Seroprevalence of coxiellosis in both sheep and goats is considerable. Routine monitoring of the sheep and goat populations is needed to prevent spillover infection in other livestock and humans.

MILK COMPOSITION OF THE CREOLE GOAT IN AN EXTENSIVE HUSBANDRY ENVIRONMENT IN A SEASONALLY DRY FOREST OF SOUTHERN ECUADOR

&lt;p&gt;&lt;strong&gt;Background. &lt;/strong&gt;The Creole goat (Chusca Lojana) is found in the tropical zone of the seasonally dry forest (SDF) in Loja province (southern Ecuador, South America), where 73 % of the nationwide goat population is located. &lt;strong&gt;Objective.&lt;/strong&gt; To study the productive characteristics and the milk quality of this population because this genetic resource represents a valuable socio-economic element for the habitants of this region. &lt;strong&gt;Methodology.&lt;/strong&gt; The production and milk quality of 198 goats, managed extensively and from different herds, were evaluated in four periodic visits, and production was recorded at the various stages of lactation, with milk samples taken for analysis using Lactoscan Milk Analyzer SA50. &lt;strong&gt;Results.&lt;/strong&gt; It was determined that 64 % of the goats have a globular udder, 93 % have pigmented nipples, the productive life curve increases in the third calving, reaches its peak in the fourth calving and then declines (R&lt;sup&gt;2 &lt;/sup&gt;= 0.82), lactation duration is 140 ± 20 days, the lactation curve follows a two-period mobile trend, showing two peaks, one higher (30 days) and another of less intensity between 120-150 days coinciding with the post-weaning period, and the mean daily production is 390 ± 231 ml. Production and composition of milk are not statistically affected by biotype. The milk composition of this goat presents 5.5 ± 1.9 % Fat, 8.2 ± 0.83 % NFS, 137 ± 2.1 % Total Solids, 4.5 ± 0.47 % Lactose, 3 ± 0.3 % Protein, 0.68 ± 0.07 % Mineral Salts, and pH 6.7 ± 0.26. &lt;strong&gt;Implication.&lt;/strong&gt; Analyze the productive performance and quality of the milk of this goat in semi-intensive management and using shrub resources present in abundance in this ecosystem (&lt;em&gt;Croton spp, Ipomea carnea&lt;/em&gt;), would help to improve management conditions and value this local zoogenetic resource. &lt;strong&gt;Conclusions.&lt;/strong&gt; With the information obtained from this study, those animals with a tendency to produce quality milk in this population can be standardized for selection, management, and multiplication.&lt;/p&gt;

Can Sustainability and Biodiversity Conservation Save Native Goat Breeds? The Situation in Campania Region (Southern Italy) between History and Regional Policy Interventions

The Campania region has a genetic heritage, both vegetal and animal, of great scientific interest, but many genetic resources risk extinction or abandonment. Thus, from a sustainability perspective, their conservation is very important and represents an imperative to allow future generations to satisfy their needs just as we are doing today. The aims of the present paper were to describe the current consistency and importance of goat farming in Italy and in the Campania region and to study its trend from 1861 to understand whether the policies for the sector implemented over time have been sufficient to conserve goat biodiversity. To these ends, the latest available data of the national livestock register of the Italian Ministry of Health, those of the different available Italian agricultural censuses, and historical–cultural documents published over time for the livestock sector were acquired and consulted to describe the goat sector and reconstruct its temporal trend. The results showed that in Italy there are just over 1,000,000 goats (the same consistency as 60 years ago), 50% of which are distributed in the southern regions, and 50,616 farms with goats, 43% of which are extensive. In this contest, the Campania region represents approximately 5% of the national goat population. The continuous decrease in the size of the national and regional goat heritage since the 1920s is the result of the agricultural policy instruments implemented for the livestock sector over time, which have effectively excluded the goat sector. Two small increases in the number of caprines were registered: the first in 1980s, when the Italian scientific community realized that the native goat genetic types, its milk and its organoleptic and dietary qualities could constitute a wealth of endogenous resources that needed to be valorized; the second, in the last decade, due to the actions of sustainability and biodiversity conservation implemented at the national and regional level. At the same time, today the goat sector continues to have a marginal role in the national and regional agricultural economy, and the survival of native goat farming is essentially ensured by sustainable rural communities conceived as the custodians of biodiversity.

