Free-grazing Ducks Research Articles

Heavy metal contamination in eggs on poultry farms and ecological risk assessment around a gold mine area in northern Thailand

The aim of this study was to analyze and compare the Hg, Pb, Cd, and Mn levels in egg feed, soil, and water among laying hens, laying ducks, and free-grazing duck farms in contaminated and uncontaminated areas. This study revealed that the Hg concentration in the eggs of free-grazing ducks was significantly greater than that in the eggs of laying hens and ducks in both contaminated and uncontaminated areas. However, the Pb and Mn levels in the eggs of laying ducks and free-grazing ducks were significantly greater than those in the eggs of laying hens in the contaminated area. Unfortunately, the Hg, Pb, Cd, and Mn concentrations in the feed, soil, and water from these three farms in both areas were not significantly different (P > 0.05). Hg and Cd were confirmed to be enriched in the egg albumin fraction, while Pb and Mn were found mainly in the egg yolk. However, egg consumption from free-grazing duck farms was the riskiest to Hg, Pb, and Mn contamination in the contaminated area. Additionally, the ecological risk factor (ER) in the soil revealed that all the farms were at considerable to high environmental risk for Cd except for Hg and Pb. Although the potential ecological risk index (RI) indicated a moderate risk for all farms in both contaminated and uncontaminated areas, these results were not consistent with our hypothesis. Therefore, the information gained in this study could be useful for setting up mitigation strategies and making decisions about public health concerns related to health hazards, especially for ecological risk assessments of heavy metal contamination.

Genetic characterization of low-pathogenic avian influenza subtypes H10N6 and H10N7 from free-grazing ducks in Thailand.

Free-grazing duck (FGD) raising is a unique domestic duck production system that is widely practiced in several Asian countries, including Thailand. FGD is a significant reservoir for influenza A viruses (IAVs). In this study, we genetically characterized IAV-H10N6 and IAV-H10N7 isolated from avian influenza surveillance in FGDs in Thailand. We collected 640 swab samples from 29 FGD flocks located in 6 provinces of Thailand. IAVs were isolated from swab samples using egg inoculation. Hemagglutination test-positive samples were then subjected to IAV detection. Viral RNA was subjected to IAV detection using real-time reverse-transcription polymerase chain reaction (rRT-PCR) specific to matrix (M) gene. IAV subtypes were identified using the RT-PCR assay specific to all hemagglutinin and neuraminidase subtypes. Whole-genome sequencing of IAVs was performed to genetically characterize IAV-H10N6 and IAV-H10N7. Our results showed that 41 (6.41%) samples tested positive for IAV using rRT-PCR specific to the M gene. Among these, only two IAVs were subtypes as IAV-H10N6 and IAV-H10N7 and were subjected to whole-genome sequencing. IAV-H10N6 and IAV-H10N7 belonged to the Eurasian lineage and did not show any evidence of reassortment from the North American lineage. The viruses exhibited low-pathogenic characteristics and preferred binding to avian-type receptors. Genetic analysis revealed no mutations in PB2 and M genes, unlike human IAV-H10N3 and IAV-H10N8, which exhibited increased virulence in mammals. IAV-H10N6 and IAV-H10N7 viruses have less potential as zoonotic viruses. However, IAV in FGDs should be monitored for novel reassortant or zoonotic viruses. This study provides information on the genetic characteristics and diversity of IAV-H10N6 and IAV-H10N7 that are circulated in FGDs in Thailand.

Serological Detection of Toxoplasma gondii among Free-Grazing Ducks from Central and Western Thailand-A One Health Perspective on Integrated Farming.

