Formation Of Prebiotic Molecules Research Articles

Carbon‐ and Nitrogen‐Based Complexes as Photocatalysts for Prebiotic and Oxygen Chemistry during Earth Evolution

AbstractSunlight has long served as primary energy source on our planet, shaping the behavior of living organisms. Extensive research has been dedicated to unraveling the evolutionary pathways involved. When the formation of Earth atmosphere, it primarily consisted of small gas molecules, which are considered crucial for the emergence of life. Recent demonstrations have shown that these molecules can also be transformed into semiconductors, with the potential to harness solar energy and catalyze chemical reactions as photocatalysts. Building upon this research, this minireview focuses on the potential revolutionary impact of photocatalysis on Earth. Initially, it examines key reactions, such as the formation of prebiotic molecules and the oxygen evolution reaction via water oxidation. Additionally, various C−N complexes in photocatalysts are explored, showcasing their roles in catalyzing chemical reactions. The conclusion and outlook provide a potential pathway for the evolution of Earth, shedding light on the significance of metal‐free photocatalysts in development of Earth.

Mapping Physical Conditions in Neighboring Hot Cores: NOEMA Studies of W3(H2O) and W3(OH)

The complex chemistry that occurs in star-forming regions can provide insight into the formation of prebiotic molecules at various evolutionary stages of star formation. To study this process, we present millimeter-wave interferometric observations of the neighboring hot cores W3(H2O) and W3(OH) carried out using the NOEMA interferometer. We have analyzed distributions of six molecules that account for most observed lines across both cores and have constructed physical parameter maps for rotational temperature, column density, and velocity field with corresponding uncertainties. We discuss the derived spatial distributions of these parameters in the context of the physical structure of the source. We propose the use of HCOOCH3 as a new temperature tracer in W3(H2O) and W3(OH) in addition to the more commonly used . By analyzing the physically derived parameters for each molecule across both W3(H2O) and W3(OH), the work presented herein further demonstrates the impact of physical environment on hot cores at different evolutionary stages.

Detection of interstellar cyanamide (NH$$_{2}$$CN) towards the hot molecular core G10.47$$+$$0.03

In the interstellar medium, the amide-type molecules play an important role in the formation of the prebiotic molecules in the hot molecular cores or high-mass star formation regions. The complex amide-related molecule cyanamide (NH$_{2}$CN) is known as one of the rare interstellar molecule which has played a major role in the formation of urea (NH$_{2}$CONH$_{2}$). In this article, we presented the detection of the emission lines of cyanamide (NH$_{2}$CN) towards the hot molecular core G10.47+0.03 between the frequency range 158.49$-$160.11 GHz using the Atacama Large Millimeter/submillimeter Array (ALMA) interferometric radio telescope. The estimated column density of the emission lines of NH$_{2}$CN using the rotational diagram model was $N$(NH$_{2}$CN) = (6.60$\pm$0.1)$\times$10$^{15}$ cm$^{-2}$ with rotational temperature ($T_{rot}$) = 201.2$\pm$3.3 K. The fractional abundance of NH$_{2}$CN with respect to H$_{2}$ towards G10.47+0.03 was $f$(NH$_{2}$CN) = 5.076$\times$10$^{-8}$. Additionally, we estimated the NH$_{2}$CN/NH$_{2}$CHO abundance ratio towards the G10.47+0.03 was 0.170, which was nearly similar with NH$_{2}$CN/NH$_{2}$CHO abundance ratio towards IRAS 16293$-$2422 B and Sgr B2 (M). We found that the observed abundance of NH$_{2}$CN with respect to H$_{2}$ towards G10.47+0.03 fairly agrees with the theoretical value predicted by Garrod (2013). We also discussed the possible formation and destruction pathways of NH$_{2}$CN.

