Genera In Biofilms Research Articles

A step closer to real practice: Integrated tandem photocatalysis-biofilm process towards degradation of crude oil

Intimately coupled photocatalysis and biodegradation (ICPB) systems represent a promising wastewater treatment technology. The implementation of ICPB systems for oil spill treatment is a pressing concern. In this study, we developed an ICPB system comprising BiOBr/modified g-C3N4 (M-CN) and biofilms for the treatment of oil spills. The results demonstrate that the ICPB system achieved the rapid degradation of crude oil, outperforming the single photocatalysis and biodegradation methods by degrading 89.08 ± 5.36% within 48 h. The combination of BiOBr and M-CN formed a Z-scheme heterojunction structure, enhancing the redox capacity. The interaction between the holes (h+) and the negative charge on the biofilm surface promoted the separation of electrons (e−) and h+, thereby accelerating the degradation process of crude oil. Moreover, ICPB system maintained an excellent degradation ratio after three cycles and its biofilms progressively adapted to the adverse effects of crude oil and light. The microbial community structure remained stable throughout the degradation of crude oil, with Acinetobacter and Sphingobium identified as the dominant genera in biofilms. The proliferation of the Acinetobacter genus appeared to be the main factor contributing to the promotion of crude oil degradation. Our work demonstrates that the integrated tandem strategies perhaps represent a feasible pathway toward practical crude oil degradation.

A novel two-stage anoxic/oxic-moving bed biofilm reactor process for biological nitrogen removal in a full-scale municipal WWTP: Performance and bacterial community analysis

The application of a novel two-stage anoxic/oxic-moving bed biofilm reactor (TS-A/O-MBBR) was validated in a full-scale municipal wastewater treatment plant (WWTP), and its working mechanism was analysed for biological nitrogen removal in this study. Over one year, at a hydraulic residence time of only 9.8 h, the effluent chemical oxygen demand, ammonia nitrogen and total nitrogen (TN) concentrations remained below 40, 2 and 15 mg/L, which met strict emission standards. The seven compartments in this unit performed different functions, and together accomplished organics and nitrogen removal. TN removal could be controlled by the external carbon sources dosage added to the postanoxic compartments to cost effectively meet the standard with the lowest cost. The maximum TN removal efficiency and minimum effluent TN concentration reached 91.76 % and 4.12 mg/L, respectively. The bacterial communities differed in the suspended solids and preoxic, postanoxic and oxic biofilms (r = 0.87 and P = 0.001). The top 30 most abundant identified bacterial genera in biofilms included 24 denitrifying genera and 2 nitrifying genera. The most abundant biofilm genus was Methylotenera, which played important roles in denitrification in the anoxic compartments. 1 and 24 denitrifying genera were only abundant in the postanoxic and preanoxic compartments, respectively. Nitrosomonas and Nitrospira were abundant in the oxic compartments, and played roles in nitrification. This study verified the feasibility of the TS-A/O-MBBR process in a full-scale WWTP, and investigated its working mechanism.

Pre-electrochemical treatment combined with fixed bed biofilm reactor for pyridine wastewater treatment: From performance to microbial community analysis

To overcome the high biotoxicity and poor biodegradability of pyridine and its derivatives, a pre-electrochemical treatment combined with fixed bed biofilm reactor (EC-FBBR) was designed for multi-component stream including pyridine (Pyr), 3-cyanopyridine (3-CNPyr), and 3-chloropyridine (3-ClPyr). The EC-FBBR system could simultaneously degrade these pollutants with a mineralization efficiency of 90%, especially for the persistent 3-ClPyr. Specifically, the EC could partially degrade all pollutants, and allow them to be completely destructed in FBBR. With EC off, Rhodococcus (35.5%) became the most abundant genus in biofilm, probably due to its high tolerance to 3-ClPyr. With EC on, 3-ClPyr was reduced to an acceptable level, thus Paracoccus (21.1%) outcompeted among interspecies competition with Rhodococcus and became the dominant genus. Paracoccus was considered to participate in the subsequent degradation for the residual 3-ClPyr, and led to the complete destruction for all pollutants. This study proposed promising combination for effective treatment of multi-component pyridine wastewater.

