The finger citron (Citrus medica L.var. sarcodactylis Swingle) is a both medicinal and edible species specified by the China Ministry of Health, It is also a regional medicinal plant grown in Chinaʼs Chongqing Municipality. We explored the utilization value of flower, leaf, and branch resources of non-medicinal sections of finger citron of Chongqing origin and identified variations in its yield, content, and antioxidant activity in essential oils in several organs. From several finger citron organs, essential oils were extracted using ultrasonic-assisted steam distillation, and their essential components were identified using gas chromatography-mass spectrometry (GC–MS). To assess antioxidant properties of various finger citron organs, DPPH free radical scavenging rate, ABTS free radical scavenging rate, and total reducing power of essential oils were determined. A total of 71 chemical components were discovered, and a cluster heat map revealed that d-limonene, Citral, (Z)-3,7-dimethylocta-2,6-dienal, γ-Terpinene, OCymene, and Ocimene were the most significant components and that their composition and concentration in essential oils of different organs varied substantially, with the average total amount in the four major organs in descending order: branches (79.34 %), leaves (73.40 %), flowers (68.85 %), and dried fruits (55.69 %). Finger citron's non-medicinal sections and organs' essential oils exhibited some level of antioxidant activity. The maximal clearance rate of the final flower group was 19.26 % when the essential oil concentration of each group was 4.0 mg·mL−1 for the assessment of DPPH free radical scavenging activity. DPPH free radical clearance rates of the bud group, initial flower group, full flower group, final flower group, branch group, and young leaf group were significantly different from the medicinal parts dried fruits group (P < 0.05), whereas there was no significant difference in the old leaf group (P > 0.05). When the essential oil concentration of each group was 0.10 mg·mL−1 for the ABTS radical scavenging ability measurement, the bud group had the highest scavenging rate of 32.24 %, and significant differences in the ABTS radical scavenging rates of the bud group, primary flower group, full flower group, final flower group, and branch group were observed when compared to the dried fruits group (P < 0.05). Between the young leaf and old leaf groups, there was no significant difference (P > 0.05). When the essential oil concentration was 3.0 mg·mL−1 for the measurement of overall reduction capacity, the old leaf group's highest absorbance value was 0.310. and the total reduction capacity of the bud group, first flower group, complete flower group, last flower group, branch group, young leaf group, and old leaf group substantially differed from the dried fruits (P < 0.05). This study provides a reference for the formation of “green” concurrent consumption and development of medicinal and non-medicinal elements of Chinese medicinal materials as well as theoretical support for the diverse utilization of finger citron resources.