Methylenimine and cyanomethanimine synthesis from ion irradiation of N2-CH4 ice: Implication on the formation of prebiotic molecules in outer solar system bodies

The synthesis of methylenimine and cyanomethanimine from ion irradiation of N2-CH4 ice was studied, in an attempt to simulate the role of medium mass cosmic rays and energetic solar particles in the processing of nitrogen-rich ices on cold astrophysical environments, such as those in the outer region of the solar system (e.g. Pluto, Charon, Triton, Makemake and Titan). The N2-CH4 (90:10) ice mixture was irradiated at 9 K by 38.4 MeV 40Ca9+ (0.96 MeV/u) at the GANIL facility (Caen/Fance). The evolution of the samples was monitored using in-situ Fourier transform infrared spectroscopy (FTIR). The results indicate the formation of CH2NH and CH2NCN, which are considered species of interest in prebiotic chemistry. Other species produced by radiolysis were HCN, HNC, hydrocarbons and nitriles. Direct comparison of the laboratory spectrum from the mixture of reaction products provides an efficient way to focus on the identification of chemical synthesis routes for the production of molecules important in the development of life that are consistent with the chemical inventory and physical conditions on frozen moons and cold objects in the outer solar system.

Protostars: Forges of cosmic rays?

Galactic cosmic rays (CR) are particles presumably accelerated in supernova remnant shocks that propagate in the interstellar medium up to the densest parts of molecular clouds, losing energy and their ionisation efficiency because of the presence of magnetic fields and collisions with molecular hydrogen. Recent observations hint at high levels of ionisation and at the presence of synchrotron emission in protostellar systems, which leads to an apparent contradiction. We want to explain the origin of these CRs accelerated within young protostars as suggested by observations. Our modelling consists of a set of conditions that has to be satisfied in order to have an efficient CR acceleration through diffusive shock acceleration. We analyse three main acceleration sites, then we follow the propagation of these particles through the protostellar system up to the hot spot region. We find that jet shocks can be strong accelerators of CR protons, which can be boosted up to relativistic energies. Other promising acceleration sites are protostellar surfaces, where shocks caused by impacting material during the collapse phase are strong enough to accelerate CR protons. In contrast, accretion flow shocks are too weak to efficiently accelerate CRs. Though CR electrons are weakly accelerated, they can gain a strong boost to relativistic energies through re-acceleration in successive shocks. We suggest a mechanism able to accelerate both CR protons and electrons through the diffusive shock acceleration mechanism, which can be used to explain the high ionisation rate and the synchrotron emission observed towards protostellar sources. The existence of an internal source of energetic particles can have a strong and unforeseen impact on the ionisation of the protostellar disc, on the star and planet formation processes, and on the formation of pre-biotic molecules.

Cosmic-ray acceleration in young protostars

The main signature of the interaction between cosmic rays and molecular clouds is the high ionisation degree. This decreases towards the densest parts of a cloud, where star formation is expected, because of energy losses and magnetic effects. However recent observations hint to high levels of ionisation in protostellar systems, therefore leading to an apparent contradiction that could be explained by the presence of energetic particles accelerated within young protostars. Our modelling consists of a set of conditions that has to be satisfied in order to have an efficient particle acceleration through the diffusive shock acceleration mechanism. We find that jet shocks can be strong accelerators of protons which can be boosted up to relativistic energies. Another possibly efficient acceleration site is located at protostellar surfaces, where shocks caused by impacting material during the collapse phase are strong enough to accelerate protons. Our results demonstrate the possibility of accelerating particles during the early phase of a proto-Solar-like system and can be used as an argument to support available observations. The existence of an internal source of energetic particles can have a strong and unforeseen impact on the star and planet formation process as well as on the formation of pre-biotic molecules.

Electrostatic activation of prebiotic chemistry in substellar atmospheres

AbstractCharged dust grains in the atmospheres of exoplanets may play a key role in the formation of prebiotic molecules, necessary to the origin of life. Dust grains submerged in an atmospheric plasma become negatively charged and attract a flux of ions that are accelerated from the plasma. The energy of the ions upon reaching the grain surface may be sufficient to overcome the activation energy of particular chemical reactions that would be unattainable via ion and neutral bombardment from classical, thermal excitation. As a result, prebiotic molecules or their precursors could be synthesized on the surface of dust grains that form clouds in exoplanetary atmospheres. This paper investigates the energization of the plasma ions, and the dependence on the plasma electron temperature, in the atmospheres of substellar objects such as gas giant planets. Calculations show that modest electron temperatures of ≈1 eV (≈104 K) are enough to accelerate ions to sufficient energies that exceed the activation energies required for the formation of formaldehyde, ammonia, hydrogen cyanide and the amino acid glycine.