Toxoplasmosis is one of the most common zoonotic parasitic diseases infecting nearly all warm-blooded animals, including poultry (geese, turkeys, chickens, and ducks). It is caused by Toxoplasma gondii (T. gondii), which is an obligate intracellular protozoan belonging to the Apicomplexa group. In Thailand, duck meat production for domestic consumption and international trade is mainly bred and produced in the central and western parts of the country. Free-grazing ducks in integrated duck-rice production have significant benefits in rice cultivation, accounting for the popularity of this farming system in Thailand. However, ducks are considered particularly susceptible to consuming T. gondii oocysts from water contaminated with cat feces due to the fact of their feeding habits of free-grazing and dabbling. Hence, the prevalence of this zoonotic parasite in a large-scale integrated farming context is particularly challenging with respect to the contamination of the food chain of humans and farm animals. In the present study, we examined the overall prevalence of T. gondii infection in slaughtered free-grazing ducks originating from Central and Western Thailand, setting the stage for an in-depth One Health approach to assess and manage the risks of integrated farming practices. A representative sample size of 161 ducks was calculated using a two-stage sampling method. Specifically, serum samples were collected from 217 slaughtered free-grazing ducks originating in six provinces in Central and Western Thailand. Serum antibodies against T. gondii were detected using an indirect fluorescent antibody test (IFAT). The positive control serum samples were prepared from ducks experimentally immunized with T. gondii. Sixty-eight (31.3%) of the two hundred and seventeen ducks were seropositive with T. gondii. Two groups of fattening ducks and spent layers showed similar seropositivity rates at 29% and 32.3%, with the majority of positive samples being found in the low titer. In addition, a wide distribution of positive serum samples was observed in all six provinces in the present study. To the best of our knowledge, this is the first report on a serological prevalence snapshot in commercially produced duck populations that have high interaction with farmed environments in Thailand, revealing a high infection pressure in areas of integrated duck-rice farming. Importantly, contaminated duck meat for commercial use, as well as offal and carcasses from slaughterhouses, completes the transmission of T. gondii from the environment into the food chain of humans and domestic animals. Hence, from a One Health perspective, it is important to clarify whether this transmission chain extends further to the wild, i.e., predator-prey cycles that are independent of duck farming or are self-contained.

Molecular surveillance of avian influenza A (H5N6) virus in Quangbinh province, Vietnam

The haemagglutinin (HA) gene of highly pathogenic (HP) avian influenza H5Nx viruses (AIVs) has undergone continuous evolution, generating emerging reassorted subtypes and clades. Vietnam has been experiencing HPAI outbreaks since 2003, H5N1 and H5N6 virus infections resulted in culling millions of poultry. This paper presents the results of an active AIVs surveillance in domestic poultry, free-grazing domestic ducks and wild waterfowl in QuangBinh province, Vietnam from September 2015 through March 2018. A total of 452 pool cloacal swabs were analysed by real-time RT-PCR (rRT-PCR). The positive rates of the H5 subtype AIVs were 1.8% of chickens, 5.7% of ducks, and 11.1% of wild birds. Most of H5N6 AIVs were identified from apparently healthy domestic ducks and wild waterfowl (grey heron). Molecular analysis of ten H5N6 AIVs detected in 2016-2018 showed that these viruses have the basic amino acid motif at the HA1-HA2 cleavage site associated with HPAIV and belonged to the clade 2.3.4.4.c. H5N6 HPAI detected in wild waterfowl determined the possibility of virus transmission between wild and free-grazing domestic ducks in QuangBinh. This type of study is very novel in QuangBinh province. Surveillance in wild and domestic birds should be implemented for early detection of the virus and efficient control of its spread in this area.

Potential Health Effects of Heavy Metals and Carcinogenic Health Risk Estimation of Pb and Cd Contaminated Eggs from a Closed Gold Mine Area in Northern Thailand.

Gold-mining activities have been demonstrated to result in significant environmental pollution by Hg, Pb, and Mn, causing serious concerns regarding the potential threat to the public health of neighboring populations around the world. The present study focused on heavy-metal contamination in the eggs, blood, feed, soil, and drinking water on chicken farms, duck farms, and free-grazing duck farms located in areas <25 km and >25 km away from a gold mine in northern Thailand. In an area <25 km away, Hg, Pb, and Mn concentrations in the eggs of free-grazing ducks were significantly higher than >25 km away (p < 0.05). In blood, Hg concentration in free-grazing ducks was also significantly higher than those in an area >25 km away (p < 0.05). Furthermore, the Pb concentration in the blood of farm ducks was significantly higher than in an area >25 km away (p < 0.05). The concentration of Cd in drinking water on chicken farms was significantly higher for farms located within 25 km of the gold mine (p < 0.05). Furthermore, a high correlation was shown between the Pb (r2 = 0.84) and Cd (r2 = 0.42) found between drinking water and blood in free-grazing ducks in the area <25 km away. Therefore, health risk from heavy-metal contamination was inevitably avoided in free-grazing activity near the gold mine. The incremental lifetime cancer risk (ILCR) in the population of both Pb and Cd exceeded the cancer limit (10−4) for all age groups in both areas, which was particularly high in the area <25 km for chicken-egg consumption, especially among people aged 13–18 and 18–35 years old. Based on these findings, long-term surveillance regarding human and animal health risk must be strictly operated through food chains and an appropriate control plan for poultry businesses roaming around the gold mine.