Genetic diversity and population structure in five Inner Mongolia cashmere goat populations using whole-genome genotyping.

As a charismatic species, cashmere goats have rich genetic resources. In the Inner Mongolia Autonomous Region, there are three cashmere goat varieties named and approved by the state. These goats are renowned for their high cashmere production and superior cashmere quality. Therefore, it is vitally important to protect their genetic resources as they will serve as breeding material for developing new varieties in the future. Three breeds including Inner Mongolia cashmere goats (IMCG), Hanshan White cashmere goats (HS), and Ujimqin white cashmere goats (WZMQ) were studied. IMCG were of three types: Aerbas (AEBS), Erlangshan (ELS), and Alashan (ALS). Nine DNA samples were collected for each population, and they were genomically re-sequenced to obtain high-depth data. The genetic diversity parameters of each population were estimated to determine selection intensity. Principal component analysis, phylogenetic tree construction and genetic differentiation parameter estimation were performed to determine genetic relationships among populations. Samples from the 45 individuals from the five goat populations were sequenced, and 30,601,671 raw single nucleotide polymorphisms (SNPs) obtained. Then, variant calling was conducted using the reference genome, and 17,214,526 SNPs were retained after quality control. Individual sequencing depth of individuals ranged from 21.13× to 46.18×, with an average of 28.5×. In the AEBS, locus polymorphism (79.28) and expected heterozygosity (0.2554) proportions were the lowest, and the homologous consistency ratio (0.1021) and average inbreeding coefficient (0.1348) were the highest, indicating that this population had strong selection intensity. Conversely, ALS and WZMQ selection intensity was relatively low. Genetic distance between HS and the other four populations was relatively high, and genetic exchange existed among the other four populations. The Inner Mongolia cashmere goat (AEBS type) population has a relatively high selection intensity and a low genetic diversity. The IMCG (ALS type) and WZMQ populations had relatively low selection intensity and high genetic diversity. The genetic distance between HS and the other four populations was relatively high, with a moderate degree of differentiation. Overall, these genetic variations provide a solid foundation for resource identification of Inner Mongolia Autonomous Region cashmere goats in the future.

Exploring rumen fermentation and microbial populations in Dhofari goats fed a chitosan-added diet

The use of chitosan (CHI) in ruminant diets is a promising natural modifier for rumen fermentation, capable of modulating both the rumen pattern and microbial activities. The objective of this study was to explore the rumen fermentation and microbial populations in Dhofari goats fed a diet supplemented with CHI. A total of 24 Dhofari lactating goats (body weight, 27.32 ± 1.80 kg) were assigned randomly into three experimental groups (n = 8 ewes/group). Goats were fed a basal diet with either 0 (control), 180 (low), or 360 (high) mg CHI/kg of dietary dry matter (DM) for 45 days. Feeding high CHI linearly increased (p < 0.05) the propionate level and reduced the acetate, butyrate, and total protozoa count (p < 0.05). Ruminal ammonia nitrogen (NH3–N) concentrations and the acetate:propionate ratio decreased linearly when goats were fed CHI (p < 0.05). The abundances of both Spirochetes and Fibrobacteres phyla were reduced (p < 0.05) with both CHI doses relative to the control. Both low and high CHI reduced (p < 0.05) the relative abundances of Butyrivibrio hungatei, Fibrobacter succinogenes, Ruminococcus albus, Ruminococcus flavefaciens, Selenomonas ruminantium and Neocallimastix californiae populations. Adding CHI significantly decreased (p < 0.05) the abundances of Ascomycota, Basidiomycota, and Bacillariophyta phyla compared to the control. Adding CHI to the diet reduces the abundance of fibrolytic-degrading bacteria, however, it increases the amylolytic-degrading bacteria. Application of 360 mg of CHI/kg DM modified the relative populations of ruminal microbes, which could enhance the rumen fermentation patterns in Dhofari goats.