THMs, HAAs and NAs production from culturable microorganisms in pipeline network by ozonation, chlorination, chloramination and joint disinfection strategies

Disinfection is an indispensable process to inactivate pathogens, while unexpected disinfection by-products (DBPs) would also be formed between the reaction of residual disinfectants and microorganisms in the water distribution system (WDS). However, there are few studies referring to the formation of DBPs and DBPs-associated toxicity under various disinfection methods based on microorganisms in the real WDS. In addition, the main contributors of bacterial communities or components that generate DBPs are unclear. In this study, the formation of trihalomethanes (THMs), halo-acetic acids (HAAs), nitrosamines (NAs) from culturable microorganisms in pipeline network by ozonation(O3), chlorination (Cl2), chloramination (NH2Cl) and joint disinfection methods were compared, meanwhile, their calculated toxicities under different oxidation scenarios were also discussed. Moreover, 16S ribosomal ribonucleic acid (rRNA) gene sequencing was used to identify the main microbial communities. The results demonstrated that THMs and HAAs increased with increasing disinfectant dosages, while the quantity of NAs (mainly nitroso dimethylamine (NDMA)) was not significantly related to disinfectant dosages for each disinfection strategy. Chloroform (TCM) and dichloroacetic acid (DCAA) were the dominant THMs and HAAs species, respectively. NDMA existed in the samples before disinfections, which may due to the metabolic activity of microorganisms. Pre-O3 increased THMs formation during subsequent Cl2 and NH2Cl treatment. However, pre-O3 effectively reduced HAAs produced by subsequent chlorination. O3/Cl2 disinfection had the highest DBPs formation potential (DBPFP) (883.6 nM), while its calculated toxicity was similar to that in Cl2 disinfection treatment. Pseudomonas was the most abundant bacterial genus in biofilm of WDS pipeline. This study can aid in an optimal disinfection strategy for water treatment plants to reduce the toxicity of DBPs caused by biomass in pipelines and ensure water quality safety.

Deciphering the succession dynamics of dominant and rare genera in biofilm development process

Deciphering the succession dynamics of dominant and rare taxa is crucial to understand the stability and ecosystem functions of biofilm communities. However, the essential laws of the succession dynamics based on dominant and rare taxa were still unenlightened. Herein, we investigated the succession dynamics of dominant and rare genera in multi-species biofilms developed in flow cells fed with 10 and 40 mg-TOC/L LB broth. The relative abundance of dominant genera (Enterobacteria and Acinetobacter) decreased remarkably (from 94.63% to 73.22%) in 10 mg-TOC/L LB broth, whereas they kept relatively steady (93.75 ± 4.23%) along with the cultivation time in 40 mg-TOC/L LB broth. Fluorescence in situ hybridization showed that rare genera tended to form clusters at both concentrations, while weaker dispersal of dominant genera caused patchier biofilm structures in 10 mg-TOC/L LB broth compared to that in 40 mg-TOC/L LB broth. Null model analyses further demonstrated that the stochastic ecological drift was more pronounced in the community assembly of biofilms in 10 mg-TOC/L LB broth (73.33%) than those in 40 mg-TOC/L LB broth (60.95%), weakening the competitive superiority of dominant taxa in the patchier biofilms. In addition, the co-occurrence network reflected that the positive interactions among rare genera contributed to exclude dominant genera in 10 mg-TOC/L LB broth, whereas negative interactions only occurred between the dominant Enterobacter and Acinetobacter or rare Comamonas in 40 mg-TOC/L LB broth. This study highlighted the distinctive succession dynamics of dominant and rare genera in biofilms at different substrate concentrations, which would advance our understanding of the biofilm communities in biofilm-related process.