Genetic characterization of influenza A virus subtypes H11N6, H11N7, and H11N9 isolated from free-grazing ducks, Thailand.

Influenza A viruses (IAVs) infect avian species and several mammalian species including humans. Anseriformes water birds are an important reservoir of IAVs. In this study, we identified and characterized IAV subtypes H11N6 (n = 5), H11N7 (n = 3), and H11N9 (n = 3) isolated during the influenza surveillance program in free‐grazing ducks from 2012 to 2015 in Thailand. Eleven IAV‐H11 viruses were characterized by either whole genome sequencing (n = 5) or HA and NA gene sequencing (n = 6) for phylogenetic and amino acid analyses. Phylogenetic analysis showed that Thai IAV‐H11 were grouped into Avian Eurasian lineage. Amino acid analysis showed that all Thai IAV‐H11 viruses have low pathogenic avian influenza (LPAI) characteristics and sensitive to Oseltamivir and Amantadine. Novel reassortant viruses (IAV‐H11N7 and IAV‐H11N9) have been observed. The reassortant viruses contained NP, M, and NS gene segments which originate from intercontinental sources which never been reported in Thai IAVs. In summary, this study demonstrated high genetic diversity of IAV‐H11 circulating in free‐grazing ducks. Free‐grazing ducks infected with IAVs generated novel reassortant IAV‐H11. Thus, surveillance of IAVs in free‐grazing ducks should be routinely conducted to monitor novel reassortant viruses and subsequently potential virulence viruses.

Health significant alarms of toxic carcinogenic risk consumption of blood meal metals contamination in poultry at a gold mining neighborhood, northern Thailand.

The proposes of this study were to compare THg (total mercury), Pb(Lead), Cd(Cadmium), and Mn (Manganese) contamination in poultry blood between polluted areas (≤ 25km) and unpolluted areas (> 25km) adjacent to the largest gold mining in northern Thailand. The THg level in the free-grazing duck in polluted areas was significantly higher than unpolluted area. Both THg and Pb levels in free-grazing duck were also highest in polluted areas. In contrast, the level of (Mn) in chicken blood was the highest in polluted areas. Cadmium in farmed duck from polluted areas was significantly higher than unpolluted areas. The target hazard quotient (THQ) and hazard index (HI) of Hg, Pb, Cd, and Mn in all age groups in both areas did not exceed 1, meaning there is no possibility of the non-carcinogenic toxicity.Whereas, the incremental lifetime cancer risk (ILCR) of both Pb and Cd exceeded 1 × 10-4 in all age groups andthese were particularly higher in the polluted area and considered to yield significant health effects of increasingthe cancer risk. The ILCR in descending order for Pb and Cd was 13-18years old = 18-35years old > 6-13years old = 35-65years old > 3-6years old > 65 up years old, respectively. The results revealed that the human cancer risk related to consuming poultry blood contaminated with both Pb and Cd in all age groups must be of concern, especially 13-18 and 18-35years, it must be recommended to avoid raising animals in contaminated areas, especially free-grazing duck.