Seroprevalence and risk factors of Toxoplasma gondii infection in goats from South Punjab Province, Pakistan

Layyah District in South Punjab Province of Pakistan offers the most intensive caprine economy in the country; its Indus riverine and desert environment makes the area peculiar and worthy of specific investigations. This study aimed to investigate the prevalence of anti-Toxoplasma gondii (T. gondii) IgG-antibody in goats in serum samples and the potential risk factors. The prevalence of T. gondii infection was estimated using a two-stage sample design. All caprine farms in the study area were stratified by size, and from these 110 were randomly selected. Twelve goats (>1-year-old) were selected from each farm and a total of 1320 serum samples were collected and tested by ELISA. A questionnaire on the conditions and management practices of each farm was administered to 110 farmers. Four hundred and sixteen out of 1320 sera samples (31.5%) were found positive and 89% of the flock had at least one seropositive goat. The proportion of seropositive goats tested within each flock ranged from 8.3% to 83.3%. with several factors contributing to this heterogeneity. Goat age played a significant role in the presence of cats. Significant interactions were related to goat farms having floor of dirt and kitten presence. Moreover, age class, abortion history and water source supply were modulated by owner education levels. This is the first study to determine the prevalence of anti-T. gondii antibodies in goats sera in Layyah district and the largest carried out so far in Pakistan. The remarkable presence of T. gondii among goats in areas where goat farming plays a significant economic role may pose a production threat to the small-stock industry, as well as to public health and food safety. Therefore, investigations to identify high-risk goat populations are highly recommended in order to facilitate the implementation of local control strategies.

Genetic diversity, population structure and origin of the native goats in Central Laos.

Maintaining genetic diversity and variation in livestock populations is critical for natural and artificial selection promoting genetic improvement while avoiding problems due to inbreeding. In Laos, there are concerns that there has been a decline in genetic diversity and a rise in inbreeding among native goats in their village-based smallholder system. In this study, we investigated the genetic diversity of Lao native goats in Phin, Songkhone and Sepon districts in Central Laos for the first time using Illumina's Goat SNP50 BeadChip. We also explored the genetic relationships between Lao goats with 163 global goat populations from 36 countries. Our results revealled a close genetic relationship between Lao native goats and Chinese, Mongolian and Pakistani goats, sharing ancestries with Guangfen, Jining Grey and Luoping Yellow breeds (China) and Teddi goats (Pakistan). The observed (Ho) and expected (He) heterozygosity were 0.292 and 0.303 (Laos), 0.288 and 0.288 (Sepon), 0.299 and 0.308 (Phin) and 0.289 and 0.305 (Songkhone), respectively. There was low to moderate genetic differentiation (FST: 0.011-0.043) and negligible inbreeding coefficients (FIS: -0.001 to 0.052) between goat districts. The runs of homozygosity (ROH) had an average length of 5.92-6.85 Mb, with short ROH segments (1-5 Mb length) being the most prevalent (66.34%). Longer ROH segments (20-40 and >40 Mb length categories) were less common, comprising only 4.81% and 1.01%, respectively. Lao goats exhibit moderate genetic diversity, low-inbreeding levels and adequate effective population size. Some genetic distinctions between Lao goats may be explained by geographic and cultural features.

Assessing Environmental Effects upon Modeling the Individual Lactation Curve of a Local Goat Population in a Pastoral System.