Formation and characterization of VUV photolytically-induced (NH2)(NH3)n aggregates, 0 ≤ n ≤ 3

The formation of amidogen radical may be an important precursor toward the formation of prebiotic molecules on the surface of ice grains in interstellar clouds. Many laboratory experiments aimed at characterizing the photolysis of ammonia. Wide shifts were observed between the solid phase and the gas phase experiments, suggesting the presence of aggregates in solid phase experiments. We attempt to characterize the formation of aggregates between amidogen radical and ammonia during the VUV irradiation of ammonia. To this end Fourier transform infrared (FTIR) spectroscopy was used in combination with the matrix isolation technique in order to characterize species formed during the photolysis of ammonia. The experimental IR spectra were compared with the theoretical frequencies obtained from post Hartree–Fock and DFT calculations for the amidogen radical and its complexes with ammonia molecules. Experimentally, the matrix isolation technique allow us to observe several bands due to the formation of (NH2)(NH3)n complexes. These bands are assigned thanks to the theoretical calculations.

Early Solar System hydrothermal activity in chondritic asteroids on 1–10-year timescales

Chondritic meteorites are considered the most primitive remnants of planetesimals from the early Solar System. As undifferentiated objects, they also display widespread evidence of water-rock interaction on the parent body. Understanding this history has implications for the formation of planetary bodies, the delivery of water to the inner Solar System, and the formation of prebiotic molecules. The timescales of water-rock reactions in these early objects, however, are largely unknown. Here, we report evidence for short-lived water-rock reactions in the highly metamorphosed ordinary chondrite breccia Villalbeto de la Peña (L6). An exotic clast (d = 2cm) has coexisting variations in feldspar composition and oxygen isotope ratios that can only result from hydrothermal conditions. The profiles were modeled at T = 800 °C and P(H(2)O) = 1 bar using modified grain-boundary diffusion parameters for oxygen self-diffusion and reaction rates of NaSiCa(-1)Al(-1) exchange in a fumarole. The geochemical data are consistent with hydrothermal activity on the parent body lasting only 1-10 y. This result has wide-ranging implications for the geological history of chondritic asteroids.

Functional and Structural Characterization of α-(1→2) Branching Sucrase Derived from DSR-E Glucansucrase

ΔN(123)-glucan-binding domain-catalytic domain 2 (ΔN(123)-GBD-CD2) is a truncated form of the bifunctional glucansucrase DSR-E from Leuconostoc mesenteroides NRRL B-1299. It was constructed by rational truncation of GBD-CD2, which harbors the second catalytic domain of DSR-E. Like GBD-CD2, this variant displays α-(1→2) branching activity when incubated with sucrose as glucosyl donor and (oligo-)dextran as acceptor, transferring glucosyl residues to the acceptor via a ping-pong bi-bi mechanism. This allows the formation of prebiotic molecules containing controlled amounts of α-(1→2) linkages. The crystal structure of the apo α-(1→2) branching sucrase ΔN(123)-GBD-CD2 was solved at 1.90 Å resolution. The protein adopts the unusual U-shape fold organized in five distinct domains, also found in GTF180-ΔN and GTF-SI glucansucrases of glycoside hydrolase family 70. Residues forming subsite -1, involved in binding the glucosyl residue of sucrose and catalysis, are strictly conserved in both GTF180-ΔN and ΔN(123)-GBD-CD2. Subsite +1 analysis revealed three residues (Ala-2249, Gly-2250, and Phe-2214) that are specific to ΔN(123)-GBD-CD2. Mutation of these residues to the corresponding residues found in GTF180-ΔN showed that Ala-2249 and Gly-2250 are not directly involved in substrate binding and regiospecificity. In contrast, mutant F2214N had lost its ability to branch dextran, although it was still active on sucrose alone. Furthermore, three loops belonging to domains A and B at the upper part of the catalytic gorge are also specific to ΔN(123)-GBD-CD2. These distinguishing features are also proposed to be involved in the correct positioning of dextran acceptor molecules allowing the formation of α-(1→2) branches.