Patterns of duck Tembusu virus infection in ducks, Thailand: a serological study

Duck Tembusu virus (DTMUV), a mosquito-borne flavivirus, has been identified as a causative agent of an emerging viral disease in ducks, causing significant economic losses to the duck-producing industry. In Thailand, DTMUV has been detected sporadically in ducks since the first report in 2013. However, information on the patterns of DTMUV infection in ducks in Thailand is limited. In this study, a serological survey of DTMUV on ducks raised in farming and free-grazing systems was conducted during 2015-2016. Blood samples of farm ducks (n = 160) and free-grazing ducks (n = 240) were collected in the summer, rainy, and winter seasons during 2015-2016 and tested for DTMUV infection. Our results showed that DTMUV infection in ducks in Thailand occurred all year-round; however, the patterns of DTMUV infection varied between 2 duck-raising systems. Significant seasonal pattern was found in free-grazing ducks, whereas no seasonality was observed in farm ducks. Notably, DTMUV infection in ducks in Thailand was highest in the winter season. In conclusion, our data indicate distinct patterns of DTMUV infection between farm and free-grazing ducks, and the year-round circulation of DTMUV in ducks in Thailand, with peaks in the winter season. This information will help reduce the risk of DTMUV transmission through prevention and control strategies focusing on the peak period. Routine surveillance of DTMUV in ducks is essential for early detection of DTMUV allowing the implementation of control measures in a timely manner.

Phylogeographic analysis of H5N1 highly pathogenic avian influenza virus isolated in Cambodia from 2018 to 2019.

Since 2004, several outbreaks of highly pathogenic avian influenza (HPAI) have been reported in Cambodia. Until 2013, all H5N1 viruses identified in Cambodia belonged to clade 1 and its subclades. H5N1 HPAI viruses belonging to clade 2.3.2.1c have been dominant since the beginning of 2014, with various genotypes (KH1-KH5) reported. Here, we isolated nine H5N1 HPAI viruses from domestic poultry farms and slaughterhouses in Cambodia during 2018-2019 and performed phylogenetic analysis of whole genome sequences. All isolates were classified as H5 clade 2.3.2.1c viruses and all harbored multi-basic amino acid sequences (PQRERRRKR/GLF) at the haemagglutinin (HA) cleavage site. Phylogenetic analysis revealed that the H5N1 isolates in this study belonged to the KH2 genotype, the dominant genotype in Cambodia in 2015. Phylogenetic analysis of the HA gene showed that the isolates were divided into two groups (A and B). The results of Bayesian discrete phylogeography analysis revealed that the viral migration pathways from Vietnam to Cambodia (Bayes factor value: 734,039.01; posterior probability: 1.00) and from Cambodia to Vietnam (Bayes factor value: 26,199.95; posterior probability: 1.00) were supported by high statistical values. These well-supported viral migrations between Vietnam and Cambodia demonstrate that viral transmission continued in both directions. Several factors may have contributed to this, including the free-grazing duck system and movement of poultry-related products. Thus, the results emphasize the need for an enhanced international surveillance program to better understand transboundary infection and evolution of H5N1 HPAI viruses, along with implementation of more stringent international trade controls on poultry and poultry products.

Transmission of highly pathogenic avian influenza in the nomadic free-grazing duck production system in Viet Nam

The presence of free-grazing ducks (FGD) has consistently been shown to be associated with highly pathogenic avian influenza virus (HPAIV) H5N1 outbreaks in South-East Asia. However, the lack of knowledge about the transmission pathways limits the effectiveness of control efforts. To address this gap, we developed a probabilistic transmission model of HPAIV H5N1 in the nomadic FGD production system in Viet Nam, assuming different scenarios to address parameter uncertainty. Results suggested that HPAIV H5N1 could spread within the nomadic FGD production system, with an estimated flock-level effective reproduction number (re) ranging from 2.16 (95% confidence interval (CI): 1.39-3.49) to 6.10 (95%CI: 3.93-9.85) depending on the scenario. Indirect transmission via boats and trucks was shown to be the main transmission route in all scenarios. Results suggest that re could be reduced below one with 95% confidence if 86% of FGD flocks were vaccinated in the best-case scenario or 95% in the worst-case scenario. If vaccination was combined with cleaning and disinfection of transport vehicles twice a week, vaccination coverage could be lowered to 60% in the best-case scenario. These findings are of particular relevance for prioritising interventions for effective control of HPAIV in nomadic free-grazing duck production systems.

Pb, Cd, and Cu Play a Major Role in Health Risk from Contamination in Duck Meat and Offal for Food Production in Thailand.