The present study aims to use Wood's model to determine the parameters of individual lactation curves in a local goat population and their factors of variation under a pastoral system. A total of 137,927 records from 432 local goats were collected to assess the impact of litter size, year and month of kidding, herd and the age of the dam on lactation curve parameters. Wood's model parameters were estimated using non-linear regression, and individual curves were fitted. The characteristics of the lactation curves were computed. The initial yield (A), rate of increase (B) and rate of decline (C) parameters in Wood's model for local goats were 730 g, 0.26 and 0.09 respectively. The values of peak milk production (PP), peak date (PD) and persistency (PC) were 931.88 g/d, 23.39 days and 91.50%, respectively. Persistence was higher in goats with simple births, while peak production increased by around 0.3 kg for each additional kid. The curve parameters "A" and "C" differed according to the herd and month of kidding (p < 0.05); the age of the dam only had an impact on parameter "A" (p < 0.01). Parameter "B" was not significantly influenced by any of the factors considered (p > 0.05). Correlation coefficients among lactation curve characteristics were ranged from -0.20 to 0.89. Due to a significant negative correlation, selecting for parameter "A" may have an adverse effect on parameter "B", resulting in a shorter time to reach peak production and less persistency, but an increase in peak production among goats. The curves derived from Wood's model suggest that the shape of the curve may serve as a basis for herd management planning and to improve local population potentialities.

Antimicrobial Resistance Characteristics of Fecal Escherichia coli and Enterococcus Species in U.S. Goats: 2019 National Animal Health Monitoring System Enteric Study.

Escherichia coli and Enterococcus species are normal bacteria of the gastrointestinal tract and serve as indicator organisms for the epidemiology and emergence of antimicrobial resistance in their hosts and the environment. Some E. coli serovars, including E. coli O157:H7, are important human pathogens, although reservoir species such as goats remain asymptomatic. We describe the prevalence and antimicrobial resistance of generic E. coli, E. coli O157:H7, and Enterococcus species collected from a national surveillance study of goat feces as part of the National Animal Health Monitoring System (NAHMS) Goat 2019 study. Fecal samples were collected from 4918 goats on 332 operations across the United States. Expectedly, a high prevalence of E. coli (98.7%, 4850/4915) and Enterococcus species (94.8%, 4662/4918) was found. E. coli O157:H7 prevalence was low (0.2%; 10/4918). E. coli isolates, up to three per operation, were evaluated for antimicrobial susceptibility and 84.7% (571/674) were pansusceptible. Multidrug resistance (MDR; ≥3 classes) was uncommon among E. coli, occurring in 8.2% of isolates (55/674). Resistance toward seven antimicrobial classes was observed in a single isolate. Resistance to tetracycline alone (13.6%, 92/674) or to tetracycline, streptomycin, and sulfisoxazole (7.0% 47/674) was the most common pattern. All E. coli O157:H7 isolates were pansusceptible. Enterococcus isolates, up to four per operation, were prioritized by public health importance, including Enterococcus faecium and Enterococcus faecalis and evaluated. Resistance to lincomycin (93.8%, 1232/1313) was most common, with MDR detected in 29.5% (388/1313) of isolates. The combination of ciprofloxacin, lincomycin, and quinupristin resistance (27.1%, 105/388) was the most common pattern detected. Distribution and characteristics of antimicrobial resistance in E. coli and Enterococcus in the U.S. goat population from this study can inform stewardship considerations and public health efforts surrounding goats and their products.

Associations between Climate Variability and Livestock Production in Botswana: A Vector Autoregression with Exogenous Variables (VARX) Analysis

The changing climate has a serious bearing on agriculture, particularly livestock production in Botswana. Therefore, studying the relationship between climate and livestock, which at present is largely missing, is necessary for the proper formulation of government policy and interventions. This is critical in promoting the adoption of relevant mitigation strategies by farmers, thereby increasing resilience. The aim of this research is to establish associations between climate variability and livestock production in Botswana at the national level. The paper employs time series data from 1970 to 2020 and the Vector Autoregression with Exogenous Variables (VARX) model for statistical analysis. The trend shows that both cattle and goat populations are decreasing. The VARX model results reveal that cattle and goat populations are negatively associated with increasing maximum temperatures. Cattle respond negatively to increased minimum temperatures as well, while goats tend to respond positively, implying that livestock species react differently to climatic conditions due to their distinct features. The results of the roots of the companion matrix for cattle and goat production meet the stability condition as all the eigenvalues lie inside the unit circle. The study recommends further intervention by the government to deal with increasing temperatures, thereby addressing the dwindling populations of goats and cattle, which have significant contributions to the household economies of smallholders and the national economy, respectively.