Impact of disinfectant on bacterial antibiotic resistance transfer between biofilm and tap water in a simulated distribution network

Bacterial antibiotic resistance (BAR) is profoundly important to human health, but the environmental reservoirs of resistance determinants are poorly understood. BAR of biofilm and tap water were analyzed by using a water distribution simulator where different doses of chlorine and chloramine were used in this study. The results revealed that the disinfectants (≥2 mg/L) suppressed antibiotic resistant bacteria (ARB) in tap water and biofilms, while disinfected water and biofilms had a high relative abundance of ARB. The difference of ARB concentration and ARB percentage between the samples obtained from a disinfected pipeline and a non-disinfected pipeline became smaller over time. Because the water supply system is a unidirectional process, it is unclear how planktonic bacteria in water transfer BAR over time, although biofilm is suspected to play a role in this process. Compared with the biofilm samples without disinfectant, the disinfected biofilm had lower ICC and HPC/ICC percentage, lower AOC and AOC/TOC percentage, indicating that the disinfectant inhibited the bacteria growth in biofilm, and the disinfected biofilm had high proportion of non-culturable bacteria and low biodegradability, which affected BAR in biofilms. High throughput sequencing showed that in biofilms, the relative abundance of genera (uncultured_f_Rhodocyclaceae, Brevundimonas, and Brevibacillus in chlorinated systems, and Brevundimonas, Brevibacillus in chloraminated systems) with multiple antibiotic resistance and high abundance (up to 78.5%), were positively associated with disinfectant concentration and ARB percentage. The major prevalent genera in biofilms were also detected in tap water, suggesting that biofilm growth or biofilm detachment caused by external environmental factors will allow the movement of biofilm clusters with higher ARB concentration and percentage into bulk water, thereby increasing the antibiotic resistance of bacteria in tap water.

Impacts of different morphologies of anammox bacteria on nitrogen removal performance of a hybrid bioreactor: Suspended sludge, biofilm and gel beads

The difficulties in the anaerobic ammonium oxidation (anammox) process mainly consist of low microbial growth rates and long start-up times of bioreactors. The morphologies of anammox bacteria might affect nitrogen removal performance and microbial community. In this study, three morphologies of anammox bacteria, namely, suspended sludge, biofilm and suspended sludge embedded in gel beads, were compared in a hybrid bioreactor under anoxic conditions (DO concentration < 0.1 mg L−1). The results show that the average total inorganic nitrogen removal efficiency of a hybrid bioreactor reached 67 ± 15% with a maximum value of 80% for continuous synthetic wastewater feeding, and that the specific total inorganic nitrogen removal rate reached 15.75 mg·(gVSS·h)−1 regardless of the organic matter stress. Batch tests indicate that mainly suspended sludge (67%) and biofilm (26%) contributed to the anammox process, with the specific total inorganic nitrogen removal rate reaching 10.55 and 4.05 mg·(gVSS·h)−1, respectively. However, the embedding of sludge in gel resulted in nitrification instead of anammox with a nitrification rate of 0.20 ± 0.01 mg·(L·h)−1 due to the expansion of gel beads floating on the water surface. Therefore, a pore-forming technique was developed to produce more channels for gas dispersion inside the gel beads. In terms of microbial community, Candidatus Kuenenia involved in the anammox group was the most abundant genus in biofilm (43.4%) and suspended sludge (15.7%), while Nitrospira occupied the largest proportion in gel beads (25.6%). This study offers useful information for the selection of anammox bacteria morphology.

Hydrophobicity of diverse bacterial populations in activated sludge and biofilm revealed by microbial adhesion to hydrocarbons assay and high-throughput sequencing

Cell hydrophobicity is one of the key physicochemical properties of bacteria in activated sludge (AS) and biofilms can influence the efficient operation of wastewater treatment plants (WWTPs). In the present study the cell hydrophobicity of diverse bacterial populations in AS and biofilms from the Shatin and Stanley WWTPs of Hong Kong was characterized by combining the microbial adhesion to hydrocarbons (MATH) assay with the Illumina high-throughput sequencing. The results indicated that, at the phylum level, a majority of bacteria in AS and biofilms showed medium hydrophobicity. Most of the top 20 bacterial genera in the AS samples were hydrophilic. However, the top 20 genera in biofilms showed higher hydrophobicity than in the top 20 genera in AS samples, suggesting more hydrophobic bacteria existed in biofilms than in AS. Meanwhile, the hydrophobicity of two specific bacterial groups, including foaming and biosurfactant-producing bacteria, were also evaluated. The results demonstrated that, by combining the MATH assay with the Illumina sequencing approach, bacterial hydrophobicity could be evaluated with high efficiency and coverage in complex systems with high microbial diversity, e.g. AS and biofilms in WWTPs.