Zinc, Pb, Cd, Mn, Fe, Cr, and Cu levels in duck meat from large-scale farms have been found to be significantly higher than those from free-grazing duck farms. Zinc, Co, Mn, Cr, and Cu contamination levels in duck liver from large-scale farms were significantly higher than those from free-grazing farms; only Cd in duck liver from free-grazing farms was higher than in liver samples from large-scale farms at P < 0.05. Lead, Cd, Fe, and Cr levels in duck intestine samples from free-grazing farms were higher than large-scale farms at P < 0.001. Moreover, the average concentrations of Pb in duck meat and liver samples from large-scale farms and Cd levels in duck liver samples from free-grazing farm also exceeded the FAO/WHO and Codex Alimentarius limits by 100% (55/55), 100% (54/54), and 67.6% (23/34), respectively. PCA analysis showed a strong positive relationship between the eight metals in meat, liver, and intestine was > 0.69, > 0.69, and > 0.72, in order. The relationship of the liver combined with the intestine was > 0.65. This study indicated that consumers may incur health risks from long-term consumption of duck due to high Pb and Cd concentrations from both types of farms, particularly from large-scale duck farms.

Isolation of Avian Influenza A (H5N2) from Free-Grazing Ducks in Thailand and Antiviral Effects of Tea Extracts on Viral Propagation

Isolation of Avian Influenza A (H5N2) from Free-Grazing Ducks in Thailand and Antiviral Effects of Tea Extracts on Viral Propagation

Serological evidence of duck Tembusu virus infection in free-grazing ducks, Thailand.

Duck Tembusu virus (DTMUV) has been reported in ducks raised in farming system since its emergence in 2010. No information is available on DTMUV infection in free-grazing ducks, which are commonly raised and widespread in several Asian countries. To determine the presence of DTMUV infection in free-grazing ducks in Thailand, retrospective serum samples collected from 1,000 free-grazing ducks during 2008-2015 were tested for DTMUV infection. Our result showed that 91 (9.10%) were positive for DTMUV neutralizing antibodies and DTMUV seropositive ducks have been detected in Thailand since 2008. To further investigate the seroprevalence and geographic distribution of DTMUV infection in free-grazing ducks in Thailand, a cross-sectional serological survey of DTMUV was conducted in 2016. Of 1,200 free-grazing ducks in the 60 flocks from 20 provinces located in the major free-grazing duck raising areas of Thailand, 365 (30.42%) were positive for DTMUV neutralizing antibodies and 56 flocks (93.33%) had at least one DTMUV seropositive duck. Additionally, DTMUV seropositive ducks were observed in all provinces tested. In conclusion, our data demonstrated the presence of DTMUV infection in free-grazing ducks since 2008 and widespread DTMUV infection in free-grazing ducks in Thailand with a relatively high seroprevalence. These findings suggest the potential role of free-grazing ducks in the dissemination of DTMUV and highlight the necessity of systemic DTMUV surveillance in free-grazing ducks in addition to farm ducks for early detection, prevention, and control of this emerging disease.

After the livestock revolution

Since the 1970s, virologists have pointed to South China as a hypothetical ‘epicenter’ of influenza pandemics. In particular, several key studies highlighted the farming practice of ‘free-grazing’ ducks (fangyang) as the crucial ecological factor driving the emergence of new flu viruses. Following the emergence of highly pathogenic avian influenza viruses in 1997 and 2004, free-grazing ducks became a primary target of biosecurity interventions from global health agencies and China’s national government. This article compares the global health ‘problematization’ of free-grazing ducks as a pandemic threat with the manner in which duck farmers around Poyang Lake, China, engage with the dangers of disease in their flocks. Showing how both global health experts and duck farmers configure the uncertainty of disease against ideal modes of ordering the relations among species, I conclude by examining how these two problematizations interact in ways that mutually intensify – rather than moderate – uncertainty.

