Fluorescent Protein Chromophore Anion Research Articles

A photoelectron imaging and quantum chemistry study of the deprotonated cyan fluorescent protein chromophore anion

Cyan fluorescent protein (CFP), a blue-shifted analogue of green fluorescent protein, is used widely as a fluorescence resonance energy transfer donor in live cell fluorescence imaging. Here, we use a combination of anion photoelectron spectroscopy experiments and quantum chemistry calculations to probe the electronic structure of the CFP chromophore in its deprotonated anionic form. The vertical detachment energy measured as the maximum in the photoelectron spectrum is eV, which is an improvement on our earlier measurement. We see evidence for competing internal conversion following resonant excitation of electronically excited states of the anion lying in the detachment continuum. We find that the first electronically excited valence state of the anion lies very close to the detachment threshold, supporting the conclusions of gas-phase photodestruction action spectroscopy measurements, and that the second electronically excited valence state lies around 1.25 eV above the detachment threshold. These electronic states have shape resonance character and mixed excited shape and Feshbach resonance character, respectively.

The Effect of an Electric Field on the Spectroscopic Properties of the Isolated Green Fluorescent Protein Chromophore Anion

AbstractThe front cover artwork is provided by the groups of Profs. Lars H. Andersen and Steen Brøndsted Nielsen, both at Aarhus University. The image shows the Green Fluorescent Protein as a jigsaw puzzle. The chromophore is colored blue and experiences a high electric field at one end. Read the full text of the Communication at 10.1002/cphc.201800225.

Front Cover: The Effect of an Electric Field on the Spectroscopic Properties of the Isolated Green Fluorescent Protein Chromophore Anion (ChemPhysChem 14/2018)

Front Cover: The Effect of an Electric Field on the Spectroscopic Properties of the Isolated Green Fluorescent Protein Chromophore Anion (ChemPhysChem 14/2018)

The Effect of an Electric Field on the Spectroscopic Properties of the Isolated Green Fluorescent Protein Chromophore Anion.

Here we uncover the direct effect of a high electric field on the absorption by the Green Fluorescent Protein chromophore anion isolated in vacuo based on gas-phase action spectroscopy. Betaine is a strong molecular dipole that creates an electric field of ∼70 MV/cm when attached to the ion at the phenolate oxygen, more than half the actual field from the protein matrix and pointing in the same direction. Nevertheless, the shift in absorption is limited (0.08 eV), supporting earlier conclusions, but subject to much debate, that the protein is rather innocent in perturbing the transition energy. The betaine complexes are readily made by electrospray ionization and in contrast to the bare ions, they dissociate after one-photon absorption. Also, electron detachment is not an open channel complicating the bare ion case. As steric constraints are absent in vacuo, the possibility of turning on fluorescence by an electric field can be tested from experiments on complexes with betaine.

Direct monitoring of photon induced isomerization, dissociation and electron detachment of the green fluorescent protein chromophore anion

SynopsisWe present the first experimental demonstration of Z↔E photoisomerization the GFP chromophore anion, HBDI−, in the gas phase. In the single photon absorption regime, the photoisomerization action spectra show two maxima at 480 nm and 455 nm. In the multiphoton absorption regime, photodissociation and photodetachment channels modify the appearance of the photoisomerization band. This work provides a new approach to characterize photoisomerization pathways in biomolecular ions.

Excited state dynamics of the isolated green fluorescent protein chromophore anion following UV excitation.

A combined frequency-, angle-, and time-resolved photoelectron spectroscopy study is used to unravel the excited state dynamics following UV excitation of the isolated anionic chromophore of the green fluorescent protein (GFP). The optically bright S3 state, which is populated for hv > 3.7 eV, is shown to decay predominantly by internal conversion to the S2 state that in turn autodetaches to the neutral ground state. For hv > 4.1 eV, a new and favorable autodetachment channel from the S2 state becomes available, which leads to the formation of the neutral in an excited state. The results indicate that the UV excited state dynamics of the GFP chromophore involve a number of strongly coupled excited states.

Non-adiabatic dynamics of isolated green fluorescent protein chromophore anion.

On-the-fly ab initio molecular dynamics calculations have been performed to investigate the relaxation mechanism of green fluorescent protein chromophore anion under vacuum. The CASSCF surface hopping simulation method based on Zhu-Nakamura theory is applied to present the real-time conformational changes of the target molecule. The static calculations and dynamics simulation results suggest that not only the twisting motion around bridging bonds between imidazolinone and phenoxy groups but the strength mode of C=O and pyramidalization character of bridging atom are major factors on the ultrafast fluorescence quenching process of the isolated chromophore anion. The abovementioned factors bring the molecule to the vicinity of conical intersections on its potential energy surface and to finish the internal conversion process. A Hula-like twisting pattern is displayed during the relaxation process and the entire decay process disfavors a photoswitching pattern which corresponds to cis-trans photoisomerization.