КОЗЛЯТИНА: ПОЛЬЗА И ПОТЕНЦИАЛ

The purpose of research is to summarize and systematize data on the nutritional value of goat meat, benefits for human health and the potential for goat meat production. Objectives: to determine the benefits of goat meat as a source of dietary protein for human consumption; to explore the potential of goat meat production in the world. The study searched the electronic databases of Google Scholar, PubMed, ScienceDirec and Elibrary.ru, aimed at raising awareness about the goat population, emphasizing the advantages of goats over other farm animals, exploring the potential of goat meat production, as well as the benefits of goat meat for human consumption. To study the scientific literature on the problem, the method of comparative analysis was used. Goat meat is a good source of dietary protein for humans and has relatively low total fat, saturated fatty acids and cholesterol, making it a healthy food. The high concentration of iron in goat meat makes it possible to recommend this meat to pregnant women. The health-promoting chemical composition of meat meets consumer expectations for healthy eating, which explains its growing popularity and increased demand. Although goat meat is considered a lean red meat that is low in cholesterol and saturated fatty acids, some consumers mistakenly believe that goat meat is inferior in quality to beef, pork or lamb. This review aims to find evidence to support the favorable nutritional profile of goat meat and its health benefits. It is important to present goat meat as a unique product, emphasizing its na¬turalness and health benefits to consumers locally, regionally and internationally due to the animals being raised in natural conditions with very little use of pharmaceutical drugs. The hypoallergenic nature of goat meat suggests the prospects of its use in the production of baby food and as a resource in the meat industry in the production of gourmet meat products. Research is needed to improve the meat productivity of goats.

A Review on Current Scenario of Goat Population and Production in Rajasthan, India

The present assessment focuses on the goat industry in Rajasthan, with an emphasis on population and productivity. In India, the goat industry produces 1.21 million tons of goat meat (13.8%), 0.18 million tons of skins, and 6.26 million tons of milk (3%). Goats make up 50% of the total livestock population in Rajasthan and are the dominant species. As of 2019, there were 20.84 million goats in Rajasthan, which represents a 3.81% decrease from the previous census in 2012. Rajasthan produced a total of 3.10 million tons of goat milk and 95.23 thousand tons of goat meat in 2022-2023. The purpose of this review is to shed light on the current goat situation in Rajasthan and encourage entrepreneurship to establish more goat farms to improve the economic status of goat farmers in the region.

An Identification of Functional Genetic Variants in B4GALNT2 Gene and Their Association with Growth Traits in Goats.

β-1,4-N-acetylgalactosamine transferase 2 (B4GALNT2) is a vital candidate gene that affects the growth traits in sheep. However, whether it has the same function in goats remains to be investigated further. This study selected 348 Nanjiang Yellow goats, screened all exons, and conserved non-coding regions of the B4GALNT2 gene for single-nucleotide polymorphisms (SNPs). Our results revealed the presence of a synonymous mutation, rs672215506, within the exon of the B4GALNT2 gene in the Nanjiang Yellow goat population. The mutation resulted in a decrease in the mRNA stability of the B4GALNT2 gene. The results of SNP detection of the conserved non-coding region of the B4GALNT2 gene showed five potential regulatory SNPs in the Nanjiang Yellow goat population. Except for rs66095343, the ~500 bp fragments of the other four SNPs (rs649127714, rs649573228, rs652899012, and rs639183528) significantly increased the luciferase activity both in goat skeletal muscle satellite cells (MuSCs) and 293T cells. The genetic diversity indexes indicated low or intermediate levels for all six SNPs analyzed, and the genotype frequencies were in Hardy-Weinberg equilibrium. Association analysis showed that rs660965343, rs649127714, and rs649573228 significantly correlate with growth traits in the later stage of growth and development of Nanjiang Yellow goats. The haplotype combinations of H2H3 and H2H2 had higher body weight and greater body size. Moreover, H2H2 haplotype combinations significantly correlated with the litter size of the Nanjiang Yellow goats. The results of our study demonstrate the potential role of the B4GALNT2 gene as a functional genetic marker in the breeding programs of Nanjiang Yellow goats.