Comparison of zinc, lead, cadmium, cobalt, manganese, iron, chromium and copper in duck eggs from three duck farm systems in Central and Western, Thailand

This was a comparative study of the heavy metal levels (Zn, Pb, Cd, Co, Mn, Fe, Cr and Cu) in eggs from free grazing duck, small-scale, and large-scale farms in central and western regions of Thailand. A questionnaire was used to gather demographic data for the analysis of heavy metal contamination in feed, drinking water and wastewater. The correlation between the amounts of heavy metal contamination in eggs was studied against the heavy metals found in feed, drinking water and wastewater. The levels of Pb, Cd, Cr and Cu in eggs from large-scale farms were significantly higher than small farms and free grazing farms at P < 0.001. Zn in eggs from free grazing farms was higher than in the small farms and large-scale farms sampled. The contamination of Pb in eggs from all types of farms exceeded the standard limits of ACFS 6703–2005. The average levels of Pb in the eggs from small-scale farms correlated significantly with the level of Pb found in the feed at P < 0.05, while the average levels of Pb in eggs from free grazing duck farms correlated significantly with the levels of Pb found in the drinking water at P < 0.05. Additionally, the average level of Cu in duck egg from large-scale farms correlated significantly with the level of Cu found in the feeds at P < 0.001. Furthermore, from a calculation of the provisional tolerable daily intake (WHO-FAO) of heavy metals in this study, it was concluded that consumers face health risks from Cd contamination. Thus, heavy metal contamination, especially Pb and Cd in duck egg, must be of concern due to the health risks and the route of crucial heavy metals contamination should be elucidated and long - term monitoring of heavy metals posing health effects in farm systems should be carried out.

Heavy Metal (Cd and Pb) and Aflatoxin Contamination in Tissues and Eggs from Free Grazing Ducks and Their Environment in Central Thailand.

The cross-sectional study of heavy metals and aflatoxins was conducted by studying duck egg, blood, liver, feed, and water samples from 11 free grazing farms. The duck feed, soil, and rice samples were lower than the standard limit for aflatoxins at 20ngg-1. The highest levels of aflatoxin were detected in the liver, intestine, and egg yolk; these were 3.04, 1.73, and 4.56ngg-1 respectively, while the average levels were 1.6 ± 0.73, 1.31 ± 0.23, and 1.87 ± 0.99ngg-1, respectively. Interestingly, aflatoxin was not detected in any of the egg white albumin samples (90/90 samples), whereas aflatoxin contamination was predominantly found in the yolk. Additionally, the means and standard deviations of Pb and Cd found in the duck eggs were 118.61 ± 22.25 and 13.84 ± 9.06ngg-1 respectively. The maximum levels of Pb and Cd in eggs were 134.34 and 29.72ngg-1, respectively. Moreover, Pb contamination occurred in the duck liver tissue in 93.61% (88/94) of the samples, whereas Cd contamination was found in 100% (100/100). The maximum levels of Pb and Cd in the duck liver tissues were 606.16 and 22,946.20ngg-1, which was higher than those in the eggs. Pb contamination in the water from rice paddy fields after grazing was significantly higher than that in water samples taken before grazing. This is the first report of Pb and Cd contamination in blood, egg, and liver samples of free grazing ducks in Thailand.

Trade patterns facilitating highly pathogenic avian influenza virus dissemination in the free-grazing layer duck system in Vietnam.

Highly pathogenic avian influenza (HPAI) viruses continue to threaten smallholder poultry producers in several South-east Asian countries, including Vietnam. In particular, the free-grazing duck system has been repeatedly highlighted as a major risk factor for HPAI outbreaks. Free-grazing ducks, which scavenge on rice paddies after the harvest, account for a large proportion of the duck population in Vietnam and the wider South-east Asian region. However, the structure and dynamics of the free-grazing duck production from farm to consumption has not been described for Vietnam. In this study, we used a value chain approach to provide a complete picture of the actors involved in the production and marketing of free-grazing duck eggs and spent layer ducks, as well as to investigate the governance structure of this food system. Group interviews and key informant interviews were conducted in two provinces located in the Mekong River Delta (MRD) and the Red River Delta (RRD). The results presented here highlight similarities and differences in farming and trade practices between the two provinces. The trade of spent layer ducks involved large volumes of live ducks being sent to China and Cambodia for consumption, generating a substantial risk of transboundary spread of pathogens, including HPAI viruses. We describe the major role of "duck yards", which act as hubs in the northbound trade of spent layer ducks. These yards should be considered as essential links in the value chain of spent layer ducks when considering HPAI surveillance and control. The veterinary authorities are only marginally involved in the value chain activities, and their influence could be strengthened by increasing surveillance activities for instance in duck yards. Last, we discuss the dynamics of the duck value chain and further implications for future HPAI management policies.