Diabatic Population Matrix Formalism for Performing Molecular Mechanics Style Simulations with Multiple Electronic States.

An accurate description of nonbonded interactions is important in investigating dynamics of molecular systems. In many situations, fixed point charge models are successfully applied to explaining various chemical phenomena. However, these models with conventional formulations will not be appropriate in elucidating the detailed dynamics during nonadiabatic events. This is mainly because the chemical properties of any molecule, especially its electronic populations, significantly change with respect to molecular distortions in the vicinity of the surface crossing. To overcome this issue in molecular simulations yet within the framework of the fixed point charge model, we define a diabatic electronic population matrix and substitute it for the conventional adiabatic partial charges. We show that this matrix can be readily utilized toward attaining more reliable descriptions of Coulombic interactions, in combination with the interpolation formalism for obtaining the intramolecular interaction potential. We demonstrate how the mixed formalism with the diabatic charges and the interpolation can be applied to molecular simulations by conducting adiabatic and nonadiabatic molecular dynamics trajectory calculations of the green fluorescent protein chromophore anion in aqueous environment.

Competition between photodetachment and autodetachment of the 2(1)ππ* state of the green fluorescent protein chromophore anion.

Using a combination of photoelectron spectroscopy measurements and quantum chemistry calculations, we have identified competing electron emission processes that contribute to the 350-315 nm photoelectron spectra of the deprotonated green fluorescent protein chromophore anion, p-hydroxybenzylidene-2,3-dimethylimidazolinone. As well as direct electron detachment from S0, we observe resonant excitation of the 2(1)ππ* state of the anion followed by autodetachment. The experimental photoelectron spectra are found to be significantly broader than photoelectron spectrum calculated using the Franck-Condon method and we attribute this to rapid (∼10 fs) vibrational decoherence, or intramolecular vibrational energy redistribution, within the neutral radical.

Photodetachment Spectra of Deprotonated Fluorescent Protein Chromophore Anions

Isolated model anion chromophores of the green and cyan fluorescent proteins were generated in an electrospray ion source, and their photodetachment spectra were recorded using photoelectron imaging. Vertical photodetachment energies of 2.85(10) and 4.08(10) eV have been measured for the model green fluorescent protein chromophore anion, corresponding to photodetachment from the ground electronic state of the anion to the ground and first excited electronic states of the radical, respectively. For the model cyan fluorescent protein chromophore anion, vertical photodetachment energies of 2.88(10) and 3.96(10) eV have been measured, corresponding to detachment from the ground electronic state of the anion to the ground and first excited electronic states of the neutral radical, respectively. We also find evidence suggesting that autoionization of electronically excited states of the chromophore anions competes with direct photodetachment. For comparison and to benchmark our measurements, the vertical photodetachment energies of deprotonated phenol and indole anions have also been recorded and presented. Quantum chemistry calculations support our assignments. We discuss our results in the context of the isolated protein chromophore anions acting as electron donors, one of their potential biological functions.

Relaxation of green fluorescent protein chromophore anion observed by photodissociation in an electrostatic storage ring

The gas-phase absorption properties of the green fluorescent protein chromophore anion were studied using an electrostatic storage ring. The time sequence of neutral particles produced by photodissociation was detected following laser irradiation. The lifetimes of the photo-absorbed ions depended on their storage time in an ion trap before injection into the storage ring. The lifetime increased with the storage time and saturated, indicating a change in the population of rovibrationally excited states with respect to the storage time. Photodissociation neutral spectrum of the relaxed ions measured as a function of the laser wavelength was characterized by a narrow asymmetric shape, which was in good agreement with the photo fragment ion action spectrum reported recently.

Absorption of the green fluorescent protein chromophore anion in the gas phase studied by a combination of FTICR mass spectrometry with laser-induced photodissociation spectroscopy

The optical absorption of the green fluorescent protein chromophore anion (HBDI −) in the gas phase has been addressed by a number of experimental and theoretical studies; however, there is no consensus on its spectral characteristics yet. In this report, the intrinsic absorption of HBDI − was probed by photo-induced dissociation (“action”) spectroscopy using discrete lines of a continuous-wave (CW) laser source. The observed spectral profile of dissociation efficiency revealed a pronounced dependence on the laser irradiance. Dissociation at high irradiance is governed by multiple-photon absorption processes whose efficiency peaks between 476 and 488 nm. At very low irradiance (<0.4 mW cm −2) dissociation of gas-phase HBDI − is mostly promoted by single-photon transitions and suggests an intrinsic absorption maximum of gas-phase HBDI − <476 nm, blue-shifted compared to earlier results obtained with pulsed lasers.