Animal husbandry market in Kazakhstan: Dynamics and prognosis

Studies of livestock dynamics and productivity is an effective mechanism to monitor the possible risks to the breeding of animals of different species and a timely response to strengthen the food security of the Republic of Kazakhstan. The research aims to conduct an analytical review of the state of livestock breeding on the main species of animals that are bred in its territory and the forecast of development soon. The materials for the analysis were reports from the Bureau of National Statistics of the Republic of Kazakhstan, as well as information in Kazakh and foreign periodicals on the state of livestock breeding and current news in the agricultural sector of the country. The statistical materials on the number of animals of different species, gross output received from them, investment activities, and other indicators directly or indirectly related to the dynamic indicators in animal husbandry were used. The results of the analytical review revealed positive annual dynamics of increasing the number of livestock of most species of farm animals in the country. Thus, the growth of cattle population is 2-4% from year to year, a similar situation is observed in sheep (2-4%) and poultry (4-10%); the only exception is a decrease in pig population by 5-9%. Populations of cattle, sheep and goats, horses, and camels are mainly concentrated in small farms and individual households, so a significant part of products from them does not get to industrial processing, which leads to the need to import them to meet the needs of the urban population. The main mass of poultry, although represented by the livestock of specialized agricultural enterprises, the volume of output does not provide the necessary volume, which is reflected in an increase in purchases abroad. Therefore, to date, there are no visible prerequisites for reducing the number of animals of all species that are bred in Kazakhstan, and the state support of livestock breeding can contribute to the further growth of livestock

Seroprevalence of peste des petits ruminants disease in Indonesian buffaloes may be an emerging threat to small ruminants

Background and Aim: The peste des petit ruminants (PPR) is a disaster-class virus that causes catastrophic drawbacks to small ruminant industries in affected countries. As PPR disease has been reported in neighboring countries, Indonesia, which has a large population of sheep and goats, has become prone to the emerging threat of infection. Because the virus can also infect other animals with subclinical manifestations, large ruminants, such as buffaloes, may play an important role in spreading the virus in the environment. Therefore, the main objective of this study was to identify PPR seroprevalence in the buffalo population of Indonesia. Materials and Methods: A competitive enzyme-linked immunosorbent assay was performed to identify the specific antibody for PPR viruses in the buffalo population using serum bank collection from the National Research and Innovation Agency, Indonesia. Results: PPR virus seroprevalence was detected in buffalo from Central Java, East Java, and East Nusa Tenggara Province in Indonesia. Although seroprevalence was low in the population, the antibody titer was relatively high in the positive samples. Sex and age were identified as determinant factors in the seroprevalence distribution of the buffalo population. Conclusion: The presence of antibodies against the PPR virus in buffaloes may indicate that PPR virus is circulating in the buffalo population of Indonesia. Keywords: antibody, buffalo, Indonesia, peste des petit ruminants, seroprevalence.

Runs of Homozygosity Detection and Selection Signature Analysis for Local Goat Breeds in Yunnan, China.