Movement and contact patterns of long-distance free-grazing ducks and avian influenza persistence in Vietnam.

Presence of ducks, and in particular of free-grazing ducks, has consistently been shown to be one of the most important risk factors for highly pathogenic avian influenza outbreaks which has compromised poultry production in South-East Asia since the early 2000s and continues to threaten public health, farmers’ livelihood and food security. Although free-grazing duck production has been practised for decades in South-East Asia, there are few published studies describing this production system, which is suspected to play an important role in the maintenance of avian influenza viruses. This study aimed at describing quantitatively the long-distance free-grazing duck production system in South Vietnam, characterising the movement and contact patterns of the duck flocks, and identifying potential associations between farming practices, movement and contact patterns and the circulation of avian influenza viruses. We conducted interviews among stakeholders involved in the free-grazing duck production system (duck farmers, transporters and rice paddy owners) in combination with a virological cross-sectional survey in South Vietnam. Results show that both direct and indirect contacts between free-grazing duck flocks were frequent and diverse. The flocks were transported extensively across district and province boundaries, mainly by boat but also by truck or on foot. A third of the investigated flocks had a positive influenza A virology test, indicating current circulation of avian influenza viruses, but none were positive for H5 subtypes. The age and size of the flock as well as its location at the time of sampling were associated with the risk of influenza A circulation in the flocks. These findings should be considered when developing risk assessment models of influenza virus spread aimed at informing the development of improved biosecurity practices leading to enhanced animal health, sustainable animal production and reliable income for farmers.

Antimicrobial susceptibility of lactic acid bacteria isolated from human and food-producing animal feces in Khon Kaen Province, Thailand

The aim of this study was to investigate the susceptibility of 93 Lactobacillus strains to seven antimicrobial agents, i.e., penicillin G, amoxicillin-clavulanic acid, vancomycin, tetracycline, streptomycin, ciprofloxacin, and sulfamethoxazole-trimethoprim, by disk diffusion test. The Lactobacillus strains were isolated from fecal samples taken from 90 healthy, food-producing animals (fattening pigs, free-grazing ducks, and beef cattle) and 30 healthy human subjects (1- to 6-year-olds) in Khon Kaen. The minimum inhibitory concentration (MIC) values of tetracycline and ciprofloxacin against all strains were determined using the E-test. All 93 Lactobacillus isolates were identified at the species level using 16S rRNA gene sequencing. The most common species of Lactobacillus isolated from fattening pigs, free-grazing ducks, beef cattle, and humans were L. reuteri (30%), L. salivarius (46.7%), L. acetotolerans (20%), and L. gasseri (33.3%), respectively. A total of 83 Lactobacillus strains were resistant to the examined antibiotics. Some strains were resistant to two to six types of antibiotics. More than 50% of Lactobacillus species were intrinsically resistant to vancomycin, streptomycin, ciprofloxacin, and sulfamethoxazole-trimethoprim. The prevalence of acquired resistance to tetracycline was observed for Lactobacillus isolates from fattening pigs, humans, free-grazing ducks, and beef cattle at 92.3, 85.7, 77.8, and 68.4%, respectively. These results demonstrate the impact of antibiotic use in human and veterinary medicine on antibiotic treatment efficacy and may support the spread of transferable antibiotic resistant genes to other bacteria via the food chain.

Genetic characterization of influenza A virus subtypes H1N3 and H1N9 isolated from free-grazing ducks in Thailand.

Influenza A virus (IAV) subtype H1 has been reported to infect birds, pigs and humans. In this study, we characterized IAVs subtype H1N3 and H1N9 isolated from free-grazing ducks in Thailand. Phylogenetic analysis showed that Thai IAV-H1 isolates cluster with avian Eurasian-lineage but not pandemic H1N1 viruses. Analysis of the viruses indicated low-pathogenic avian influenza (LPAI) characteristics. This study is the first report of avian H1N3 and H1N9 in Thailand. Although Thai IAV-H1 viruses do not pose a risk of a pandemic, routine surveillance and genetic monitoring of IAVs should be conducted.