Runs of Homozygosity (ROH) are continuous homozygous DNA segments in diploid genomes, which have been used to estimate the genetic diversity, inbreeding levels, and genes associated with specific traits in livestock. In this study, we analyzed the resequencing data from 10 local goat breeds in Yunnan province of China and five additional goat populations obtained from a public database. The ROH analysis revealed 21,029 ROH segments across the 15 populations, with an average length of 1.27 Mb, a pattern of ROH, and the assessment of the inbreeding coefficient indicating genetic diversity and varying levels of inbreeding. iHS (integrated haplotype score) was used to analyze high-frequency Single-Nucleotide Polymorphisms (SNPs) in ROH regions, specific genes related to economic traits such as coat color and weight variation. These candidate genes include OCA2 (OCA2 melanosomal transmembrane protein) and MLPH (melanophilin) associated with coat color, EPHA6 (EPH receptor A6) involved in litter size, CDKAL1 (CDK5 regulatory subunit associated protein 1 like 1) and POMC (proopiomelanocortin) linked to weight variation and some putative genes associated with high-altitude adaptability and immune. This study uncovers genetic diversity and inbreeding levels within local goat breeds in Yunnan province, China. The identification of specific genes associated with economic traits and adaptability provides actionable insights for utilization and conservation efforts.

Diplotype-based assessment of GNRHR gene polymorphisms and their role in determining litter size at birth in the Malabari goat population of South India

The Gonadotropin Releasing Hormone Receptor (GNRHR) gene, a key regulator of the hypothalamo-pituitary-gonadal axis, plays a pivotal role in modulating reproductive potential in mammals by influencing the release of gonadotropins. In this study, we conducted a comprehensive population genetic analysis of haplotypes and diplotypes of the GNRHR and explored their association with litter size at birth in the prolific Malabari goat breed of South India. Utilizing PCR-single strand conformation polymorphism (SSCP) and PCR-sequencing-based typing (SBT) techniques, we genotyped 185 Malabari goats for diplotypes encompassing specific single nucleotide polymorphisms (SNPs) at c.–33A>G, c.–29 T>G, c.48 G>A, c.75 G>A, and c.209 T>G loci of the GNRHR gene. The PCR-SSCP and PCR-SBT revealed the presence of seven diplotypes and six haplotypes within the study population. Our results, as determined by ordinal logistic regression analysis, demonstrated a highly significant (p<0.01) influence of GNRHR diplotypes on litter size at birth up to the third parity, with a significant (p<0.05) effect observed in the fourth parity in Malabari goats. Specifically, the odds of multiple births were found to be 53.3% and 80.7% higher for AGAGG/ATGGT diplotypes compared to AGAGG/AGAGG diplotypes in the first and second parity, respectively. Furthermore, the odds ratio analysis highlighted a higher percentage of multiple births in AGAGG/AGAAG diplotypes during the third and fourth parities compared to other diplotypes in Malabari goats. Collectively, our findings suggest that heterozygote diplotypes confer a reproductive advantage over homozygous diplotypes for litter size at birth in the Malabari goat breed.

Reconstructing mountain goat history in the Olympic Mountains, USA

AbstractBetween 1925 and 1930, 11 or 12 non‐native mountain goats (Oreamnos americanus) were translocated from Alaska and British Columbia to the foothills of the Olympic Range. By 1970, descendants of these goats had colonized the entire range and concerns about the management of this introduced species developed as damage to alpine soil and vegetation occurred. A series of removals reduced the population from 1175 in 1983 to 389 by 1990, eventually growing to 584 in 2016. We used demographic and genetic data to parameterize a population genetics individual‐based simulation model of the Olympic Range mountain goats. We calibrated the model to replicate the population trajectory for Olympic mountain goats from establishment in the 1920s through the 1983 first census. As expected, modeled population dynamics from 1928 to 1983 mimicked parameter initialization from expanding populations. However, simulated heterozygosity did not align with observations, suggesting a process not accounted for within the simulation model, such as a bottleneck or founder effect. Sensitivity analyses showed changes in annual reproductive rate, juvenile mortality, and adult female mortality influencing population trajectories, but variation in male mortality revealed no changes. Evaluating the population dynamics of the model after removals showed that approximately 80% of the total animals removed during the 1980s needed to be female in order for the observed population estimates to occur. This model has the potential to be used more widely with established or introduced mountain goat populations, as well as to provide an approach for studying other introduced species and their population dynamics.